FFCP PHASE1:Hg19::chr19:16178336..16178354,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7171 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12013 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000538887_5end | |||
|cluster_id=chr19:16178336..16178354,+ | |||
|description=CAGE_peak_2_at_TPM4_5end | |||
|id=chr19:16178336..16178354,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.01e-18!180;CL:0000057!1.79e-12!75;CL:0000680!9.25e-10!57;CL:0000056!9.25e-10!57;CL:0000355!9.25e-10!57;CL:0000187!1.27e-08!54;CL:0000220!1.67e-08!246;CL:0002321!4.55e-08!248;CL:0000192!7.72e-08!42;CL:0000514!7.72e-08!42;CL:0000222!9.26e-08!119;CL:0000183!1.19e-07!59;CL:0002620!3.40e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.50e-07;23!CL:0000192;8.89e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.48e-13,76;CL:0000680,1.76e-10,58;CL:0000056,1.76e-10,58;CL:0000355,1.76e-10,58;CL:0000187,2.69e-09,55;CL:0000192,1.63e-08,43;CL:0000514,1.63e-08,43;CL:0000222,3.96e-08,121;CL:0002321,7.78e-08,250;CL:0002620,2.47e-07,23;CL:0000393,2.83e-07,61;CL:0000211,2.83e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;8.89e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.15e-13!365;UBERON:0003102!4.38e-13!95;UBERON:0000914!8.00e-13!83;UBERON:0002329!8.00e-13!83;UBERON:0003077!8.00e-13!83;UBERON:0003059!8.00e-13!83;UBERON:0007282!8.00e-13!83;UBERON:0009618!8.00e-13!83;UBERON:0007285!8.00e-13!83;UBERON:0000468!3.07e-12!659;UBERON:0003104!6.66e-12!238;UBERON:0009142!6.66e-12!238;UBERON:0000486!1.62e-11!82;UBERON:0002100!2.94e-11!216;UBERON:0000467!9.75e-11!625;UBERON:0000480!1.75e-10!626;UBERON:0001981!6.26e-10!60;UBERON:0007500!6.26e-10!60;UBERON:0004537!6.26e-10!60;UBERON:0006965!6.26e-10!60;UBERON:0001637!1.07e-09!42;UBERON:0003509!1.07e-09!42;UBERON:0004572!1.07e-09!42;UBERON:0000481!1.09e-09!347;UBERON:0002385!1.35e-09!63;UBERON:0001015!1.35e-09!63;UBERON:0000383!1.35e-09!63;UBERON:0004290!1.42e-09!70;UBERON:0004872!2.35e-09!84;UBERON:0005256!3.43e-09!143;UBERON:0001134!3.45e-09!61;UBERON:0002036!3.45e-09!61;UBERON:0003082!3.45e-09!61;UBERON:0000055!5.58e-09!69;UBERON:0002049!1.57e-08!79;UBERON:0007798!1.57e-08!79;UBERON:0004119!5.34e-08!169;UBERON:0000925!5.34e-08!169;UBERON:0006595!5.34e-08!169;UBERON:0004573!6.25e-08!33;UBERON:0004571!6.25e-08!33;UBERON:0000490!7.43e-08!138;UBERON:0000926!1.27e-07!448;UBERON:0004120!1.27e-07!448;UBERON:0006603!1.27e-07!448;UBERON:0000477!2.93e-07!286;UBERON:0002050!4.02e-07!605;UBERON:0005423!4.02e-07!605;UBERON:0004535!4.93e-07!110;UBERON:0001009!5.56e-07!113;UBERON:0000923!6.06e-07!604;UBERON:0005291!6.06e-07!604;UBERON:0006598!6.06e-07!604;UBERON:0002532!6.06e-07!604;UBERON:0000165!8.01e-07!28;UBERON:0000930!8.01e-07!28;UBERON:0002199!8.13e-07!45;UBERON:0002416!8.13e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.02e-08;42!UBERON:0003509;6.02e-08;42!UBERON:0004572;6.02e-08;42!UBERON:0004573;2.24e-07;33!UBERON:0004571;2.24e-07;33!UBERON:0000165;7.85e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.99e-15,99;UBERON:0000486,1.94e-12,83;UBERON:0002385,2.71e-10,64;UBERON:0001015,2.71e-10,64;UBERON:0000383,2.71e-10,64;UBERON:0002329,2.96e-10,71;UBERON:0003059,2.96e-10,71;UBERON:0007282,2.96e-10,71;UBERON:0004290,2.96e-10,71;UBERON:0009618,2.96e-10,71;UBERON:0007524,3.28e-10,73;UBERON:0003077,4.20e-10,72;UBERON:0007285,4.20e-10,72;UBERON:0001637,6.80e-10,42;UBERON:0003509,6.80e-10,42;UBERON:0004572,6.80e-10,42;UBERON:0001134,7.15e-10,62;UBERON:0002036,7.15e-10,62;UBERON:0003082,7.15e-10,62;UBERON:0007500,9.47e-10,59;UBERON:0001981,9.47e-10,59;UBERON:0004537,9.47e-10,59;UBERON:0006965,9.47e-10,59;UBERON:0004872,2.34e-09,83;UBERON:0000055,7.36e-09,68;UBERON:0000490,1.49e-08,148;UBERON:0002049,2.71e-08,78;UBERON:0007798,2.71e-08,78;UBERON:0002100,2.71e-08,199;UBERON:0005256,2.86e-08,122;UBERON:0007503,2.98e-08,78;UBERON:0004573,4.36e-08,33;UBERON:0004571,4.36e-08,33;UBERON:0004119,1.37e-07,160;UBERON:0000925,1.37e-07,160;UBERON:0006595,1.37e-07,160;UBERON:0002199,2.94e-07,46;UBERON:0002416,2.94e-07,46;UBERON:0000165,6.33e-07,29;UBERON:0000930,6.33e-07,29;UBERON:0004535,8.42e-07,109;UBERON:0002050,8.59e-07,564;UBERON:0001009,9.42e-07,112 | |||
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| |||
|short_description=p2@TPM4 | |||
}} |
Latest revision as of 08:58, 16 September 2015
Short description: | p2@TPM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TPM4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000538887_5end |
EntrezGene: | TPM4 |
HGNC: | 12013 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.48e-13 | 76 |
muscle precursor cell | 1.76e-10 | 58 |
myoblast | 1.76e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.76e-10 | 58 |
muscle cell | 2.69e-09 | 55 |
smooth muscle cell | 1.63e-08 | 43 |
smooth muscle myoblast | 1.63e-08 | 43 |
mesodermal cell | 3.96e-08 | 121 |
embryonic cell | 7.78e-08 | 250 |
skin fibroblast | 2.47e-07 | 23 |
electrically responsive cell | 2.83e-07 | 61 |
electrically active cell | 2.83e-07 | 61 |