FFCP PHASE1:Hg19::chr2:24930425..24930435,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8648 | |EntrezGene=8648 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7668 | |HGNC=7668 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-160bp_to_ENST00000486198_5end | |association_with_transcript=-160bp_to_ENST00000486198_5end | ||
|cluster_id=chr2:24930425..24930435,+ | |||
|coexpression_cluster_id=C13 | |coexpression_cluster_id=C13 | ||
|description=CAGE_peak_4_at_NCOA1_5end | |description=CAGE_peak_4_at_NCOA1_5end | ||
|id=chr2:24930425..24930435,+ | |id=chr2:24930425..24930435,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.38e-07!42;CL:0000860!5.54e-07!45 | |ontology_enrichment_celltype=CL:0002057!1.38e-07!42;CL:0000860!5.54e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000775;8.44e-13;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,9.43e-13,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.05e-11;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.98e-13!115;UBERON:0001049!5.02e-12!57;UBERON:0005068!5.02e-12!57;UBERON:0006241!5.02e-12!57;UBERON:0007135!5.02e-12!57;UBERON:0002616!1.49e-11!59;UBERON:0002020!2.34e-11!34;UBERON:0003528!2.34e-11!34;UBERON:0001893!5.07e-11!34;UBERON:0001869!8.04e-11!32;UBERON:0002791!8.08e-11!33;UBERON:0001017!9.78e-11!82;UBERON:0000955!1.53e-10!69;UBERON:0006238!1.53e-10!69;UBERON:0002619!5.68e-10!22;UBERON:0002780!8.65e-10!41;UBERON:0001890!8.65e-10!41;UBERON:0006240!8.65e-10!41;UBERON:0005743!3.17e-09!86;UBERON:0003080!3.20e-09!42;UBERON:0001950!1.08e-08!20;UBERON:0000073!1.18e-08!94;UBERON:0001016!1.18e-08!94;UBERON:0000956!3.40e-08!25;UBERON:0000203!3.40e-08!25;UBERON:0003075!1.05e-07!86;UBERON:0007284!1.05e-07!86;UBERON:0002346!2.57e-07!90 | |ontology_enrichment_uberon=UBERON:0007023!2.98e-13!115;UBERON:0001049!5.02e-12!57;UBERON:0005068!5.02e-12!57;UBERON:0006241!5.02e-12!57;UBERON:0007135!5.02e-12!57;UBERON:0002616!1.49e-11!59;UBERON:0002020!2.34e-11!34;UBERON:0003528!2.34e-11!34;UBERON:0001893!5.07e-11!34;UBERON:0001869!8.04e-11!32;UBERON:0002791!8.08e-11!33;UBERON:0001017!9.78e-11!82;UBERON:0000955!1.53e-10!69;UBERON:0006238!1.53e-10!69;UBERON:0002619!5.68e-10!22;UBERON:0002780!8.65e-10!41;UBERON:0001890!8.65e-10!41;UBERON:0006240!8.65e-10!41;UBERON:0005743!3.17e-09!86;UBERON:0003080!3.20e-09!42;UBERON:0001950!1.08e-08!20;UBERON:0000073!1.18e-08!94;UBERON:0001016!1.18e-08!94;UBERON:0000956!3.40e-08!25;UBERON:0000203!3.40e-08!25;UBERON:0003075!1.05e-07!86;UBERON:0007284!1.05e-07!86;UBERON:0002346!2.57e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.89e-22;22!UBERON:0000956;4.17e-19;25!UBERON:0000203;4.17e-19;25!UBERON:0003528;5.78e-17;34!UBERON:0002020;5.78e-17;34!UBERON:0001950;5.79e-17;20!UBERON:0001869;6.10e-16;32!UBERON:0002791;2.16e-15;32!UBERON:0001871;1.19e-13;6!UBERON:0001893;2.18e-13;34!UBERON:0002780;4.19e-11;41!UBERON:0001890;4.19e-11;41!UBERON:0000073;1.31e-10;53!UBERON:0002616;1.31e-10;53!UBERON:0002771;7.20e-09;2!UBERON:0001954;2.31e-08;2!UBERON:0003022;2.31e-08;2!UBERON:0002421;2.31e-08;2!UBERON:0002600;2.31e-08;2!UBERON:0000349;3.40e-07;5!UBERON:0000955;7.25e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,4.65e-22,22;UBERON:0000956,3.39e-19,25;UBERON:0000203,3.39e-19,25;UBERON:0003528,1.71e-18,34;UBERON:0002020,1.71e-18,34;UBERON:0002791,3.98e-17,32;UBERON:0001869,3.98e-17,32;UBERON:0001950,6.38e-17,20;UBERON:0000073,1.87e-16,53;UBERON:0002616,1.87e-16,53;UBERON:0001893,5.64e-16,34;UBERON:0001049,2.26e-15,56;UBERON:0005068,2.26e-15,56;UBERON:0006241,2.26e-15,56;UBERON:0007135,2.26e-15,56;UBERON:0001871,1.50e-13,6;UBERON:0002780,8.14e-13,41;UBERON:0001890,8.14e-13,41;UBERON:0003080,8.14e-13,41;UBERON:0006240,8.14e-13,41;UBERON:0000955,9.16e-12,68;UBERON:0006238,9.16e-12,68;UBERON:0003075,1.29e-10,82;UBERON:0007284,1.29e-10,82;UBERON:0001017,1.36e-10,81;UBERON:0002346,6.18e-10,86;UBERON:0001016,3.75e-09,89;UBERON:0003056,4.07e-09,61;UBERON:0002771,1.18e-08,2;UBERON:0001954,1.18e-08,2;UBERON:0003022,1.18e-08,2;UBERON:0002421,1.18e-08,2;UBERON:0002600,1.18e-08,2;UBERON:0010371,1.39e-08,104;UBERON:0000349,1.75e-07,5 | |||
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| ||
|short_description=p4@NCOA1 | |short_description=p4@NCOA1 | ||
}} | }} |
Latest revision as of 13:08, 16 September 2015
Short description: | p4@NCOA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NCOA1_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -160bp_to_ENST00000486198_5end |
EntrezGene: | NCOA1 |
HGNC: | 7668 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 9.43e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 4.65e-22 | 22 |
cerebral cortex | 3.39e-19 | 25 |
pallium | 3.39e-19 | 25 |
brain grey matter | 1.71e-18 | 34 |
gray matter | 1.71e-18 | 34 |
regional part of telencephalon | 3.98e-17 | 32 |
cerebral hemisphere | 3.98e-17 | 32 |
neocortex | 6.38e-17 | 20 |
regional part of nervous system | 1.87e-16 | 53 |
regional part of brain | 1.87e-16 | 53 |
telencephalon | 5.64e-16 | 34 |
neural tube | 2.26e-15 | 56 |
neural rod | 2.26e-15 | 56 |
future spinal cord | 2.26e-15 | 56 |
neural keel | 2.26e-15 | 56 |
temporal lobe | 1.50e-13 | 6 |
regional part of forebrain | 8.14e-13 | 41 |
forebrain | 8.14e-13 | 41 |
anterior neural tube | 8.14e-13 | 41 |
future forebrain | 8.14e-13 | 41 |
brain | 9.16e-12 | 68 |
future brain | 9.16e-12 | 68 |
neural plate | 1.29e-10 | 82 |
presumptive neural plate | 1.29e-10 | 82 |
central nervous system | 1.36e-10 | 81 |
neurectoderm | 6.18e-10 | 86 |
nervous system | 3.75e-09 | 89 |
pre-chordal neural plate | 4.07e-09 | 61 |
middle temporal gyrus | 1.18e-08 | 2 |
Ammon's horn | 1.18e-08 | 2 |
lobe parts of cerebral cortex | 1.18e-08 | 2 |
hippocampal formation | 1.18e-08 | 2 |
limbic lobe | 1.18e-08 | 2 |
ecto-epithelium | 1.39e-08 | 104 |
limbic system | 1.75e-07 | 5 |