FFCP PHASE1:Hg19::chr3:15563155..15563181,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8292 | |EntrezGene=8292 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2226 | |HGNC=2226 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=61bp_to_ENST00000383786_5end | |association_with_transcript=61bp_to_ENST00000383786_5end | ||
|cluster_id=chr3:15563155..15563181,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_2_at_COLQ_5end | |description=CAGE_peak_2_at_COLQ_5end | ||
|id=chr3:15563155..15563181,- | |id=chr3:15563155..15563181,- | ||
|ontology_enrichment_celltype=CL:0002057!1.65e-22!42;CL:0000860!2.06e-20!45;CL:0000763!3.43e-19!112;CL:0000049!3.43e-19!112;CL:0000037!1.53e-17!172;CL:0000566!1.53e-17!172;CL:0002032!1.85e-16!165;CL:0000837!1.85e-16!165;CL:0000766!2.12e-16!76;CL:0000839!2.72e-16!70;CL:0002194!3.52e-16!63;CL:0000576!3.52e-16!63;CL:0000040!3.52e-16!63;CL:0000559!3.52e-16!63;CL:0000988!1.21e-15!182;CL:0002009!2.11e-15!65;CL:0002087!6.82e-14!119;CL:0000557!2.42e-13!71;CL:0000738!3.97e-13!140;CL:0002031!2.51e-12!124 | |ontology_enrichment_celltype=CL:0002057!1.65e-22!42;CL:0000860!2.06e-20!45;CL:0000763!3.43e-19!112;CL:0000049!3.43e-19!112;CL:0000037!1.53e-17!172;CL:0000566!1.53e-17!172;CL:0002032!1.85e-16!165;CL:0000837!1.85e-16!165;CL:0000766!2.12e-16!76;CL:0000839!2.72e-16!70;CL:0002194!3.52e-16!63;CL:0000576!3.52e-16!63;CL:0000040!3.52e-16!63;CL:0000559!3.52e-16!63;CL:0000988!1.21e-15!182;CL:0002009!2.11e-15!65;CL:0002087!6.82e-14!119;CL:0000557!2.42e-13!71;CL:0000738!3.97e-13!140;CL:0002031!2.51e-12!124 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.08e-29;33!CL:0002057;1.08e-29;33!CL:0000473;7.73e-21;39!CL:0000234;7.73e-21;39!CL:0000576;1.23e-17;48!CL:0000764;2.22e-11;2!CL:0000558;2.22e-11;2!CL:0000766;2.06e-10;69!CL:0000763;3.58e-08;100!CL:0000623;1.72e-07;3!CL:0000767;3.23e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.89e-27,42;CL:0002057,4.89e-27,42;CL:0000473,3.35e-23,48;CL:0000234,3.35e-23,48;CL:0000763,6.15e-21,108;CL:0000049,6.15e-21,108;CL:0000839,3.02e-20,66;CL:0000766,4.97e-18,72;CL:0002194,7.75e-18,59;CL:0000576,7.75e-18,59;CL:0000040,7.75e-18,59;CL:0000559,7.75e-18,59;CL:0002009,3.81e-17,61;CL:0002032,1.99e-16,161;CL:0000837,1.99e-16,161;CL:0000037,1.69e-15,168;CL:0000557,2.57e-15,67;CL:0000988,2.06e-14,177;CL:0002031,1.78e-13,120;CL:0000764,2.22e-11,2;CL:0000765,2.22e-11,2;CL:0000050,2.22e-11,2;CL:0000038,2.22e-11,2;CL:0000558,2.22e-11,2;CL:0000547,2.22e-11,2;CL:0000549,2.22e-11,2;CL:0000550,2.22e-11,2;CL:0000552,2.22e-11,2;CL:0002087,3.06e-11,115;CL:0000738,3.15e-11,136;CL:0000623,1.81e-07,3;CL:0000825,1.81e-07,3;CL:0000767,3.04e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;8.65e-22;42!CL:0000049;4.68e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.82e-21!102;UBERON:0003061!1.82e-21!102;UBERON:0002193!1.68e-20!112;UBERON:0007023!6.16e-18!115;UBERON:0002405!1.15e-11!115;UBERON:0000178!3.20e-11!15;UBERON:0000179!3.20e-11!15;UBERON:0000463!3.20e-11!15;UBERON:0002371!7.24e-11!80;UBERON:0001474!1.59e-09!86;UBERON:0003081!1.80e-07!216;UBERON:0004765!6.05e-07!101;UBERON:0001434!6.05e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;2.09e-15;3!UBERON:0002081;8.02e-11;2!UBERON:0002133;2.09e-10;2!UBERON:0000178;8.96e-08;15!UBERON:0000179;8.96e-08;15!UBERON:0000463;8.96e-08;15!UBERON:0003978;3.23e-07;3!UBERON:0000946;3.23e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.95e-17,98;UBERON:0003061,2.95e-17,98;UBERON:0002193,5.53e-17,108;UBERON:0004151,1.72e-15,3;UBERON:0002371,4.12e-13,76;UBERON:0001474,6.57e-12,82;UBERON:0002405,1.33e-11,93;UBERON:0002081,6.75e-11,2;UBERON:0010227,6.75e-11,2;UBERON:0003081,1.43e-10,203;UBERON:0004765,1.48e-10,90;UBERON:0002133,2.42e-10,2;UBERON:0001434,3.60e-09,100;UBERON:0000178,9.66e-08,15;UBERON:0000179,9.66e-08,15;UBERON:0000463,9.66e-08,15;UBERON:0003978,3.56e-07,3;UBERON:0009751,3.56e-07,3;UBERON:0000946,3.56e-07,3;UBERON:0002523,3.56e-07,3;UBERON:0005983,3.56e-07,3;UBERON:0002165,3.56e-07,3;UBERON:0002062,3.56e-07,3;UBERON:0007280,3.56e-07,3 | |||
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| ||
|short_description=p2@COLQ | |short_description=p2@COLQ | ||
}} | }} |
Latest revision as of 05:42, 16 September 2015
Short description: | p2@COLQ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_COLQ_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 61bp_to_ENST00000383786_5end |
EntrezGene: | COLQ |
HGNC: | 2226 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.95e-17 | 98 |
blood island | 2.95e-17 | 98 |
hemolymphoid system | 5.53e-17 | 108 |
cardiac chamber | 1.72e-15 | 3 |
bone marrow | 4.12e-13 | 76 |
bone element | 6.57e-12 | 82 |
immune system | 1.33e-11 | 93 |
cardiac atrium | 6.75e-11 | 2 |
future cardiac atrium | 6.75e-11 | 2 |
lateral plate mesoderm | 1.43e-10 | 203 |
skeletal element | 1.48e-10 | 90 |
atrioventricular valve | 2.42e-10 | 2 |
skeletal system | 3.60e-09 | 100 |
blood | 9.66e-08 | 15 |
haemolymphatic fluid | 9.66e-08 | 15 |
organism substance | 9.66e-08 | 15 |
valve | 3.56e-07 | 3 |
cardiac mesenchyme | 3.56e-07 | 3 |
cardial valve | 3.56e-07 | 3 |
tunica intima | 3.56e-07 | 3 |
heart layer | 3.56e-07 | 3 |
endocardium | 3.56e-07 | 3 |
endocardial cushion | 3.56e-07 | 3 |
presumptive endocardium | 3.56e-07 | 3 |