FFCP PHASE1:Hg19::chr11:12696071..12696086,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:12696071..12696086,+
|short_description=p3@TEAD1
|description=CAGE_peak_3_at_TEAD1_5end
|association_with_transcript=-51bp_to_ENST00000527636_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7003 | |EntrezGene=7003 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11714 | |HGNC=11714 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-51bp_to_ENST00000527636_5end | |||
|cluster_id=chr11:12696071..12696086,+ | |||
|description=CAGE_peak_3_at_TEAD1_5end | |||
|id=chr11:12696071..12696086,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.20e-27!180;CL:0000057!4.39e-15!75;CL:0000680!7.94e-09!57;CL:0000056!7.94e-09!57;CL:0000355!7.94e-09!57;CL:0000187!5.95e-08!54;CL:0000393!1.14e-07!60;CL:0000211!1.14e-07!60;CL:0000220!1.33e-07!246;CL:0002321!1.47e-07!248;CL:0000192!6.74e-07!42;CL:0000514!6.74e-07!42;CL:0002620!7.14e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.26e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.20e-12,76;CL:0000680,3.68e-08,58;CL:0000056,3.68e-08,58;CL:0000355,3.68e-08,58;CL:0002620,1.01e-07,23;CL:0000187,4.05e-07,55;CL:0000393,4.86e-07,61;CL:0000211,4.86e-07,61;CL:0000136,9.26e-07,15;CL:0000349,9.72e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.71e-10!83;UBERON:0002329!1.71e-10!83;UBERON:0003077!1.71e-10!83;UBERON:0003059!1.71e-10!83;UBERON:0007282!1.71e-10!83;UBERON:0009618!1.71e-10!83;UBERON:0007285!1.71e-10!83;UBERON:0000475!2.71e-10!365;UBERON:0002100!4.89e-10!216;UBERON:0005256!1.21e-09!143;UBERON:0000486!1.35e-09!82;UBERON:0003104!1.50e-09!238;UBERON:0009142!1.50e-09!238;UBERON:0004290!2.72e-09!70;UBERON:0002385!4.09e-09!63;UBERON:0001015!4.09e-09!63;UBERON:0000383!4.09e-09!63;UBERON:0001134!5.83e-09!61;UBERON:0002036!5.83e-09!61;UBERON:0003082!5.83e-09!61;UBERON:0003102!3.97e-08!95;UBERON:0000481!6.66e-08!347;UBERON:0004923!1.33e-07!57;UBERON:0002199!4.48e-07!45;UBERON:0002416!4.48e-07!45;UBERON:0002097!6.88e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.39e-07;6!UBERON:0002358;3.39e-07;6!UBERON:0003684;3.39e-07;6!UBERON:0001178;3.39e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,6.57e-09,73;UBERON:0002329,9.68e-09,71;UBERON:0003059,9.68e-09,71;UBERON:0007282,9.68e-09,71;UBERON:0004290,9.68e-09,71;UBERON:0009618,9.68e-09,71;UBERON:0003077,1.89e-08,72;UBERON:0007285,1.89e-08,72;UBERON:0002385,3.16e-08,64;UBERON:0001015,3.16e-08,64;UBERON:0000383,3.16e-08,64;UBERON:0001134,3.47e-08,62;UBERON:0002036,3.47e-08,62;UBERON:0003082,3.47e-08,62;UBERON:0000486,4.90e-08,83;UBERON:0007503,2.23e-07,78;UBERON:0004923,2.37e-07,66;UBERON:0003688,3.18e-07,6;UBERON:0002358,3.18e-07,6;UBERON:0003684,3.18e-07,6;UBERON:0001178,3.18e-07,6;UBERON:0002199,7.08e-07,46;UBERON:0002416,7.08e-07,46;UBERON:0005631,9.44e-07,14;UBERON:0000158,9.44e-07,14 | |||
|phase1_expression=5.99538651592837,4.92431204949261,7.75249222527841,12.0087958023756,7.15137751083661,6.10636966870258,2.53299878168311,0,1.04474251279935,1.22866968250754,0,2.83973783769224,0.791300934685361,0,1.32558950291166,2.01697543935533,1.20538905604795,1.46062018077475,2.43966399395253,1.72369481307503,3.87601313364081,0.940364164434263,1.43117993565528,1.64249310087461,1.63205431473244,0,0,0,0,0,0.154816123316076,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,3.83587685530591,1.0843174571537,2.50668955317945,2.89693037921647,0.795285947051099,0.973269740605272,1.22895262313288,2.21729397462564,3.33772185633879,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0,3.97577561356255,2.40597972162702,1.58891016975863,2.86836620748814,0.709336764396714,2.80338800071154,1.06748995729705,0.98667019366864,3.42332138939743,0.808264032418128,1.14423332179421,4.23800797405808,4.03323147135999,1.40592859100278,0,0,0.298897361103602,0.23486899728753,1.29498355494505,1.68540968042698,0.61246251376468,0.737005903870608,0.826606249406124,7.12801714369232,7.66527480763526,0,0.718618141816238,0.841680569770331,0.625592599359821,2.21651292387346,4.82875382968922,7.04921930337745,5.55880817954408,1.36118619792025,6.63741652048789,5.33893472046419,2.96704661623387,3.30100205692843,4.84346887420663,5.66809188100384,3.7223371266318,3.20675031258406,5.06672426838233,6.56327813034698,3.68199594569197,2.7479829659198,6.39017266529906,5.84362169720314,3.22165125389926,0.773043412653187,0,1.43402297694502,0.243947412259191,0.265059536642971,0.464775771478074,0.621966330092223,0.252320850875628,0.72995471815166,4.69348596989448,9.00537313470039,1.38134921352481,7.42988684851167,5.0531563716871,4.96888560167344,2.19160097101532,4.82022059766964,4.30146493656336,3.4860711054785,2.60997681022206,1.75280700608214,3.13954344200554,2.30848294167834,0.738155454624648,0,2.057870056657,1.47008711385542,1.26755034821831,0,0,0,0.491953754172454,1.71567810298526,0.548751427043128,0,0.703702806881416,0.277765335475589,0.651616610620649,0,0,0.115930404975077,6.80970426567766,0.144366447761074,0,0,0,0,0,0,0,0,1.00789276919316,0.283550194484773,0.806026704325635,0.290633938513962,0.766765358330422,0.492663237895943,0,0.207328115540772,0,0,0.253991577168676,2.29193055334967,0,0,1.85089486865982,7.50857644609794,2.00078502841405,4.70950554250515,0.43596006883328,2.933531432838,2.84397774667111,0,0,2.6593811658487,8.32059495290929,0.771622122786426,1.41849132023278,0.532844358032199,2.57360388584666,1.08524321078289,0,0,4.26470338491055,0.791951872933429,1.20575750823834,0.871533458600294,2.99918973546171,0,0,0,3.59437283237374,4.59447743336456,0,3.90909528002464,1.64381058040307,1.96967059563885,0,0,0,0,4.57370323600434,2.60279707715243,0,0.502548796003046,0,0,0,0,1.34960640891054,1.00034104211935,0.542530047399471,10.1905722150095,6.60187258549499,10.7237642223076,6.44277782459923,0.601892199455438,0,1.03473071292505,1.99267679560631,2.58116835958384,1.99832313276591,0.195801157462741,0.686286847621712,0,0,0,1.21251028578504,0,1.81434175997808,5.95458738765064,8.74733247741956,10.3844234940237,7.81648810459776,7.67560873600055,9.00781958404202,5.93672265779964,0.616838775210622,1.77561725313127,0.98552587216571,1.03850885836724,0.929683027679674,0.966875596732978,0.601519410909855,0.0920809889358963,2.18147451512753,0.728364672026868,1.96686622439136,0.902399225814824,0.539107359730903,0,1.46139224653261,0.316654886678627,0,0,0.647747748306418,1.54227252690289,0,0,0.254876273045038,0.831076008928724,0.671624264166535,0,0,2.56450125116389,5.9042636225947,4.55529752530024,1.23649213977267,0.0915694648183434,0.165018999841176,0,0.650060246036521,1.6068392984416,1.45006077438183,0.770243085573222,1.5350367472613,2.20538515975249,0.751941714077915,1.59518363305651,1.78975917573812,3.47224939022276,0.165284915360978,0.960950336825531,0.510450849978337,0.4046311234222,1.85938219718914,3.46293581513704,1.3940745403212,1.54016790088044,0.532306030317022,0,0.74129687641568,2.14687330112987,7.07100901783368,3.48017367190598,7.24394736910534,0.255897791311334,0.42793898803392,0.318203247925937,0.78494864019923,4.31693898199955,4.66712950551293,2.47406044925942,1.01091240786658,0,0,1.46290121726877,1.46228093778771,0,2.59349831675173,2.96951407102797,1.13008116620243,2.2054613741845,1.99031692572366,1.75380354101505,1.73632660280006,0.655894752046633,0.405820753925408,1.239293992399,0.563391205064483,1.57752487424457,4.02821068153797,1.07001315444375,0.354761064070598,1.26664581178598,0.987884678879706,0.379473173765715,3.14941248220485,0,0,0,1.41215701165169,0.43050537267123,1.68471475667626,0,0.459446800413919,0,0,0,0,0,0,0,0,1.92283328029452,29.8368755131641,1.96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| ||
|short_description=p3@TEAD1 | |||
}} | }} |
Latest revision as of 15:30, 16 September 2015
Short description: | p3@TEAD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TEAD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -51bp_to_ENST00000527636_5end |
EntrezGene: | TEAD1 |
HGNC: | 11714 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.20e-12 | 76 |
muscle precursor cell | 3.68e-08 | 58 |
myoblast | 3.68e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.68e-08 | 58 |
skin fibroblast | 1.01e-07 | 23 |
muscle cell | 4.05e-07 | 55 |
electrically responsive cell | 4.86e-07 | 61 |
electrically active cell | 4.86e-07 | 61 |
fat cell | 9.26e-07 | 15 |
extraembryonic cell | 9.72e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 6.57e-09 | 73 |
somite | 9.68e-09 | 71 |
presomitic mesoderm | 9.68e-09 | 71 |
presumptive segmental plate | 9.68e-09 | 71 |
dermomyotome | 9.68e-09 | 71 |
trunk paraxial mesoderm | 9.68e-09 | 71 |
paraxial mesoderm | 1.89e-08 | 72 |
presumptive paraxial mesoderm | 1.89e-08 | 72 |
muscle tissue | 3.16e-08 | 64 |
musculature | 3.16e-08 | 64 |
musculature of body | 3.16e-08 | 64 |
skeletal muscle tissue | 3.47e-08 | 62 |
striated muscle tissue | 3.47e-08 | 62 |
myotome | 3.47e-08 | 62 |
multilaminar epithelium | 4.90e-08 | 83 |
epithelial vesicle | 2.23e-07 | 78 |
organ component layer | 2.37e-07 | 66 |
omentum | 3.18e-07 | 6 |
peritoneum | 3.18e-07 | 6 |
abdominal cavity | 3.18e-07 | 6 |
visceral peritoneum | 3.18e-07 | 6 |
integument | 7.08e-07 | 46 |
integumental system | 7.08e-07 | 46 |
extraembryonic membrane | 9.44e-07 | 14 |
membranous layer | 9.44e-07 | 14 |