FFCP PHASE1:Hg19::chr1:22970588..22970599,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr1:22970588..22970599,+ to FFCP PHASE1:Hg19::chr1:22970588..22970599,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=714 | |EntrezGene=714 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1245 | |HGNC=1245 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=71bp_to_AB528084,AM392881,AM393232,AM393519,CU679233_5end | |||
|cluster_id=chr1:22970588..22970599,+ | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_4_at_C1QC_5end | |||
|id=chr1:22970588..22970599,+ | |||
|ontology_enrichment_celltype=CL:0002619!4.60e-09!3;CL:0000235!7.44e-09!10;CL:0000840!4.45e-07!5;CL:0001029!4.45e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000235;2.01e-41;6!CL:0002619;1.17e-31;3!CL:0000840;1.20e-15;5!CL:0000990;1.28e-10;8!CL:0000451;8.77e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.86e-41,6;CL:0002619,1.17e-31,3;CL:0002194,9.67e-19,59;CL:0000576,9.67e-19,59;CL:0000040,9.67e-19,59;CL:0000559,9.67e-19,59;CL:0002009,4.38e-18,61;CL:0000839,1.29e-16,66;CL:0000557,2.40e-16,67;CL:0000840,9.62e-16,5;CL:0001029,9.62e-16,5;CL:0000766,4.08e-15,72;CL:0000990,1.10e-10,8;CL:0000763,1.41e-09,108;CL:0000049,1.41e-09,108;CL:0002087,6.74e-09,115;CL:0000451,7.78e-09,10;CL:0002031,1.84e-08,120;CL:0000738,2.82e-07,136 | |||
|ontology_enrichment_development_v019=UBERON:0004872;2.71e-13;7!UBERON:0010115;3.81e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.55e-52!115;UBERON:0001049!3.87e-17!57;UBERON:0005068!3.87e-17!57;UBERON:0006241!3.87e-17!57;UBERON:0007135!3.87e-17!57;UBERON:0002616!2.56e-13!59;UBERON:0003075!1.49e-12!86;UBERON:0007284!1.49e-12!86;UBERON:0002780!1.88e-12!41;UBERON:0001890!1.88e-12!41;UBERON:0006240!1.88e-12!41;UBERON:0005743!3.02e-12!86;UBERON:0001893!3.56e-12!34;UBERON:0003080!4.65e-12!42;UBERON:0001017!4.88e-12!82;UBERON:0002346!1.09e-11!90;UBERON:0000955!1.85e-11!69;UBERON:0006238!1.85e-11!69;UBERON:0002791!4.86e-11!33;UBERON:0000062!6.04e-11!511;UBERON:0002020!1.22e-10!34;UBERON:0003528!1.22e-10!34;UBERON:0000073!1.84e-10!94;UBERON:0001016!1.84e-10!94;UBERON:0001869!9.04e-10!32;UBERON:0003056!4.93e-08!61;UBERON:0002619!1.39e-07!22;UBERON:0000467!1.40e-07!625;UBERON:0000480!1.55e-07!626;UBERON:0002298!6.63e-07!8;UBERON:0001950!6.63e-07!20;UBERON:0000468!9.81e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;3.38e-14;3!UBERON:0000029;1.24e-11;1!UBERON:0002363;3.81e-11;1!UBERON:0004177;6.97e-09;5!UBERON:0005057;6.97e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,7.07e-19,93;UBERON:0002193,5.54e-16,108;UBERON:0002390,3.39e-15,98;UBERON:0003061,3.39e-15,98;UBERON:0002371,3.03e-14,76;UBERON:0002106,3.17e-14,3;UBERON:0004854,3.17e-14,3;UBERON:0009034,3.17e-14,3;UBERON:0002095,3.17e-14,3;UBERON:0004782,3.17e-14,3;UBERON:0003281,3.17e-14,3;UBERON:0009664,3.17e-14,3;UBERON:0002296,3.17e-14,3;UBERON:0005602,3.17e-14,3;UBERON:0001179,3.17e-14,3;UBERON:0006293,3.17e-14,3;UBERON:0001474,4.26e-13,82;UBERON:0004765,8.44e-12,90;UBERON:0000029,1.18e-11,1;UBERON:0002363,2.96e-11,1;UBERON:0007645,2.96e-11,1;UBERON:0007647,2.96e-11,1;UBERON:0010115,2.96e-11,1;UBERON:0001434,1.82e-10,100;UBERON:0003081,1.82e-07,203 | |||
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| ||
|short_description=p4@C1QC | |||
}} | }} |
Latest revision as of 06:11, 16 September 2015
Short description: | p4@C1QC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C1QC_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 71bp_to_AB528084, AM392881, AM393232, AM393519, CU679233_5end |
EntrezGene: | C1QC |
HGNC: | 1245 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.86e-41 | 6 |
adult endothelial progenitor cell | 1.17e-31 | 3 |
monopoietic cell | 9.67e-19 | 59 |
monocyte | 9.67e-19 | 59 |
monoblast | 9.67e-19 | 59 |
promonocyte | 9.67e-19 | 59 |
macrophage dendritic cell progenitor | 4.38e-18 | 61 |
myeloid lineage restricted progenitor cell | 1.29e-16 | 66 |
granulocyte monocyte progenitor cell | 2.40e-16 | 67 |
immature conventional dendritic cell | 9.62e-16 | 5 |
common dendritic progenitor | 9.62e-16 | 5 |
myeloid leukocyte | 4.08e-15 | 72 |
conventional dendritic cell | 1.10e-10 | 8 |
myeloid cell | 1.41e-09 | 108 |
common myeloid progenitor | 1.41e-09 | 108 |
nongranular leukocyte | 6.74e-09 | 115 |
dendritic cell | 7.78e-09 | 10 |
hematopoietic lineage restricted progenitor cell | 1.84e-08 | 120 |
leukocyte | 2.82e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
immune system | 7.07e-19 | 93 |
hemolymphoid system | 5.54e-16 | 108 |
hematopoietic system | 3.39e-15 | 98 |
blood island | 3.39e-15 | 98 |
bone marrow | 3.03e-14 | 76 |
spleen | 3.17e-14 | 3 |
gastrointestinal system mesentery | 3.17e-14 | 3 |
stomach region | 3.17e-14 | 3 |
mesentery | 3.17e-14 | 3 |
gastrointestinal system serosa | 3.17e-14 | 3 |
mesentery of stomach | 3.17e-14 | 3 |
gut mesentery | 3.17e-14 | 3 |
dorsal mesentery | 3.17e-14 | 3 |
dorsal mesogastrium | 3.17e-14 | 3 |
peritoneal cavity | 3.17e-14 | 3 |
spleen primordium | 3.17e-14 | 3 |
bone element | 4.26e-13 | 82 |
skeletal element | 8.44e-12 | 90 |
lymph node | 1.18e-11 | 1 |
dura mater | 2.96e-11 | 1 |
future meninx | 2.96e-11 | 1 |
ectomeninx | 2.96e-11 | 1 |
future dura mater | 2.96e-11 | 1 |
skeletal system | 1.82e-10 | 100 |
lateral plate mesoderm | 1.82e-07 | 203 |