FFCP PHASE1:Hg19::chr7:131196000..131196025,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:131196000..131196025,-
|short_description=p8@PODXL
|description=CAGE_peak_8_at_PODXL_5end
|association_with_transcript=-343bp_to_ENST00000482581_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5420 | |EntrezGene=5420 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9171 | |HGNC=9171 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-343bp_to_ENST00000482581_5end | |||
|cluster_id=chr7:131196000..131196025,- | |||
|coexpression_cluster_id=C957 | |||
|description=CAGE_peak_8_at_PODXL_5end | |||
|id=chr7:131196000..131196025,- | |||
|ontology_enrichment_celltype=CL:0000071!3.80e-09!18;CL:0002546!3.80e-09!18;CL:0002139!8.94e-09!24;CL:0000213!9.05e-07!57;CL:0000215!9.05e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002322;6.95e-13;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.44e-13,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.50e-07;3!DOID:127;1.50e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.40e-07,3;DOID:127,2.40e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.34e-18!115;UBERON:0001017!5.84e-14!82;UBERON:0005743!2.92e-13!86;UBERON:0001049!4.29e-13!57;UBERON:0005068!4.29e-13!57;UBERON:0006241!4.29e-13!57;UBERON:0007135!4.29e-13!57;UBERON:0000955!3.01e-12!69;UBERON:0006238!3.01e-12!69;UBERON:0002780!3.94e-12!41;UBERON:0001890!3.94e-12!41;UBERON:0006240!3.94e-12!41;UBERON:0002616!6.18e-12!59;UBERON:0002020!9.00e-12!34;UBERON:0003528!9.00e-12!34;UBERON:0000073!9.37e-12!94;UBERON:0001016!9.37e-12!94;UBERON:0003080!1.45e-11!42;UBERON:0001893!6.47e-11!34;UBERON:0002791!8.37e-11!33;UBERON:0001869!1.08e-10!32;UBERON:0003075!2.06e-10!86;UBERON:0007284!2.06e-10!86;UBERON:0002346!3.21e-09!90;UBERON:0000477!3.50e-09!286;UBERON:0000956!3.62e-09!25;UBERON:0000203!3.62e-09!25;UBERON:0001986!3.80e-09!18;UBERON:0004638!3.80e-09!18;UBERON:0004852!3.80e-09!18;UBERON:0000025!4.31e-09!194;UBERON:0000468!1.02e-08!659;UBERON:0004111!1.49e-08!241;UBERON:0000480!4.01e-08!626;UBERON:0001950!4.63e-08!20;UBERON:0002619!5.83e-08!22;UBERON:0000467!5.96e-08!625;UBERON:0003056!6.88e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;3.47e-09;11!UBERON:0000956;3.98e-09;25!UBERON:0000203;3.98e-09;25!UBERON:0002619;6.19e-09;22!UBERON:0001950;2.85e-08;20!UBERON:0000922;3.84e-08;49!UBERON:0003978;5.41e-07;3!UBERON:0000946;5.41e-07;3!UBERON:0000473;5.47e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,2.51e-09,11;UBERON:0000956,3.89e-09,25;UBERON:0000203,3.89e-09,25;UBERON:0002619,6.82e-09,22;UBERON:0001950,2.68e-08,20;UBERON:0003528,2.95e-07,34;UBERON:0002020,2.95e-07,34;UBERON:0003978,3.19e-07,3;UBERON:0009751,3.19e-07,3;UBERON:0000946,3.19e-07,3;UBERON:0002523,3.19e-07,3;UBERON:0005983,3.19e-07,3;UBERON:0002165,3.19e-07,3;UBERON:0002062,3.19e-07,3;UBERON:0007280,3.19e-07,3;UBERON:0000473,6.12e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.791300934685361,0,0,0,0,0,0.487932798790507,0,0,0.313454721478088,0.286235987131057,0.410623275218653,1.63205431473244,0,0,0.157421562627358,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0.0945348171640679,0,0.087834785693126,0.72038491523742,0,0,0,0,0.132957960518865,0,0,0,0.39752481473341,0.860234595106124,3.81854551768354,0.56530794192401,2.09749718104953,0.825354125820202,1.46296476575767,0,0,0,0.805658634218294,0.760272105718513,1.70843440283719,0.367663080345869,1.62028389576352,0.446498641420399,0.22452937262617,0.563057402416611,0,0.949265659568129,0.549605231791222,0,0,0,0,0,0,0,0.709336764396714,0,0,0.24666754841716,0,0,0,0,0.576175924479999,0,0.312160076830321,0,0,0.117434498643765,0.485618833104395,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0.30648779579902,0,0,5.91985797773244,0,0,3.30100205692843,0.103052529238439,0.772921620136887,0,1.68776332241266,1.26668106709558,1.51460264546469,0.0920498986422993,0,1.77504796258307,2.82105875037393,0,0.193260853163297,0,0,6.58658013099815,3.44577397635862,6.04208502921496,3.93912009058408,7.31730467539322,2.91981887260664,0,0,0,0,0,0.354920400119532,0.168584690078102,0,0.330881918197182,0,0.71181185733329,0.539325232640658,0.392442930250692,0.38474715694639,1.4763109092493,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,2.7429625074604,0.462985512576611,4.75635380586496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0.128343036279748,0,0,1.54657762555539,0.335032530668698,0,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0.511707249066704,0.321707842287215,0,0.154209693802656,0,0.164254312027618,0,0.697262270759755,0.241718899183244,0,0,0,0,0,0,0.385076685522074,0,0,0.211103257785751,2.27466768141793,2.89159298970077,0.863663664408557,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.183138929636687,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0.192190067365106,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,1.05650146756755,0,0,0,0,0.66343897524122,0,0,0,0,0.6196469961995,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399158742865633,0,0,0,0,0,0.156679895773023,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.73254089635947,0,0,0,0,0,0.307160702099232,1.9882952955326,0.703347082052564,0,0,0,0.19924798825107,0,0,0.613612095012929,0,0.311039587661807,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.371072392647405,0,0.7812832832557,0,0,0.227586896570999,0,0,0.689486746482929,0,0.173624994933292,0.885741385813839,0.723578631752448,0,0.442317039724898,0.886642856860642,0.219385397153973,0,0,0.846452843541768,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.848118428603645,0,0,0.176915129006678,1.22206028986725,0,0,0.104421949505455,0.134802265961354,0.802577647298789,0.234264445725339,0.91227394607833,0,1.45668227720456,1.97292201424695,2.41981432097328,0.61214552326098,0.505492637027904,0.150323419414493,0,2.65861549082874,1.98595173525299,1.88359751044335,0,0,0,0.694238953340524,0.0979923974143777,0,0.34945333648406,0.343972064943233,2.03188295707079,1.97341156132701,2.21711734043665,0.290967049465258,0,1.80784592624426,0.274083849293502,0.596143835108969,0.443175571691151,0.782205530939212,0.320635281006135,0.426905989478705,1.39866726707491,0,0.114536596165916,0.343189995723929,0,0.124252535565433,0.235694034616795,2.31037150325144,2.30126261887133,0,0,0,0.547621515567972,0,0,0,1.67569440763353,1.83328339209347,2.15361907373044,1.19807400299395,3.43380838509257,0.223171457441873,0.604651252380536,0,0,0,0,0,0,0,0,1.0896272488926,2.25054407851027,4.53880140770872,16.2021731831382,0,0,0.303747783290123,0,1.33969702408637,2.62272940674991,0,0,0,1.42939065274673,0.662091970365432,0.5085370753095,1.08599920350743,2.5926644736038,4.24563568142232,0,0,0,0,0.146552233678082,0,1.42211251997706,0.79339561045614,0,0,0.640724475406168,0.78602152549833,0.828478110694391,0.992332043623902,0.197611631897944,0,0,0,0,0,0,0,0,6.22333951000012,1.502291168478,1.14681839138014,0.887432412294818,0.310482014706917,0.553394539744923,0.249960815924213,0,0,3.2937214757744,1.40500471742064,0.434763085832475,0.149254802886874,0,0,0,0,0,0.228840068396924,0,0.15543720058278,0.147855149989634,0,0,0.155262956876259,0.414706207840855,0,0.521745061811734,0,0,0.406870733204662,0,0.107410557042488,0,0.398095888698616,8.00055529326307,0,0,0,0.963099152036517,1.07220795687463,0,2.04035332961045,0,0.244736704506468,1.61179956973339,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| ||
|short_description=p8@PODXL | |||
}} | }} |
Latest revision as of 10:09, 16 September 2015
Short description: | p8@PODXL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PODXL_5end |
Coexpression cluster: | C957_iPS_Fibroblast_teratocarcinoma_mesenchymal_H9_leiomyoma_testicular |
Association with transcript: | -343bp_to_ENST00000482581_5end |
EntrezGene: | PODXL |
HGNC: | 9171 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.44e-13 | 5 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 2.51e-09 | 11 |
cerebral cortex | 3.89e-09 | 25 |
pallium | 3.89e-09 | 25 |
regional part of cerebral cortex | 6.82e-09 | 22 |
neocortex | 2.68e-08 | 20 |
brain grey matter | 2.95e-07 | 34 |
gray matter | 2.95e-07 | 34 |
valve | 3.19e-07 | 3 |
cardiac mesenchyme | 3.19e-07 | 3 |
cardial valve | 3.19e-07 | 3 |
tunica intima | 3.19e-07 | 3 |
heart layer | 3.19e-07 | 3 |
endocardium | 3.19e-07 | 3 |
endocardial cushion | 3.19e-07 | 3 |
presumptive endocardium | 3.19e-07 | 3 |
testis | 6.12e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.40e-07 | 3 |
leiomyoma | 2.40e-07 | 3 |