FFCP PHASE1:Hg19::chr3:16327876..16327886,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92106 | |EntrezGene=92106 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=25128 | |HGNC=25128 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=16bp_to_AL832787_5end | |association_with_transcript=16bp_to_AL832787_5end | ||
|cluster_id=chr3:16327876..16327886,+ | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_5_at_OXNAD1_5end | |description=CAGE_peak_5_at_OXNAD1_5end | ||
|id=chr3:16327876..16327886,+ | |id=chr3:16327876..16327886,+ | ||
|ontology_enrichment_celltype=CL:0000791!2.05e-28!18;CL:0000789!2.05e-28!18;CL:0002420!2.05e-28!18;CL:0002419!2.05e-28!18;CL:0000790!2.05e-28!18;CL:0000084!6.71e-28!25;CL:0000827!6.71e-28!25;CL:0000738!4.49e-19!140;CL:0000625!8.50e-18!11;CL:0000838!5.42e-16!52;CL:0000542!1.59e-15!53;CL:0000051!1.59e-15!53;CL:0000037!1.44e-14!172;CL:0000566!1.44e-14!172;CL:0000988!7.08e-13!182;CL:0002032!8.84e-12!165;CL:0000837!8.84e-12!165;CL:0002087!1.78e-11!119;CL:0000624!4.09e-11!6;CL:0002031!4.53e-10!124;CL:0000451!2.61e-09!10;CL:0000990!4.77e-07!8 | |ontology_enrichment_celltype=CL:0000791!2.05e-28!18;CL:0000789!2.05e-28!18;CL:0002420!2.05e-28!18;CL:0002419!2.05e-28!18;CL:0000790!2.05e-28!18;CL:0000084!6.71e-28!25;CL:0000827!6.71e-28!25;CL:0000738!4.49e-19!140;CL:0000625!8.50e-18!11;CL:0000838!5.42e-16!52;CL:0000542!1.59e-15!53;CL:0000051!1.59e-15!53;CL:0000037!1.44e-14!172;CL:0000566!1.44e-14!172;CL:0000988!7.08e-13!182;CL:0002032!8.84e-12!165;CL:0000837!8.84e-12!165;CL:0002087!1.78e-11!119;CL:0000624!4.09e-11!6;CL:0002031!4.53e-10!124;CL:0000451!2.61e-09!10;CL:0000990!4.77e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.56e-48;18!CL:0000789;1.56e-48;18!CL:0002419;1.56e-48;18!CL:0000084;5.30e-42;25!CL:0000625;4.15e-33;11!CL:0000624;4.07e-20;6!CL:0000542;3.59e-14;53!CL:0000898;8.43e-11;3!CL:0000226;8.57e-11;3!CL:0000842;8.57e-11;3!CL:0000623;2.19e-10;3!CL:0000767;3.63e-09;3!CL:0000094;7.97e-09;8!CL:0000815;9.89e-08;2!CL:0000792;9.89e-08;2!CL:0002677;9.89e-08;2!CL:0002087;8.41e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.62e-48,18;CL:0000789,1.62e-48,18;CL:0002420,1.62e-48,18;CL:0002419,1.62e-48,18;CL:0000790,1.62e-48,18;CL:0000084,6.06e-42,25;CL:0000827,6.06e-42,25;CL:0000625,4.10e-33,11;CL:0000838,1.41e-26,52;CL:0000542,5.89e-26,53;CL:0000051,5.89e-26,53;CL:0000738,4.73e-23,136;CL:0000624,4.28e-20,6;CL:0000037,7.66e-17,168;CL:0002087,1.11e-16,115;CL:0000988,1.66e-15,177;CL:0002032,2.75e-13,161;CL:0000837,2.75e-13,161;CL:0002031,6.83e-12,120;CL:0000226,8.58e-11,3;CL:0000842,8.58e-11,3;CL:0000898,8.86e-11,3;CL:0000623,2.30e-10,3;CL:0000825,2.30e-10,3;CL:0000767,3.64e-09,3;CL:0000094,7.70e-09,8;CL:0000815,1.02e-07,2;CL:0000792,1.02e-07,2;CL:0002677,1.02e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.56e-48;18!CL:0000051;3.59e-14;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.41e-12!115;UBERON:0000178!3.28e-11!15;UBERON:0000179!3.28e-11!15;UBERON:0000463!3.28e-11!15;UBERON:0004177!1.85e-07!7;UBERON:0002370!9.83e-07!4;UBERON:0005058!9.83e-07!4;UBERON:0009113!9.83e-07!4;UBERON:0003295!9.83e-07!4;UBERON:0005562!9.83e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.62e-15;15!UBERON:0000179;7.62e-15;15!UBERON:0000463;7.62e-15;15!UBERON:0002390;9.12e-09;32!UBERON:0002193;1.94e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.50e-15,15;UBERON:0000179,7.50e-15,15;UBERON:0000463,7.50e-15,15;UBERON:0002370,3.78e-07,4;UBERON:0005058,3.78e-07,4;UBERON:0009113,3.78e-07,4;UBERON:0003295,3.78e-07,4;UBERON:0005562,3.78e-07,4 | |||
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| ||
|short_description=p5@OXNAD1 | |short_description=p5@OXNAD1 | ||
}} | }} |
Latest revision as of 12:03, 16 September 2015
Short description: | p5@OXNAD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_OXNAD1_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | 16bp_to_AL832787_5end |
EntrezGene: | OXNAD1 |
HGNC: | 25128 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.62e-48 | 18 |
alpha-beta T cell | 1.62e-48 | 18 |
immature T cell | 1.62e-48 | 18 |
mature T cell | 1.62e-48 | 18 |
immature alpha-beta T cell | 1.62e-48 | 18 |
T cell | 6.06e-42 | 25 |
pro-T cell | 6.06e-42 | 25 |
CD8-positive, alpha-beta T cell | 4.10e-33 | 11 |
lymphoid lineage restricted progenitor cell | 1.41e-26 | 52 |
lymphocyte | 5.89e-26 | 53 |
common lymphoid progenitor | 5.89e-26 | 53 |
leukocyte | 4.73e-23 | 136 |
CD4-positive, alpha-beta T cell | 4.28e-20 | 6 |
hematopoietic stem cell | 7.66e-17 | 168 |
nongranular leukocyte | 1.11e-16 | 115 |
hematopoietic cell | 1.66e-15 | 177 |
hematopoietic oligopotent progenitor cell | 2.75e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.75e-13 | 161 |
hematopoietic lineage restricted progenitor cell | 6.83e-12 | 120 |
single nucleate cell | 8.58e-11 | 3 |
mononuclear cell | 8.58e-11 | 3 |
naive T cell | 8.86e-11 | 3 |
natural killer cell | 2.30e-10 | 3 |
pro-NK cell | 2.30e-10 | 3 |
basophil | 3.64e-09 | 3 |
granulocyte | 7.70e-09 | 8 |
regulatory T cell | 1.02e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.02e-07 | 2 |
naive regulatory T cell | 1.02e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 7.50e-15 | 15 |
haemolymphatic fluid | 7.50e-15 | 15 |
organism substance | 7.50e-15 | 15 |
thymus | 3.78e-07 | 4 |
hemolymphoid system gland | 3.78e-07 | 4 |
thymic region | 3.78e-07 | 4 |
pharyngeal gland | 3.78e-07 | 4 |
thymus primordium | 3.78e-07 | 4 |