FFCP PHASE1:Hg19::chr14:93118883..93118894,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79890 | |EntrezGene=79890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18751 | |HGNC=18751 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TB24 | |UniProt=Q8TB24 | ||
|association_with_transcript=37bp_to_AK074176_5end | |association_with_transcript=37bp_to_AK074176_5end | ||
|cluster_id=chr14:93118883..93118894,+ | |||
|coexpression_cluster_id=C462 | |||
|description=CAGE_peak_25_at_RIN3_5end | |description=CAGE_peak_25_at_RIN3_5end | ||
|id=chr14:93118883..93118894,+ | |id=chr14:93118883..93118894,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.81e-57!76;CL:0000557!1.10e-48!71;CL:0000839!2.50e-47!70;CL:0002009!9.58e-42!65;CL:0002194!2.90e-41!63;CL:0000576!2.90e-41!63;CL:0000040!2.90e-41!63;CL:0000559!2.90e-41!63;CL:0000738!5.21e-36!140;CL:0000763!1.42e-35!112;CL:0000049!1.42e-35!112;CL:0002057!7.46e-30!42;CL:0002031!3.47e-28!124;CL:0000860!2.83e-27!45;CL:0000037!4.33e-26!172;CL:0000566!4.33e-26!172;CL:0002087!1.73e-25!119;CL:0002032!1.80e-25!165;CL:0000837!1.80e-25!165;CL:0000988!1.01e-23!182;CL:0002393!8.39e-14!9;CL:0002397!8.39e-14!9;CL:0002274!2.56e-10!5;CL:0000457!2.56e-10!5;CL:0002191!2.56e-10!5;CL:0000097!2.56e-10!5;CL:0000831!2.56e-10!5;CL:0002028!2.56e-10!5;CL:0000094!2.43e-09!8;CL:0000235!7.30e-08!10;CL:0002619!1.06e-07!3;CL:0000767!4.51e-07!3;CL:0000875!5.97e-07!3;CL:0002396!5.97e-07!3 | |ontology_enrichment_celltype=CL:0000766!1.81e-57!76;CL:0000557!1.10e-48!71;CL:0000839!2.50e-47!70;CL:0002009!9.58e-42!65;CL:0002194!2.90e-41!63;CL:0000576!2.90e-41!63;CL:0000040!2.90e-41!63;CL:0000559!2.90e-41!63;CL:0000738!5.21e-36!140;CL:0000763!1.42e-35!112;CL:0000049!1.42e-35!112;CL:0002057!7.46e-30!42;CL:0002031!3.47e-28!124;CL:0000860!2.83e-27!45;CL:0000037!4.33e-26!172;CL:0000566!4.33e-26!172;CL:0002087!1.73e-25!119;CL:0002032!1.80e-25!165;CL:0000837!1.80e-25!165;CL:0000988!1.01e-23!182;CL:0002393!8.39e-14!9;CL:0002397!8.39e-14!9;CL:0002274!2.56e-10!5;CL:0000457!2.56e-10!5;CL:0002191!2.56e-10!5;CL:0000097!2.56e-10!5;CL:0000831!2.56e-10!5;CL:0002028!2.56e-10!5;CL:0000094!2.43e-09!8;CL:0000235!7.30e-08!10;CL:0002619!1.06e-07!3;CL:0000767!4.51e-07!3;CL:0000875!5.97e-07!3;CL:0002396!5.97e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000235;3.31e-53;6!CL:0002619;3.25e-27;3!CL:0000094;1.97e-17;8!CL:0000766;6.71e-14;69!CL:0000081;9.61e-13;11!CL:0000767;2.52e-12;3!CL:0000473;2.13e-09;39!CL:0000234;2.13e-09;39!CL:0000763;5.48e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,4.16e-53,6;CL:0000766,7.20e-36,72;CL:0002619,2.98e-27,3;CL:0000839,2.29e-23,66;CL:0000763,4.63e-23,108;CL:0000049,4.63e-23,108;CL:0000557,5.47e-23,67;CL:0002194,1.46e-22,59;CL:0000576,1.46e-22,59;CL:0000040,1.46e-22,59;CL:0000559,1.46e-22,59;CL:0002009,9.19e-22,61;CL:0000738,5.82e-20,136;CL:0000094,1.85e-17,8;CL:0000037,1.37e-15,168;CL:0000988,1.21e-14,177;CL:0002032,1.56e-14,161;CL:0000837,1.56e-14,161;CL:0000473,1.43e-13,48;CL:0000234,1.43e-13,48;CL:0000081,9.18e-13,11;CL:0002087,2.02e-12,115;CL:0000767,2.52e-12,3;CL:0002031,7.20e-12,120 | |||
|ontology_enrichment_development_v019=UBERON:0010226;7.22e-10;1!CL:0000049;3.42e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.23e-41!80;UBERON:0002390!3.37e-41!102;UBERON:0003061!3.37e-41!102;UBERON:0001474!9.32e-38!86;UBERON:0002193!4.09e-36!112;UBERON:0002405!3.80e-33!115;UBERON:0004765!4.34e-30!101;UBERON:0001434!4.34e-30!101;UBERON:0002204!2.07e-15!167;UBERON:0003081!2.11e-15!216;UBERON:0007023!7.98e-07!115 | |ontology_enrichment_uberon=UBERON:0002371!1.23e-41!80;UBERON:0002390!3.37e-41!102;UBERON:0003061!3.37e-41!102;UBERON:0001474!9.32e-38!86;UBERON:0002193!4.09e-36!112;UBERON:0002405!3.80e-33!115;UBERON:0004765!4.34e-30!101;UBERON:0001434!4.34e-30!101;UBERON:0002204!2.07e-15!167;UBERON:0003081!2.11e-15!216;UBERON:0007023!7.98e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002084;7.22e-10;1!UBERON:0002171;7.22e-10;1!UBERON:0002082;7.22e-10;1!UBERON:0006518;7.22e-10;1!UBERON:0008949;7.22e-10;1!UBERON:0000101;7.22e-10;1!UBERON:0002167;7.22e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.03e-20,76;UBERON:0001474,2.09e-18,82;UBERON:0002390,2.15e-17,98;UBERON:0003061,2.15e-17,98;UBERON:0004765,1.41e-16,90;UBERON:0002405,5.69e-16,93;UBERON:0002193,1.46e-15,108;UBERON:0001434,1.07e-14,100;UBERON:0002084,6.33e-10,1;UBERON:0002082,6.33e-10,1;UBERON:0010226,6.33e-10,1;UBERON:0002171,7.55e-10,1;UBERON:0006518,7.55e-10,1;UBERON:0008949,7.55e-10,1;UBERON:0000101,7.55e-10,1;UBERON:0002167,7.55e-10,1;UBERON:0003081,2.96e-08,203;UBERON:0002204,7.21e-08,167;UBERON:0002384,5.37e-07,371 | |||
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| ||
|short_description=p25@RIN3 | |short_description=p25@RIN3 | ||
}} | }} |
Latest revision as of 15:09, 16 September 2015
Short description: | p25@RIN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_RIN3_5end |
Coexpression cluster: | C462_CD14_Monocytederived_Macrophage_Hepatic_Dendritic_lung_adipose |
Association with transcript: | 37bp_to_AK074176_5end |
EntrezGene: | RIN3 |
HGNC: | 18751 |
UniProt: | Q8TB24 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 4.16e-53 | 6 |
myeloid leukocyte | 7.20e-36 | 72 |
adult endothelial progenitor cell | 2.98e-27 | 3 |
myeloid lineage restricted progenitor cell | 2.29e-23 | 66 |
myeloid cell | 4.63e-23 | 108 |
common myeloid progenitor | 4.63e-23 | 108 |
granulocyte monocyte progenitor cell | 5.47e-23 | 67 |
monopoietic cell | 1.46e-22 | 59 |
monocyte | 1.46e-22 | 59 |
monoblast | 1.46e-22 | 59 |
promonocyte | 1.46e-22 | 59 |
macrophage dendritic cell progenitor | 9.19e-22 | 61 |
leukocyte | 5.82e-20 | 136 |
granulocyte | 1.85e-17 | 8 |
hematopoietic stem cell | 1.37e-15 | 168 |
hematopoietic cell | 1.21e-14 | 177 |
hematopoietic oligopotent progenitor cell | 1.56e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.56e-14 | 161 |
defensive cell | 1.43e-13 | 48 |
phagocyte | 1.43e-13 | 48 |
blood cell | 9.18e-13 | 11 |
nongranular leukocyte | 2.02e-12 | 115 |
basophil | 2.52e-12 | 3 |
hematopoietic lineage restricted progenitor cell | 7.20e-12 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.03e-20 | 76 |
bone element | 2.09e-18 | 82 |
hematopoietic system | 2.15e-17 | 98 |
blood island | 2.15e-17 | 98 |
skeletal element | 1.41e-16 | 90 |
immune system | 5.69e-16 | 93 |
hemolymphoid system | 1.46e-15 | 108 |
skeletal system | 1.07e-14 | 100 |
heart left ventricle | 6.33e-10 | 1 |
cardiac ventricle | 6.33e-10 | 1 |
future cardiac ventricle | 6.33e-10 | 1 |
lower lobe of right lung | 7.55e-10 | 1 |
right lung lobe | 7.55e-10 | 1 |
lower lobe of lung | 7.55e-10 | 1 |
lobe of lung | 7.55e-10 | 1 |
right lung | 7.55e-10 | 1 |
lateral plate mesoderm | 2.96e-08 | 203 |
musculoskeletal system | 7.21e-08 | 167 |
connective tissue | 5.37e-07 | 371 |