FFCP PHASE1:Hg19::chr3:156395692..156395737,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25976 | |EntrezGene=25976 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=23696 | |HGNC=23696 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=205bp_to_AB463307,AM393433_5end | |association_with_transcript=205bp_to_AB463307,AM393433_5end | ||
|cluster_id=chr3:156395692..156395737,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_3_at_TIPARP_5end | |description=CAGE_peak_3_at_TIPARP_5end | ||
|id=chr3:156395692..156395737,+ | |id=chr3:156395692..156395737,+ | ||
|ontology_enrichment_celltype=CL:0000860!4.05e-21!45;CL:0002057!6.36e-21!42;CL:0000557!1.03e-16!71;CL:0002009!5.80e-16!65;CL:0000766!1.35e-15!76;CL:0002194!6.40e-15!63;CL:0000576!6.40e-15!63;CL:0000040!6.40e-15!63;CL:0000559!6.40e-15!63;CL:0000839!7.04e-14!70;CL:0000738!1.60e-13!140;CL:0002031!4.72e-11!124;CL:0002087!4.80e-11!119;CL:0000763!3.12e-10!112;CL:0000049!3.12e-10!112;CL:0000037!9.17e-09!172;CL:0000566!9.17e-09!172;CL:0002032!9.67e-09!165;CL:0000837!9.67e-09!165;CL:0000988!4.99e-07!182 | |ontology_enrichment_celltype=CL:0000860!4.05e-21!45;CL:0002057!6.36e-21!42;CL:0000557!1.03e-16!71;CL:0002009!5.80e-16!65;CL:0000766!1.35e-15!76;CL:0002194!6.40e-15!63;CL:0000576!6.40e-15!63;CL:0000040!6.40e-15!63;CL:0000559!6.40e-15!63;CL:0000839!7.04e-14!70;CL:0000738!1.60e-13!140;CL:0002031!4.72e-11!124;CL:0002087!4.80e-11!119;CL:0000763!3.12e-10!112;CL:0000049!3.12e-10!112;CL:0000037!9.17e-09!172;CL:0000566!9.17e-09!172;CL:0002032!9.67e-09!165;CL:0000837!9.67e-09!165;CL:0000988!4.99e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.05e-33;33!CL:0002057;2.05e-33;33!CL:0000473;6.16e-28;39!CL:0000234;6.16e-28;39!CL:0000576;9.56e-17;48!CL:0000766;3.75e-12;69!CL:0000763;7.30e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,7.54e-33,48;CL:0000234,7.54e-33,48;CL:0000860,1.34e-31,42;CL:0002057,1.34e-31,42;CL:0000557,1.05e-25,67;CL:0002009,2.69e-25,61;CL:0002194,2.29e-23,59;CL:0000576,2.29e-23,59;CL:0000040,2.29e-23,59;CL:0000559,2.29e-23,59;CL:0000766,1.16e-22,72;CL:0000839,7.98e-22,66;CL:0000738,7.24e-18,136;CL:0000763,7.70e-17,108;CL:0000049,7.70e-17,108;CL:0002031,4.05e-16,120;CL:0002087,8.84e-16,115;CL:0000037,2.37e-13,168;CL:0002032,2.60e-13,161;CL:0000837,2.60e-13,161;CL:0000988,9.71e-12,177;CL:0000134,4.71e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;2.21e-23;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.50e-14!80;UBERON:0001474!2.54e-12!86;UBERON:0004765!2.60e-11!101;UBERON:0001434!2.60e-11!101;UBERON:0002390!8.44e-11!102;UBERON:0003061!8.44e-11!102;UBERON:0002193!2.61e-08!112;UBERON:0002405!9.52e-07!115 | |ontology_enrichment_uberon=UBERON:0002371!4.50e-14!80;UBERON:0001474!2.54e-12!86;UBERON:0004765!2.60e-11!101;UBERON:0001434!2.60e-11!101;UBERON:0002390!8.44e-11!102;UBERON:0003061!8.44e-11!102;UBERON:0002193!2.61e-08!112;UBERON:0002405!9.52e-07!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.57e-22,76;UBERON:0001474,1.47e-20,82;UBERON:0004765,3.54e-19,90;UBERON:0001434,1.23e-16,100;UBERON:0002390,1.26e-16,98;UBERON:0003061,1.26e-16,98;UBERON:0002405,2.60e-16,93;UBERON:0002193,1.06e-13,108;UBERON:0002204,2.60e-10,167;UBERON:0003081,3.14e-08,203 | |||
|phase1_expression=0.54503513781167,3.21150785836475,0.422863212287913,0,0.446961094427288,1.74467704820074,0,0,1.04474251279935,0.245733936501509,0,0,0.263766978228454,0.247532705920093,0.994192127183747,2.01697543935533,2.41077811209591,2.92124036154949,1.95173119516203,0,0,0,0.286235987131057,0.684372125364421,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0.786728553697808,3.83829398097213,0.464448369948228,0,0,2.21852406100073,0.154934401160603,0,0,1.10799081706375,4.01088894940283,1.95309783644267,0.447830948479849,0.32389366601898,0,9.74168199823083,6.04601509902095,6.54976965207104,6.27558399645349,10.6903650885675,5.26500830521676,17.261543539329,20.7490172288572,15.371344942758,7.92915065694223,7.10033151942209,5.41705946377367,12.6122367493545,7.64137220161968,4.94391665779186,11.0190201253525,3.53021929783703,12.7867425159808,18.1418215102694,19.1485111316767,22.1636870277001,12.7692064996577,3.40431134814684,7.4738669879469,23.8686231993906,26.5956288394303,10.8594422352558,9.6863920421339,5.15588690382591,8.86094684834476,0.422510572623884,0.425208599930087,0.419317291016752,0.561643155732475,1.20141514273205,0.803627933485401,0.285012743741249,0.39783335439818,0.365328307529268,0,0,0,0,0.400395987036012,0,0,0,0.569212969109448,1.17447437874188,1.91136614062614,1.32171328579026,0.560508562981536,0,0.983548850569165,6.6811829667358,4.72883447698871,4.17966238476695,0,0,0,1.33692548262208,0.589211814949674,0.221533894583621,0.812411591295047,1.92136979588513,1.69077151827842,2.30213066445147,1.38175008892924,2.31842468588042,0.14828656316206,0.802622484269139,0,1.0197840842781,2.29932296161153,2.06176467289578,1.01207876807801,0.637130828648193,0,0,0.752875595388864,0.383959833463255,0,0,0,1.41124720257313,7.2208852861547,2.17236605824198,0,2.01210257911091,0,0,0,0.579386075843295,0.795285947051099,0.973269740605272,0.0945348171640679,0.665188192387692,0.263504357079378,0.196468613246569,0,0.741568885568859,0,0.174129737299267,0.930705723632056,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0.550236083880135,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,1.53316637465883,0,0.366403487860815,1.31780417436063,0,0,0.496971951695318,0.633152558322899,1.05927344650575,0.286836620748814,0.709336764396714,1.12135520028461,0,0,0,0.269421344139376,0.653847612453835,0,0,0,0,0,0.597794722207204,1.17434498643765,0.485618833104395,0.140450806702248,0,1.71968044236475,0,0,0.247266929278557,0,0,0.336672227908132,0.625592599359821,0.277064115484183,0,1.83892677479412,0,0.453728732640084,0.89694817844431,0.640672166455702,0.423863802319124,0.600182192168805,0.824420233907511,0.772921620136887,0.37223371266318,0.168776332241266,0.389748020644795,1.26216887122057,0.368199594569197,0,0.355009592516614,0.906768884048762,0.339121184620975,0.57978255948989,0.545492241181669,0.286804595389004,0.121973706129595,0.132529768321485,0.348581828608555,0.10366105501537,0,0,0,2.57296375277154,0,1.39310378409594,0,0.473227200159376,0.505754070234305,0.482022059766964,0.882351781859152,0.435758888184812,0.949082476444386,0.674156540800822,0.784885860501384,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0.171567810298526,0.439001141634502,0,1.91005047582099,1.48141512253647,0,0,1.44331342025273,0.115930404975077,0.117408694235822,0.144366447761074,0.462985512576611,0.190254152234598,0.790204397959275,0,1.23108503043699,0,0.297262324577456,0,1.00789276919316,1.55952606966625,0.268675568108545,0.581267877027924,1.91691339582606,0.492663237895943,0,0.829312462163088,1.44119953416961,1.51490920111656,0.126995788584338,0.381988425558278,1.17217447210047,0,0.616964956219941,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0.428933980974443,1.08524321078289,0,0,0.355391948742546,0,0,0,0.499864955910285,3.64871341923571,1.00451418286425,4.21667878966063,0,0,1.42636905040718,0.723906533337896,2.67119219315498,0.179060963239896,0.224170287987055,0.985153801009636,3.88129634747131,1.54011643535698,0.508189248444927,0,0,0.167516265334349,0,0.749007023947182,5.9832291840805,0,0.49076596687656,0,0.271265023699736,0.415941723061614,4.10386674233472,1.57702415033935,0,0,0,0,0.664225598535437,1.29058417979192,0.173767228936166,0,0,0.206768026122887,3.23571301227925,1.81436848265855,0,0,0,0.248107807818777,0.767309866440312,0.561320188866147,0.768834895534206,0.511707249066704,0.321707842287215,0,1.07946785661859,0.887808626565635,0.492762936082855,2.59627214591811,1.74315567689939,0.241718899183244,4.21063587636898,1.38121483403844,0,0.910455840033585,0.917870904715969,0,0.462092022626489,0,0,0.422206515571503,0,0.170093705276516,0.863663664408557,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.206082023295445,0.457847324091717,0,0,0.650060246036521,0,0.193341436584244,0.462145851343933,0,0.275673144969061,0.537101224341368,0.870100163485371,0.340906509664404,0.0890320356467374,0.991709492165869,0.384380134730212,1.14851441245126,0.910420027699949,0.929691098594572,0.3148123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| ||
|short_description=p3@TIPARP | |short_description=p3@TIPARP | ||
}} | }} |
Latest revision as of 06:27, 16 September 2015
Short description: | p3@TIPARP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TIPARP_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 205bp_to_AB463307, AM393433_5end |
EntrezGene: | TIPARP |
HGNC: | 23696 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 7.54e-33 | 48 |
phagocyte | 7.54e-33 | 48 |
classical monocyte | 1.34e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.34e-31 | 42 |
granulocyte monocyte progenitor cell | 1.05e-25 | 67 |
macrophage dendritic cell progenitor | 2.69e-25 | 61 |
monopoietic cell | 2.29e-23 | 59 |
monocyte | 2.29e-23 | 59 |
monoblast | 2.29e-23 | 59 |
promonocyte | 2.29e-23 | 59 |
myeloid leukocyte | 1.16e-22 | 72 |
myeloid lineage restricted progenitor cell | 7.98e-22 | 66 |
leukocyte | 7.24e-18 | 136 |
myeloid cell | 7.70e-17 | 108 |
common myeloid progenitor | 7.70e-17 | 108 |
hematopoietic lineage restricted progenitor cell | 4.05e-16 | 120 |
nongranular leukocyte | 8.84e-16 | 115 |
hematopoietic stem cell | 2.37e-13 | 168 |
hematopoietic oligopotent progenitor cell | 2.60e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.60e-13 | 161 |
hematopoietic cell | 9.71e-12 | 177 |
mesenchymal cell | 4.71e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.57e-22 | 76 |
bone element | 1.47e-20 | 82 |
skeletal element | 3.54e-19 | 90 |
skeletal system | 1.23e-16 | 100 |
hematopoietic system | 1.26e-16 | 98 |
blood island | 1.26e-16 | 98 |
immune system | 2.60e-16 | 93 |
hemolymphoid system | 1.06e-13 | 108 |
musculoskeletal system | 2.60e-10 | 167 |
lateral plate mesoderm | 3.14e-08 | 203 |