FFCP PHASE2:Hg19::chr8:134087265..134087279,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:6503 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:10902 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=6503 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=10902 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=E5RH80 | ||
|association_with_transcript=0bp_to_ENST00000518594,ENST00000520106,ENST00000522432_5end | |association_with_transcript=0bp_to_ENST00000518594,ENST00000520106,ENST00000522432_5end | ||
|cluster_id=chr8:134087265..134087279,- | |cluster_id=chr8:134087265..134087279,- | ||
Latest revision as of 15:15, 16 September 2015
| Short description: | p1@SLA |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_SLA_5end |
| Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
| Association with transcript: | 0bp_to_ENST00000518594, ENST00000520106, ENST00000522432_5end |
| EntrezGene: | SLA |
| HGNC: | 10902 |
| UniProt: | E5RH80 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@SLA |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic stem cell | 2.89e-66 | 168 |
| leukocyte | 5.62e-64 | 136 |
| hematopoietic oligopotent progenitor cell | 2.02e-62 | 161 |
| hematopoietic multipotent progenitor cell | 2.02e-62 | 161 |
| hematopoietic cell | 5.53e-60 | 177 |
| nongranular leukocyte | 9.10e-54 | 115 |
| hematopoietic lineage restricted progenitor cell | 2.90e-53 | 120 |
| myeloid leukocyte | 3.63e-48 | 72 |
| myeloid cell | 1.80e-46 | 108 |
| common myeloid progenitor | 1.80e-46 | 108 |
Showing 1 to 10 of 37 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 5.41e-48 | 98 |
| blood island | 5.41e-48 | 98 |
| hemolymphoid system | 4.73e-43 | 108 |
| bone marrow | 1.85e-37 | 76 |
| immune system | 8.42e-36 | 93 |
| adult organism | 5.89e-33 | 114 |
| bone element | 1.38e-32 | 82 |
| skeletal element | 3.53e-27 | 90 |
| skeletal system | 2.15e-22 | 100 |
| lateral plate mesoderm | 1.72e-12 | 203 |
Showing 1 to 10 of 25 entries
