FFCP PHASE1:Hg19::chr19:16177826..16177832,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7171 | |EntrezGene=7171 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12013 | |HGNC=12013 | ||
|TSSclassifier=strong | |||
|UniProt=P67936 | |UniProt=P67936 | ||
|association_with_transcript=-484bp_to_ENST00000344824,NM_001145160,uc002ndi.2_5end | |association_with_transcript=-484bp_to_ENST00000344824,NM_001145160,uc002ndi.2_5end | ||
|cluster_id=chr19:16177826..16177832,+ | |||
|coexpression_cluster_id=C237 | |coexpression_cluster_id=C237 | ||
|description=CAGE_peak_13_at_TPM4_5end | |description=CAGE_peak_13_at_TPM4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000763,4.95e-08,108;CL:0000049,4.95e-08,108 | |||
|ontology_enrichment_development_v019=CL:0000049;7.71e-07;108 | |ontology_enrichment_development_v019=CL:0000049;7.71e-07;108 | ||
|ontology_enrichment_disease=DOID:162!3.80e-09!235;DOID:4929!5.47e-09!2;DOID:14566!8.23e-09!239;DOID:299!4.79e-07!25 | |ontology_enrichment_disease=DOID:162!3.80e-09!235;DOID:4929!5.47e-09!2;DOID:14566!8.23e-09!239;DOID:299!4.79e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:9119;2.58e-34;1!DOID:8692;6.44e-27;31!DOID:1240;8.80e-18;39!DOID:4929;1.17e-17;2!DOID:2531;1.25e-12;51!DOID:0060083;1.25e-12;51 | |ontology_enrichment_disease_v019=DOID:9119;2.58e-34;1!DOID:8692;6.44e-27;31!DOID:1240;8.80e-18;39!DOID:4929;1.17e-17;2!DOID:2531;1.25e-12;51!DOID:0060083;1.25e-12;51 | ||
|ontology_enrichment_disease_v019_2=DOID:9119,2.58e-34,1;DOID:8692,5.02e-27,31;DOID:1240,1.30e-21,39;DOID:4929,1.27e-17,2;DOID:2531,1.16e-16,51;DOID:0060083,1.16e-16,51;DOID:0050686,5.05e-09,137 | |||
|ontology_enrichment_uberon=UBERON:0002294!2.03e-09!7;UBERON:0001173!2.03e-09!7;UBERON:0004912!2.03e-09!7;UBERON:0002075!2.19e-07!18 | |ontology_enrichment_uberon=UBERON:0002294!2.03e-09!7;UBERON:0001173!2.03e-09!7;UBERON:0004912!2.03e-09!7;UBERON:0002075!2.19e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0004913;8.34e-34;1!UBERON:0003703;8.34e-34;1!UBERON:0001174;8.34e-34;1!UBERON:0004914;8.34e-34;1!UBERON:0002114;3.06e-12;2!UBERON:0002394;1.63e-09;4!UBERON:0003928;1.63e-09;4!UBERON:0002108;7.25e-08;4 | |ontology_enrichment_uberon_v019=UBERON:0004913;8.34e-34;1!UBERON:0003703;8.34e-34;1!UBERON:0001174;8.34e-34;1!UBERON:0004914;8.34e-34;1!UBERON:0002114;3.06e-12;2!UBERON:0002394;1.63e-09;4!UBERON:0003928;1.63e-09;4!UBERON:0002108;7.25e-08;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,9.85e-34,1;UBERON:0003703,9.85e-34,1;UBERON:0001174,9.85e-34,1;UBERON:0004914,9.85e-34,1;UBERON:0002114,3.24e-12,2;UBERON:0002108,7.49e-08,4;UBERON:0002394,9.49e-07,6;UBERON:0003928,9.49e-07,6 | |||
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| ||
|short_description=p13@TPM4 | |short_description=p13@TPM4 | ||
}} | }} |
Latest revision as of 08:58, 16 September 2015
Short description: | p13@TPM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_TPM4_5end |
Coexpression cluster: | C237_acute_breast_testicular_hepatoblastoma_chronic_argyrophil_Bronchial |
Association with transcript: | -484bp_to_ENST00000344824, NM_001145160, uc002ndi.2_5end |
EntrezGene: | TPM4 |
HGNC: | 12013 |
UniProt: | P67936 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 4.95e-08 | 108 |
common myeloid progenitor | 4.95e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 9.85e-34 | 1 |
extrahepatic bile duct | 9.85e-34 | 1 |
common bile duct | 9.85e-34 | 1 |
duodenal papilla | 9.85e-34 | 1 |
duodenum | 3.24e-12 | 2 |
small intestine | 7.49e-08 | 4 |
bile duct | 9.49e-07 | 6 |
digestive system duct | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 2.58e-34 | 1 |
myeloid leukemia | 5.02e-27 | 31 |
leukemia | 1.30e-21 | 39 |
tubular adenocarcinoma | 1.27e-17 | 2 |
hematologic cancer | 1.16e-16 | 51 |
immune system cancer | 1.16e-16 | 51 |
organ system cancer | 5.05e-09 | 137 |