FFCP PHASE1:Hg19::chr16:31225409..31225428,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:31225409..31225428,+
|short_description=p3@TRIM72
|description=CAGE_peak_3_at_TRIM72_5end
|association_with_transcript=0bp_to_uc002ebn.1_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=493829 | |EntrezGene=493829 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32671 | |HGNC=32671 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZMU5 | |UniProt=Q6ZMU5 | ||
|association_with_transcript=0bp_to_uc002ebn.1_5end | |||
|cluster_id=chr16:31225409..31225428,+ | |||
|coexpression_cluster_id=C737 | |||
|description=CAGE_peak_3_at_TRIM72_5end | |||
|id=chr16:31225409..31225428,+ | |||
|ontology_enrichment_celltype=CL:0000188!3.87e-15!9;CL:0000515!2.22e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000515;2.81e-22;3!CL:0000188;1.22e-19;9!CL:0000056;7.30e-17;4!CL:0000680;1.27e-16;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,1.02e-19,9;CL:0000515,8.14e-17,4;CL:0000680,8.46e-07,58;CL:0000056,8.46e-07,58;CL:0000355,8.46e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000515;7.30e-17;4!UBERON:0004874;3.28e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:12603;1.84e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,1.71e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001042!9.27e-09!10;UBERON:0009145!9.27e-09!10;UBERON:0001134!2.43e-08!61;UBERON:0002036!2.43e-08!61;UBERON:0003082!2.43e-08!61;UBERON:0002385!5.92e-08!63;UBERON:0001015!5.92e-08!63;UBERON:0000383!5.92e-08!63;UBERON:0006562!6.68e-08!11;UBERON:0008814!1.78e-07!15;UBERON:0001630!3.04e-07!2;UBERON:0005090!3.04e-07!2;UBERON:0004290!8.78e-07!70;UBERON:0000341!8.84e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;9.23e-63;16!UBERON:0002036;9.23e-63;16!UBERON:0002385;6.59e-31;31!UBERON:0001015;6.59e-31;31!UBERON:0000383;6.59e-31;31!UBERON:0005090;6.21e-16;2!UBERON:0001630;6.21e-16;2!UBERON:0000341;7.08e-15;2!UBERON:0001723;2.21e-10;3!UBERON:0001033;2.21e-10;3!UBERON:0001389;6.75e-09;1!UBERON:0000026;6.75e-09;1!UBERON:0008784;6.75e-09;1!UBERON:0006058;6.75e-09;1!UBERON:0003663;6.75e-09;1!UBERON:0004256;6.75e-09;1!UBERON:0004708;6.75e-09;1!UBERON:0002101;6.75e-09;1!UBERON:0004709;6.75e-09;1!UBERON:0002529;6.75e-09;1!UBERON:0010538;6.75e-09;1!UBERON:0003661;6.75e-09;1!UBERON:0010890;6.75e-09;1!UBERON:0002471;6.75e-09;1!UBERON:0001383;6.75e-09;1!UBERON:0010758;6.75e-09;1!UBERON:0010707;6.75e-09;1!UBERON:0000978;6.75e-09;1!UBERON:0002103;6.75e-09;1!UBERON:0001665;6.75e-09;1!UBERON:0003823;6.75e-09;1!UBERON:0000154;6.75e-09;1!UBERON:0010709;6.75e-09;1!UBERON:0002426;9.46e-09;1!UBERON:0003831;9.46e-09;1!UBERON:0003898;9.46e-09;1!UBERON:0004830;9.46e-09;1!UBERON:0003830;9.46e-09;1!UBERON:0005175;9.46e-09;1!UBERON:0001774;9.46e-09;1!UBERON:0001103;9.46e-09;1!UBERON:0000989;3.28e-08;1!UBERON:0008811;3.28e-08;1!UBERON:0002204;9.56e-07;70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,6.45e-16,2;UBERON:0001630,6.45e-16,2;UBERON:0000341,9.41e-15,2;UBERON:0001134,1.28e-14,62;UBERON:0002036,1.28e-14,62;UBERON:0003082,1.28e-14,62;UBERON:0002385,4.28e-14,64;UBERON:0001015,4.28e-14,64;UBERON:0000383,4.28e-14,64;UBERON:0002329,1.72e-12,71;UBERON:0003059,1.72e-12,71;UBERON:0007282,1.72e-12,71;UBERON:0004290,1.72e-12,71;UBERON:0009618,1.72e-12,71;UBERON:0003077,2.75e-12,72;UBERON:0007285,2.75e-12,72;UBERON:0007524,4.34e-12,73;UBERON:0007503,3.57e-11,78;UBERON:0001723,2.06e-10,3;UBERON:0001033,2.06e-10,3;UBERON:0010056,2.06e-10,3;UBERON:0000486,2.27e-10,83;UBERON:0005256,6.63e-09,122;UBERON:0005418,7.01e-09,1;UBERON:0001389,7.01e-09,1;UBERON:0000026,7.01e-09,1;UBERON:0008784,7.01e-09,1;UBERON:0006058,7.01e-09,1;UBERON:0003663,7.01e-09,1;UBERON:0004256,7.01e-09,1;UBERON:0004708,7.01e-09,1;UBERON:0002101,7.01e-09,1;UBERON:0004709,7.01e-09,1;UBERON:0002529,7.01e-09,1;UBERON:0010538,7.01e-09,1;UBERON:0003661,7.01e-09,1;UBERON:0010890,7.01e-09,1;UBERON:0002471,7.01e-09,1;UBERON:0001383,7.01e-09,1;UBERON:0004357,7.01e-09,1;UBERON:0004347,7.01e-09,1;UBERON:0005420,7.01e-09,1;UBERON:0005732,7.01e-09,1;UBERON:0010758,7.01e-09,1;UBERON:0010707,7.01e-09,1;UBERON:0000978,7.01e-09,1;UBERON:0002103,7.01e-09,1;UBERON:0001665,7.01e-09,1;UBERON:0003823,7.01e-09,1;UBERON:0000154,7.01e-09,1;UBERON:0010709,7.01e-09,1;UBERON:0005733,7.01e-09,1;UBERON:0005730,7.01e-09,1;UBERON:0002426,9.46e-09,1;UBERON:0003831,9.46e-09,1;UBERON:0003898,9.46e-09,1;UBERON:0004830,9.46e-09,1;UBERON:0003830,9.46e-09,1;UBERON:0005175,9.46e-09,1;UBERON:0001774,9.46e-09,1;UBERON:0001103,9.46e-09,1;UBERON:0010084,9.46e-09,1;UBERON:0000989,3.28e-08,1;UBERON:0008811,3.28e-08,1;UBERON:0006258,3.28e-08,1;UBERON:0005876,3.28e-08,1;UBERON:0004874,3.28e-08,1 | |||
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| ||
|short_description=p3@TRIM72 | |||
}} | }} |
Latest revision as of 11:51, 16 September 2015
Short description: | p3@TRIM72 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRIM72_5end |
Coexpression cluster: | C737_rhabdomyosarcoma_skeletal_mesenchymal_Skeletal_Pericytes_tongue_diaphragm |
Association with transcript: | 0bp_to_uc002ebn.1_5end |
EntrezGene: | TRIM72 |
HGNC: | 32671 |
UniProt: | Q6ZMU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 1.02e-19 | 9 |
skeletal muscle myoblast | 8.14e-17 | 4 |
muscle precursor cell | 8.46e-07 | 58 |
myoblast | 8.46e-07 | 58 |
multi-potent skeletal muscle stem cell | 8.46e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 1.71e-08 | 1 |