FFCP PHASE1:Hg19::chr9:138852986..138853002,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10422 | |EntrezGene=10422 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30221 | |HGNC=30221 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=55bp_to_ENST00000478485_5end | |association_with_transcript=55bp_to_ENST00000478485_5end | ||
|cluster_id=chr9:138852986..138853002,- | |||
|coexpression_cluster_id=C122 | |||
|description=CAGE_peak_3_at_UBAC1_5end | |description=CAGE_peak_3_at_UBAC1_5end | ||
|id=chr9:138852986..138853002,- | |id=chr9:138852986..138853002,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000764;2.99e-13;2!CL:0000558;2.99e-13;2!CL:0001014;5.28e-13;2!CL:0001016;5.28e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.09e-13,2;CL:0000765,3.09e-13,2;CL:0000050,3.09e-13,2;CL:0000038,3.09e-13,2;CL:0000558,3.09e-13,2;CL:0000547,3.09e-13,2;CL:0000549,3.09e-13,2;CL:0000550,3.09e-13,2;CL:0000552,3.09e-13,2;CL:0001014,5.29e-13,2;CL:0001016,5.29e-13,2;CL:0000763,1.86e-10,108;CL:0000049,1.86e-10,108;CL:0002032,6.92e-07,161;CL:0000837,6.92e-07,161 | |||
|ontology_enrichment_development_v019=UBERON:0004874;6.68e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1036;1.49e-26;8!DOID:8692;1.30e-13;31!DOID:1240;4.50e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.23e-26,8;DOID:8692,4.82e-14,31;DOID:1240,7.55e-11,39;DOID:2531,6.10e-08,51;DOID:0060083,6.10e-08,51 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001389;1.59e-07;1!UBERON:0000026;1.59e-07;1!UBERON:0008784;1.59e-07;1!UBERON:0006058;1.59e-07;1!UBERON:0003663;1.59e-07;1!UBERON:0004256;1.59e-07;1!UBERON:0004708;1.59e-07;1!UBERON:0002101;1.59e-07;1!UBERON:0004709;1.59e-07;1!UBERON:0002529;1.59e-07;1!UBERON:0010538;1.59e-07;1!UBERON:0003661;1.59e-07;1!UBERON:0010890;1.59e-07;1!UBERON:0002471;1.59e-07;1!UBERON:0001383;1.59e-07;1!UBERON:0010758;1.59e-07;1!UBERON:0010707;1.59e-07;1!UBERON:0000978;1.59e-07;1!UBERON:0002103;1.59e-07;1!UBERON:0001665;1.59e-07;1!UBERON:0003823;1.59e-07;1!UBERON:0000154;1.59e-07;1!UBERON:0010709;1.59e-07;1!UBERON:0000989;6.68e-07;1!UBERON:0007195;6.68e-07;1!UBERON:0008811;6.68e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,1.55e-07,1;UBERON:0001389,1.55e-07,1;UBERON:0000026,1.55e-07,1;UBERON:0008784,1.55e-07,1;UBERON:0006058,1.55e-07,1;UBERON:0003663,1.55e-07,1;UBERON:0004256,1.55e-07,1;UBERON:0004708,1.55e-07,1;UBERON:0002101,1.55e-07,1;UBERON:0004709,1.55e-07,1;UBERON:0002529,1.55e-07,1;UBERON:0010538,1.55e-07,1;UBERON:0003661,1.55e-07,1;UBERON:0010890,1.55e-07,1;UBERON:0002471,1.55e-07,1;UBERON:0001383,1.55e-07,1;UBERON:0004357,1.55e-07,1;UBERON:0004347,1.55e-07,1;UBERON:0005420,1.55e-07,1;UBERON:0005732,1.55e-07,1;UBERON:0010758,1.55e-07,1;UBERON:0010707,1.55e-07,1;UBERON:0000978,1.55e-07,1;UBERON:0002103,1.55e-07,1;UBERON:0001665,1.55e-07,1;UBERON:0003823,1.55e-07,1;UBERON:0000154,1.55e-07,1;UBERON:0010709,1.55e-07,1;UBERON:0005733,1.55e-07,1;UBERON:0005730,1.55e-07,1;UBERON:0000989,4.85e-07,1;UBERON:0008811,4.85e-07,1;UBERON:0006258,4.85e-07,1;UBERON:0005876,4.85e-07,1;UBERON:0004874,4.85e-07,1;UBERON:0007195,9.73e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0.263766978228454,0,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0.152826811495903,0,0.0787107813136792,0.393364276848904,1.53531759238885,0.309632246632152,0,0.30120591877825,0.369754010166788,0.154934401160603,0,0,0,0.601633342410425,0.434021741431704,0.447830948479849,0,0,0.290796477559129,0,0,0,0.822335776043652,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0.962787081228281,0,0,0,0.426224750532694,0,0,0,0,0,0.217188844705117,0,0,0.316462387440884,0.211255286311942,0.637812899895131,0,0,0,0,1.14005097496499,0.79566670879636,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0.393419540227666,0,1.23360899399706,0,0,0,1.94826728407911,0,0.294605907474837,0,0.270803863765016,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0.403213486449465,0.267440195783507,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.0654895377488563,0.364295288292542,0.741568885568859,0.324547393654683,0.348259474598534,0.797747763113191,0.238490624305342,0,0,0,0,0.347140501607594,0,0,0,0,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0.366403487860815,0,0,0.436094052142534,0,0,0.397227542439656,0,0,0,0,0.24666754841716,0,0.134710672069688,0.326923806226917,0,0,0.234321431833797,0,0,0,0,0.161872944368132,0.140450806702248,0.204154171254893,0.245668634623536,0,1.18800285728205,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0.194874010322397,0,0,0.161646056818812,0,0,0.169560592310488,0,0,0,0.121973706129595,0.795178609928912,0,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0.964044119533928,0.441175890929576,0.217879444092406,0.474541238222193,0.404493924480493,0.784885860501384,0.769494313892781,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.219500570817251,0,0.201057944823262,0.0925884451585296,0,0,0,0.231860809950154,0,0.144366447761074,0,0,0,0,0.246217006087397,0.468008530278475,0.297262324577456,0,0,0.141775097242386,0.268675568108545,0.290633938513962,0.383382679165211,0.492663237895943,0,0.414656231081544,0,0,0.317489471460845,0,0,0,0.308482478109971,0,0.285826432630578,0,0,0,0,0,0.845302752556,0.26593811658487,0,0,1.41849132023278,0,0.142977993658148,0,0,0,0,0,0,0.871533458600294,0.199945982364114,0,0.502257091432126,0,0,0,0,0,0.205476322550383,0.179060963239896,0.224170287987055,0,0.431255149719035,0.256686072559497,0,0,0.773288812777695,0.167516265334349,0,0,2.99161459204025,0,0,0,0,0,0.178428988797162,0.315404830067869,0.117141414992713,0,0,1.03473071292505,0,0.184369168541703,0.0868836144680828,0,0,0.413536052245775,0.431428401637234,0.426910231213777,0,0,0.30239029332968,0,0.153461973288062,0.280660094433074,0,0,0,0,0.154209693802656,0,0,0,0,0.362578348774867,0.200506470303285,0,0.114814448164607,0.182091168006717,0,0.451199612907412,0,0,0,0.105551628892876,0,0.680374821106063,0,0,0,0.501689773854853,0.254876273045038,0,0.447749509444357,12.9363327221101,10.457418040996,0.256450125116389,0,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0,0,0.255679882248303,0.0890320356467374,0.165284915360978,0,0.127612712494584,0.10115778085555,0,0,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0,0.316379424718726,0,0,0.42793898803392,0,0,0,0,0,0,1.58510321173008,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0.405820753925408,0,0,0,0,0.35667105148125,0,0,0.329294892959902,0,0,0.0962221127255121,0,1.08890984861323,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.980160863924127,0.185803175125719,0.144269212976445,0.0711418433484141,0,0.59873811429845,0,0.635020748171649,0.973865820823666,0,0,0.313359791546046,0,0.338583555603207,0,0,0.425846237690326,0,0,0.223676107892416,0.166849141711909,0.19538809540204,1.39203086947621,7.38524393686274,2.43410110628385,0,0,0.18714054040822,0.146508179271894,0.121360521749513,0,0,0.23874448473769,0.296964680832639,0.307160702099232,0,0.422008249231538,0,0.494411622680279,0.211125408127993,0,0,0.251932747854276,0,0.123084805461069,0.311039587661807,0,0,0,0.197286811273867,0,1.11136990144637,0,0.185536196323703,0,0,0.0874599999961957,0,0,0,0.236387681767936,0.344743373241465,0,0,0,0.482385754501632,0,0.110579259931225,0,0.219385397153973,0.10893846351899,0.557694977114413,0.0769502585037971,0.113942055847001,0.23056390438806,0.0897576444097721,0.108647371922008,0,0.0915975934018623,0,0,0,0.997270091400938,9.92620906715595,15.4889402111014,10.5727599794781,52.1822764991509,1.43042921082341,0,0,0.141353071433941,0.216388639742091,0,0.265372693510018,0,0.296521128680622,0.494255755786011,0.313265848516366,0.067401132980677,0.802577647298789,0,0.364909578431332,0.19566461893209,0.485560759068186,0,0,0,0.126373159256976,0.450970258243478,0.518440956986236,0,0,0.313932918407225,0,0,0,0,0.293977192243133,0.174118413160805,0.34945333648406,0.343972064943233,0.387025325156341,1.31560770755134,0.41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| ||
|short_description=p3@UBAC1 | |short_description=p3@UBAC1 | ||
}} | }} |
Latest revision as of 11:09, 16 September 2015
Short description: | p3@UBAC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_UBAC1_5end |
Coexpression cluster: | C122_chronic_Reticulocytes_skeletal_leukemia_acute_colon_Tracheal |
Association with transcript: | 55bp_to_ENST00000478485_5end |
EntrezGene: | UBAC1 |
HGNC: | 30221 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.09e-13 | 2 |
erythroblast | 3.09e-13 | 2 |
megakaryocyte-erythroid progenitor cell | 3.09e-13 | 2 |
erythroid progenitor cell | 3.09e-13 | 2 |
reticulocyte | 3.09e-13 | 2 |
proerythroblast | 3.09e-13 | 2 |
basophilic erythroblast | 3.09e-13 | 2 |
polychromatophilic erythroblast | 3.09e-13 | 2 |
orthochromatic erythroblast | 3.09e-13 | 2 |
CD1a-positive Langerhans cell | 5.29e-13 | 2 |
immature CD1a-positive Langerhans cell | 5.29e-13 | 2 |
myeloid cell | 1.86e-10 | 108 |
common myeloid progenitor | 1.86e-10 | 108 |
hematopoietic oligopotent progenitor cell | 6.92e-07 | 161 |
hematopoietic multipotent progenitor cell | 6.92e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 1.55e-07 | 1 |
soleus muscle | 1.55e-07 | 1 |
appendage | 1.55e-07 | 1 |
lower limb segment | 1.55e-07 | 1 |
multi-limb segment region | 1.55e-07 | 1 |
hindlimb muscle | 1.55e-07 | 1 |
hindlimb zeugopod muscle | 1.55e-07 | 1 |
paired limb/fin | 1.55e-07 | 1 |
limb | 1.55e-07 | 1 |
pelvic appendage | 1.55e-07 | 1 |
limb segment | 1.55e-07 | 1 |
paired limb/fin segment | 1.55e-07 | 1 |
limb muscle | 1.55e-07 | 1 |
pelvic complex muscle | 1.55e-07 | 1 |
zeugopod | 1.55e-07 | 1 |
muscle of leg | 1.55e-07 | 1 |
paired limb/fin bud | 1.55e-07 | 1 |
limb bud | 1.55e-07 | 1 |
pelvic appendage bud | 1.55e-07 | 1 |
limb/fin field | 1.55e-07 | 1 |
subdivision of organism along appendicular axis | 1.55e-07 | 1 |
appendage girdle complex | 1.55e-07 | 1 |
leg | 1.55e-07 | 1 |
hindlimb | 1.55e-07 | 1 |
triceps surae | 1.55e-07 | 1 |
hindlimb zeugopod | 1.55e-07 | 1 |
posterior region of body | 1.55e-07 | 1 |
pelvic complex | 1.55e-07 | 1 |
limb field | 1.55e-07 | 1 |
hindlimb/pelvic fin field | 1.55e-07 | 1 |
penis | 4.85e-07 | 1 |
intromittent organ | 4.85e-07 | 1 |
lateral plate mesenchyme | 4.85e-07 | 1 |
undifferentiated genital tubercle | 4.85e-07 | 1 |
somatopleure | 4.85e-07 | 1 |
stroma of bone marrow | 9.73e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.23e-26 | 8 |
myeloid leukemia | 4.82e-14 | 31 |
leukemia | 7.55e-11 | 39 |
hematologic cancer | 6.10e-08 | 51 |
immune system cancer | 6.10e-08 | 51 |