FFCP PHASE1:Hg19::chr16:31225461..31225498,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=493829 | |EntrezGene=493829 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32671 | |HGNC=32671 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZMU5 | |UniProt=Q6ZMU5 | ||
|association_with_transcript=46bp_to_uc002ebn.1_5end | |association_with_transcript=46bp_to_uc002ebn.1_5end | ||
|cluster_id=chr16:31225461..31225498,+ | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_1_at_TRIM72_5end | |description=CAGE_peak_1_at_TRIM72_5end | ||
|id=chr16:31225461..31225498,+ | |id=chr16:31225461..31225498,+ | ||
|ontology_enrichment_celltype=CL:0000188!1.30e-22!9;CL:0000515!2.29e-11!4;CL:0000594!3.51e-08!3 | |ontology_enrichment_celltype=CL:0000188!1.30e-22!9;CL:0000515!2.29e-11!4;CL:0000594!3.51e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000188;4.99e-35;9!CL:0000680;9.43e-26;7!CL:0000056;6.32e-21;4!CL:0000515;1.97e-16;3!CL:0000594;1.37e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,4.17e-35,9;CL:0000515,6.16e-21,4;CL:0000680,1.31e-08,58;CL:0000056,1.31e-08,58;CL:0000355,1.31e-08,58;CL:0000594,1.32e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000515;6.32e-21;4!UBERON:0004874;8.67e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.85e-13!115;UBERON:0001134!1.08e-09!61;UBERON:0002036!1.08e-09!61;UBERON:0003082!1.08e-09!61;UBERON:0002385!3.07e-09!63;UBERON:0001015!3.07e-09!63;UBERON:0000383!3.07e-09!63;UBERON:0004290!7.17e-08!70;UBERON:0001630!5.77e-07!2;UBERON:0005090!5.77e-07!2;UBERON:0000341!9.22e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.79e-70;16!UBERON:0002036;1.79e-70;16!UBERON:0002385;3.86e-34;31!UBERON:0001015;3.86e-34;31!UBERON:0000383;3.86e-34;31!UBERON:0005090;3.00e-12;2!UBERON:0001630;3.00e-12;2!UBERON:0000341;7.72e-12;2!UBERON:0003127;3.12e-11;2!UBERON:0001723;2.58e-08;3!UBERON:0001033;2.58e-08;3!UBERON:0002204;3.71e-07;70!UBERON:0001389;5.58e-07;1!UBERON:0000026;5.58e-07;1!UBERON:0008784;5.58e-07;1!UBERON:0006058;5.58e-07;1!UBERON:0003663;5.58e-07;1!UBERON:0004256;5.58e-07;1!UBERON:0004708;5.58e-07;1!UBERON:0002101;5.58e-07;1!UBERON:0004709;5.58e-07;1!UBERON:0002529;5.58e-07;1!UBERON:0010538;5.58e-07;1!UBERON:0003661;5.58e-07;1!UBERON:0010890;5.58e-07;1!UBERON:0002471;5.58e-07;1!UBERON:0001383;5.58e-07;1!UBERON:0010758;5.58e-07;1!UBERON:0010707;5.58e-07;1!UBERON:0000978;5.58e-07;1!UBERON:0002103;5.58e-07;1!UBERON:0001665;5.58e-07;1!UBERON:0003823;5.58e-07;1!UBERON:0000154;5.58e-07;1!UBERON:0010709;5.58e-07;1!UBERON:0002426;6.23e-07;1!UBERON:0003831;6.23e-07;1!UBERON:0003898;6.23e-07;1!UBERON:0004830;6.23e-07;1!UBERON:0003830;6.23e-07;1!UBERON:0005175;6.23e-07;1!UBERON:0001774;6.23e-07;1!UBERON:0001103;6.23e-07;1!UBERON:0000989;8.67e-07;1!UBERON:0008811;8.67e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,9.04e-16,62;UBERON:0002036,9.04e-16,62;UBERON:0003082,9.04e-16,62;UBERON:0002385,3.55e-15,64;UBERON:0001015,3.55e-15,64;UBERON:0000383,3.55e-15,64;UBERON:0002329,2.32e-13,71;UBERON:0003059,2.32e-13,71;UBERON:0007282,2.32e-13,71;UBERON:0004290,2.32e-13,71;UBERON:0009618,2.32e-13,71;UBERON:0003077,3.95e-13,72;UBERON:0007285,3.95e-13,72;UBERON:0007524,6.62e-13,73;UBERON:0005090,3.00e-12,2;UBERON:0001630,3.00e-12,2;UBERON:0007503,7.14e-12,78;UBERON:0000341,7.52e-12,2;UBERON:0005256,2.92e-11,122;UBERON:0003127,4.05e-11,2;UBERON:0000486,5.77e-11,83;UBERON:0003104,1.29e-08,160;UBERON:0009142,1.29e-08,160;UBERON:0001723,2.58e-08,3;UBERON:0001033,2.58e-08,3;UBERON:0010056,2.58e-08,3;UBERON:0002100,8.45e-08,199;UBERON:0000490,1.77e-07,148;UBERON:0005418,5.58e-07,1;UBERON:0001389,5.58e-07,1;UBERON:0000026,5.58e-07,1;UBERON:0008784,5.58e-07,1;UBERON:0006058,5.58e-07,1;UBERON:0003663,5.58e-07,1;UBERON:0004256,5.58e-07,1;UBERON:0004708,5.58e-07,1;UBERON:0002101,5.58e-07,1;UBERON:0004709,5.58e-07,1;UBERON:0002529,5.58e-07,1;UBERON:0010538,5.58e-07,1;UBERON:0003661,5.58e-07,1;UBERON:0010890,5.58e-07,1;UBERON:0002471,5.58e-07,1;UBERON:0001383,5.58e-07,1;UBERON:0004357,5.58e-07,1;UBERON:0004347,5.58e-07,1;UBERON:0005420,5.58e-07,1;UBERON:0005732,5.58e-07,1;UBERON:0010758,5.58e-07,1;UBERON:0010707,5.58e-07,1;UBERON:0000978,5.58e-07,1;UBERON:0002103,5.58e-07,1;UBERON:0001665,5.58e-07,1;UBERON:0003823,5.58e-07,1;UBERON:0000154,5.58e-07,1;UBERON:0010709,5.58e-07,1;UBERON:0005733,5.58e-07,1;UBERON:0005730,5.58e-07,1;UBERON:0002426,6.23e-07,1;UBERON:0003831,6.23e-07,1;UBERON:0003898,6.23e-07,1;UBERON:0004830,6.23e-07,1;UBERON:0003830,6.23e-07,1;UBERON:0005175,6.23e-07,1;UBERON:0001774,6.23e-07,1;UBERON:0001103,6.23e-07,1;UBERON:0010084,6.23e-07,1;UBERON:0000989,8.67e-07,1;UBERON:0008811,8.67e-07,1;UBERON:0006258,8.67e-07,1;UBERON:0005876,8.67e-07,1;UBERON:0004874,8.67e-07,1 | |||
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| ||
|short_description=p1@TRIM72 | |short_description=p1@TRIM72 | ||
}} | }} |
Latest revision as of 11:52, 16 September 2015
Short description: | p1@TRIM72 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRIM72_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 46bp_to_uc002ebn.1_5end |
EntrezGene: | TRIM72 |
HGNC: | 32671 |
UniProt: | Q6ZMU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 4.17e-35 | 9 |
skeletal muscle myoblast | 6.16e-21 | 4 |
muscle precursor cell | 1.31e-08 | 58 |
myoblast | 1.31e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.31e-08 | 58 |
skeletal muscle satellite cell | 1.32e-07 | 3 |