FFCP PHASE1:Hg19::chr1:22962948..22962961,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=712 | |EntrezGene=712 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1241 | |HGNC=1241 | ||
|TSSclassifier=strong | |||
|UniProt=P02745 | |UniProt=P02745 | ||
|association_with_transcript=-37bp_to_ENST00000374642_5end | |association_with_transcript=-37bp_to_ENST00000374642_5end | ||
|cluster_id=chr1:22962948..22962961,+ | |||
|coexpression_cluster_id=C67 | |coexpression_cluster_id=C67 | ||
|description=CAGE_peak_4_at_C1QA_5end | |description=CAGE_peak_4_at_C1QA_5end | ||
|id=chr1:22962948..22962961,+ | |id=chr1:22962948..22962961,+ | ||
|ontology_enrichment_celltype=CL:0000235;1.80e-23;6!CL:0002619;3.86e-13;3 | |ontology_enrichment_celltype=CL:0002194!3.66e-09!63;CL:0000576!3.66e-09!63;CL:0000040!3.66e-09!63;CL:0000559!3.66e-09!63;CL:0002009!1.11e-08!65;CL:0000839!1.31e-07!70;CL:0000557!2.04e-07!71;CL:0000766!3.00e-07!76;CL:0002619!8.26e-07!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0000235;1.80e-23;6!CL:0002619;3.86e-13;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.52e-23,6;CL:0002619,3.87e-13,3;CL:0002194,1.86e-09,59;CL:0000576,1.86e-09,59;CL:0000040,1.86e-09,59;CL:0000559,1.86e-09,59;CL:0002009,4.75e-09,61;CL:0000839,3.83e-08,66;CL:0000557,5.60e-08,67;CL:0000766,3.18e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0004872;6.25e-09;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0003127;6.74e-08;2!UBERON:0002780;2.04e-07;41!UBERON:0001890;2.04e-07;41!UBERON:0000125;6.33e-07;9!UBERON:0002308;6.33e-07;9!UBERON:0002420;7.34e-07;9!UBERON:0007245;7.34e-07;9!UBERON:0010009;7.34e-07;9!UBERON:0010011;7.34e-07;9!UBERON:0000454;7.34e-07;9 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.21e-73!115;UBERON:0001049!9.57e-26!57;UBERON:0005068!9.57e-26!57;UBERON:0006241!9.57e-26!57;UBERON:0007135!9.57e-26!57;UBERON:0002616!2.55e-21!59;UBERON:0001017!6.15e-19!82;UBERON:0003080!1.07e-18!42;UBERON:0005743!1.24e-18!86;UBERON:0000955!1.27e-17!69;UBERON:0006238!1.27e-17!69;UBERON:0002780!1.58e-17!41;UBERON:0001890!1.58e-17!41;UBERON:0006240!1.58e-17!41;UBERON:0003075!7.95e-17!86;UBERON:0007284!7.95e-17!86;UBERON:0000073!8.80e-16!94;UBERON:0001016!8.80e-16!94;UBERON:0002346!1.39e-15!90;UBERON:0000062!1.91e-14!511;UBERON:0002020!6.55e-14!34;UBERON:0003528!6.55e-14!34;UBERON:0001893!1.27e-13!34;UBERON:0002791!7.14e-13!33;UBERON:0002298!4.30e-12!8;UBERON:0001869!1.35e-11!32;UBERON:0003056!1.39e-11!61;UBERON:0000153!3.85e-11!129;UBERON:0007811!3.85e-11!129;UBERON:0002308!2.25e-10!9;UBERON:0000125!2.25e-10!9;UBERON:0000467!9.92e-10!625;UBERON:0000480!1.15e-09!626;UBERON:0000033!1.92e-09!123;UBERON:0000468!2.81e-09!659;UBERON:0003076!3.09e-08!15;UBERON:0003057!3.09e-08!15;UBERON:0002619!3.23e-08!22;UBERON:0002405!3.50e-08!115;UBERON:0002420!3.69e-08!9;UBERON:0007245!3.69e-08!9;UBERON:0010009!3.69e-08!9;UBERON:0010011!3.69e-08!9;UBERON:0000454!3.69e-08!9;UBERON:0009663!7.16e-08!7;UBERON:0000922!1.61e-07!612;UBERON:0002050!1.86e-07!605;UBERON:0005423!1.86e-07!605;UBERON:0002390!3.39e-07!102;UBERON:0003061!3.39e-07!102;UBERON:0002193!4.12e-07!112;UBERON:0000923!4.79e-07!604;UBERON:0005291!4.79e-07!604;UBERON:0006598!4.79e-07!604;UBERON:0002532!4.79e-07!604;UBERON:0000956!6.44e-07!25;UBERON:0000203!6.44e-07!25;UBERON:0004733!8.11e-07!12;UBERON:0002028!8.11e-07!12;UBERON:0007277!8.11e-07!12;UBERON:0000025!8.71e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;6.74e-08;2!UBERON:0002780;2.04e-07;41!UBERON:0001890;2.04e-07;41!UBERON:0000125;6.33e-07;9!UBERON:0002308;6.33e-07;9!UBERON:0002420;7.34e-07;9!UBERON:0007245;7.34e-07;9!UBERON:0010009;7.34e-07;9!UBERON:0010011;7.34e-07;9!UBERON:0000454;7.34e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.24e-25,114;UBERON:0001049,2.08e-09,56;UBERON:0005068,2.08e-09,56;UBERON:0006241,2.08e-09,56;UBERON:0007135,2.08e-09,56;UBERON:0000073,1.39e-08,53;UBERON:0002616,1.39e-08,53;UBERON:0003528,1.82e-08,34;UBERON:0002020,1.82e-08,34;UBERON:0002780,3.27e-08,41;UBERON:0001890,3.27e-08,41;UBERON:0003080,3.27e-08,41;UBERON:0006240,3.27e-08,41;UBERON:0002405,6.58e-08,93;UBERON:0003127,8.67e-08,2;UBERON:0002791,2.71e-07,32;UBERON:0002390,2.82e-07,98;UBERON:0003061,2.82e-07,98;UBERON:0002193,3.21e-07,108;UBERON:0000125,6.28e-07,9;UBERON:0002308,6.28e-07,9;UBERON:0002420,6.59e-07,9;UBERON:0007245,6.59e-07,9;UBERON:0010009,6.59e-07,9;UBERON:0010011,6.59e-07,9;UBERON:0000454,6.59e-07,9;UBERON:0001893,8.64e-07,34 | |||
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| ||
|short_description=p4@C1QA | |short_description=p4@C1QA | ||
}} | }} |
Latest revision as of 05:50, 16 September 2015
Short description: | p4@C1QA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C1QA_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | -37bp_to_ENST00000374642_5end |
EntrezGene: | C1QA |
HGNC: | 1241 |
UniProt: | P02745 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.52e-23 | 6 |
adult endothelial progenitor cell | 3.87e-13 | 3 |
monopoietic cell | 1.86e-09 | 59 |
monocyte | 1.86e-09 | 59 |
monoblast | 1.86e-09 | 59 |
promonocyte | 1.86e-09 | 59 |
macrophage dendritic cell progenitor | 4.75e-09 | 61 |
myeloid lineage restricted progenitor cell | 3.83e-08 | 66 |
granulocyte monocyte progenitor cell | 5.60e-08 | 67 |
myeloid leukocyte | 3.18e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.24e-25 | 114 |
neural tube | 2.08e-09 | 56 |
neural rod | 2.08e-09 | 56 |
future spinal cord | 2.08e-09 | 56 |
neural keel | 2.08e-09 | 56 |
regional part of nervous system | 1.39e-08 | 53 |
regional part of brain | 1.39e-08 | 53 |
brain grey matter | 1.82e-08 | 34 |
gray matter | 1.82e-08 | 34 |
regional part of forebrain | 3.27e-08 | 41 |
forebrain | 3.27e-08 | 41 |
anterior neural tube | 3.27e-08 | 41 |
future forebrain | 3.27e-08 | 41 |
immune system | 6.58e-08 | 93 |
open tracheal system trachea | 8.67e-08 | 2 |
regional part of telencephalon | 2.71e-07 | 32 |
hematopoietic system | 2.82e-07 | 98 |
blood island | 2.82e-07 | 98 |
hemolymphoid system | 3.21e-07 | 108 |
neural nucleus | 6.28e-07 | 9 |
nucleus of brain | 6.28e-07 | 9 |
basal ganglion | 6.59e-07 | 9 |
nuclear complex of neuraxis | 6.59e-07 | 9 |
aggregate regional part of brain | 6.59e-07 | 9 |
collection of basal ganglia | 6.59e-07 | 9 |
cerebral subcortex | 6.59e-07 | 9 |
telencephalon | 8.64e-07 | 34 |