FFCP PHASE1:Hg19::chr16:30076052..30076069,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:30076052..30076069,+ to FFCP PHASE1:Hg19::chr16:30076052..30076069,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=226 | |EntrezGene=226 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=414 | |HGNC=414 | ||
|TSSclassifier=strong | |||
|UniProt=P04075 | |UniProt=P04075 | ||
|association_with_transcript=79bp_to_ENST00000412304,uc002dwa.3_5end | |||
|cluster_id=chr16:30076052..30076069,+ | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_5_at_ALDOA_5end | |||
|id=chr16:30076052..30076069,+ | |||
|ontology_enrichment_celltype=CL:0000192!3.34e-11!42;CL:0000514!3.34e-11!42;CL:0000183!1.76e-09!59;CL:0000359!2.73e-09!32;CL:0000680!6.03e-09!57;CL:0000056!6.03e-09!57;CL:0000355!6.03e-09!57;CL:0000187!1.46e-08!54;CL:0000393!1.46e-07!60;CL:0000211!1.46e-07!60;CL:0000055!4.36e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000192;1.23e-08;43!CL:0000359;4.23e-08;32!CL:0000136;6.87e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.18e-10,43;CL:0000514,1.18e-10,43;CL:0000359,2.24e-08,32;CL:0000680,5.37e-08,58;CL:0000056,5.37e-08,58;CL:0000355,5.37e-08,58;CL:0000187,7.62e-08,55;CL:0000393,1.32e-07,61;CL:0000211,1.32e-07,61;CL:0000136,4.36e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;1.23e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.90e-16!365;UBERON:0000481!3.49e-16!347;UBERON:0003104!4.16e-12!238;UBERON:0009142!4.16e-12!238;UBERON:0001134!5.88e-11!61;UBERON:0002036!5.88e-11!61;UBERON:0003082!5.88e-11!61;UBERON:0000477!8.26e-11!286;UBERON:0002100!1.06e-10!216;UBERON:0002385!1.28e-10!63;UBERON:0001015!1.28e-10!63;UBERON:0000383!1.28e-10!63;UBERON:0004290!1.46e-10!70;UBERON:0000119!1.56e-10!312;UBERON:0000483!3.98e-10!309;UBERON:0005256!1.19e-09!143;UBERON:0000914!3.19e-09!83;UBERON:0002329!3.19e-09!83;UBERON:0003077!3.19e-09!83;UBERON:0003059!3.19e-09!83;UBERON:0007282!3.19e-09!83;UBERON:0009618!3.19e-09!83;UBERON:0007285!3.19e-09!83;UBERON:0000468!1.09e-08!659;UBERON:0004111!1.90e-08!241;UBERON:0000486!3.79e-08!82;UBERON:0000025!6.97e-08!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.45e-08;9!UBERON:0001557;3.45e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.56e-10,160;UBERON:0009142,1.56e-10,160;UBERON:0001134,2.64e-10,62;UBERON:0002036,2.64e-10,62;UBERON:0003082,2.64e-10,62;UBERON:0002385,4.34e-10,64;UBERON:0001015,4.34e-10,64;UBERON:0000383,4.34e-10,64;UBERON:0007503,1.65e-09,78;UBERON:0007524,2.92e-09,73;UBERON:0003077,4.77e-09,72;UBERON:0007285,4.77e-09,72;UBERON:0002329,7.39e-09,71;UBERON:0003059,7.39e-09,71;UBERON:0007282,7.39e-09,71;UBERON:0004290,7.39e-09,71;UBERON:0009618,7.39e-09,71;UBERON:0005256,1.69e-08,122;UBERON:0001737,3.26e-08,9;UBERON:0002100,3.55e-08,199;UBERON:0003103,2.70e-07,68;UBERON:0001557,6.67e-07,19 | |||
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| ||
|short_description=p5@ALDOA | |||
}} | }} |
Latest revision as of 06:05, 16 September 2015
Short description: | p5@ALDOA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ALDOA_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 79bp_to_ENST00000412304, uc002dwa.3_5end |
EntrezGene: | ALDOA |
HGNC: | 414 |
UniProt: | P04075 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.18e-10 | 43 |
smooth muscle myoblast | 1.18e-10 | 43 |
vascular associated smooth muscle cell | 2.24e-08 | 32 |
muscle precursor cell | 5.37e-08 | 58 |
myoblast | 5.37e-08 | 58 |
multi-potent skeletal muscle stem cell | 5.37e-08 | 58 |
muscle cell | 7.62e-08 | 55 |
electrically responsive cell | 1.32e-07 | 61 |
electrically active cell | 1.32e-07 | 61 |
fat cell | 4.36e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 1.56e-10 | 160 |
entire embryonic mesenchyme | 1.56e-10 | 160 |
skeletal muscle tissue | 2.64e-10 | 62 |
striated muscle tissue | 2.64e-10 | 62 |
myotome | 2.64e-10 | 62 |
muscle tissue | 4.34e-10 | 64 |
musculature | 4.34e-10 | 64 |
musculature of body | 4.34e-10 | 64 |
epithelial vesicle | 1.65e-09 | 78 |
dense mesenchyme tissue | 2.92e-09 | 73 |
paraxial mesoderm | 4.77e-09 | 72 |
presumptive paraxial mesoderm | 4.77e-09 | 72 |
somite | 7.39e-09 | 71 |
presomitic mesoderm | 7.39e-09 | 71 |
presumptive segmental plate | 7.39e-09 | 71 |
dermomyotome | 7.39e-09 | 71 |
trunk paraxial mesoderm | 7.39e-09 | 71 |
trunk mesenchyme | 1.69e-08 | 122 |
larynx | 3.26e-08 | 9 |
trunk | 3.55e-08 | 199 |
compound organ | 2.70e-07 | 68 |
upper respiratory tract | 6.67e-07 | 19 |