FFCP PHASE1:Hg19::chrX:99665097..99665125,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57526 | |EntrezGene=57526 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14270 | |HGNC=14270 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TAB3,B3KU71,E9PAM6 | |UniProt=Q8TAB3,B3KU71,E9PAM6 | ||
|association_with_transcript=145bp_to_ENST00000255531,ENST00000373034,NM_001105243,NM_001184880,NM_020766,uc004efw.3,uc004efx.3,uc010nmz.2_5end | |association_with_transcript=145bp_to_ENST00000255531,ENST00000373034,NM_001105243,NM_001184880,NM_020766,uc004efw.3,uc004efx.3,uc010nmz.2_5end | ||
|cluster_id=chrX:99665097..99665125,- | |||
|coexpression_cluster_id=C1395 | |||
|description=CAGE_peak_2_at_PCDH19_5end | |description=CAGE_peak_2_at_PCDH19_5end | ||
|id=chrX:99665097..99665125,- | |id=chrX:99665097..99665125,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.87e-07;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.25e-13;1!DOID:4549;1.25e-13;1!DOID:5861;1.25e-13;1!DOID:6496;1.25e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.25e-13,1;DOID:4549,1.25e-13,1;DOID:5861,1.25e-13,1;DOID:6496,1.25e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0000956!2.90e-39!25;UBERON:0000203!2.90e-39!25;UBERON:0002619!2.96e-38!22;UBERON:0001893!4.14e-38!34;UBERON:0001869!4.80e-38!32;UBERON:0002791!9.27e-37!33;UBERON:0001950!4.32e-34!20;UBERON:0002020!7.50e-33!34;UBERON:0003528!7.50e-33!34;UBERON:0002780!1.40e-32!41;UBERON:0001890!1.40e-32!41;UBERON:0006240!1.40e-32!41;UBERON:0003080!1.29e-31!42;UBERON:0003056!3.47e-28!61;UBERON:0001049!2.77e-26!57;UBERON:0005068!2.77e-26!57;UBERON:0006241!2.77e-26!57;UBERON:0007135!2.77e-26!57;UBERON:0003075!1.92e-25!86;UBERON:0007284!1.92e-25!86;UBERON:0002346!8.12e-24!90;UBERON:0001017!9.03e-24!82;UBERON:0005743!1.18e-23!86;UBERON:0002616!2.47e-23!59;UBERON:0000073!8.27e-22!94;UBERON:0001016!8.27e-22!94;UBERON:0000955!7.10e-20!69;UBERON:0006238!7.10e-20!69;UBERON:0004121!1.02e-14!169;UBERON:0000033!1.08e-14!123;UBERON:0000924!4.30e-14!173;UBERON:0006601!4.30e-14!173;UBERON:0001871!1.34e-13!7;UBERON:0000153!1.58e-13!129;UBERON:0007811!1.58e-13!129;UBERON:0007023!3.24e-13!115;UBERON:0000200!8.68e-13!6;UBERON:0000349!1.28e-11!5;UBERON:0001872!3.53e-11!5;UBERON:0000483!1.05e-09!309;UBERON:0000119!1.82e-09!312;UBERON:0000025!8.93e-08!194;UBERON:0002771!9.46e-08!3;UBERON:0002021!2.56e-07!5;UBERON:0000064!3.50e-07!219;UBERON:0000475!5.99e-07!365 | |ontology_enrichment_uberon=UBERON:0000956!2.90e-39!25;UBERON:0000203!2.90e-39!25;UBERON:0002619!2.96e-38!22;UBERON:0001893!4.14e-38!34;UBERON:0001869!4.80e-38!32;UBERON:0002791!9.27e-37!33;UBERON:0001950!4.32e-34!20;UBERON:0002020!7.50e-33!34;UBERON:0003528!7.50e-33!34;UBERON:0002780!1.40e-32!41;UBERON:0001890!1.40e-32!41;UBERON:0006240!1.40e-32!41;UBERON:0003080!1.29e-31!42;UBERON:0003056!3.47e-28!61;UBERON:0001049!2.77e-26!57;UBERON:0005068!2.77e-26!57;UBERON:0006241!2.77e-26!57;UBERON:0007135!2.77e-26!57;UBERON:0003075!1.92e-25!86;UBERON:0007284!1.92e-25!86;UBERON:0002346!8.12e-24!90;UBERON:0001017!9.03e-24!82;UBERON:0005743!1.18e-23!86;UBERON:0002616!2.47e-23!59;UBERON:0000073!8.27e-22!94;UBERON:0001016!8.27e-22!94;UBERON:0000955!7.10e-20!69;UBERON:0006238!7.10e-20!69;UBERON:0004121!1.02e-14!169;UBERON:0000033!1.08e-14!123;UBERON:0000924!4.30e-14!173;UBERON:0006601!4.30e-14!173;UBERON:0001871!1.34e-13!7;UBERON:0000153!1.58e-13!129;UBERON:0007811!1.58e-13!129;UBERON:0007023!3.24e-13!115;UBERON:0000200!8.68e-13!6;UBERON:0000349!1.28e-11!5;UBERON:0001872!3.53e-11!5;UBERON:0000483!1.05e-09!309;UBERON:0000119!1.82e-09!312;UBERON:0000025!8.93e-08!194;UBERON:0002771!9.46e-08!3;UBERON:0002021!2.56e-07!5;UBERON:0000064!3.50e-07!219;UBERON:0000475!5.99e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.10e-26;22!UBERON:0001954;6.34e-26;2!UBERON:0003022;6.34e-26;2!UBERON:0002421;6.34e-26;2!UBERON:0002600;6.34e-26;2!UBERON:0000956;3.73e-23;25!UBERON:0000203;3.73e-23;25!UBERON:0002791;7.92e-22;32!UBERON:0001869;7.94e-22;32!UBERON:0003528;6.07e-18;34!UBERON:0002020;6.07e-18;34!UBERON:0001893;6.11e-17;34!UBERON:0002780;1.98e-15;41!UBERON:0001890;1.98e-15;41!UBERON:0001950;4.87e-15;20!UBERON:0007029;1.25e-13;1!UBERON:0003112;1.25e-13;1!UBERON:0011158;1.25e-13;1!UBERON:0003128;1.25e-13;1!UBERON:0001703;1.25e-13;1!UBERON:0002241;1.25e-13;1!UBERON:0002021;4.33e-11;5!UBERON:0000349;5.70e-11;5!UBERON:0000073;1.43e-08;53!UBERON:0002616;1.43e-08;53!UBERON:0001871;3.21e-08;6!UBERON:0000922;8.50e-08;49!UBERON:0002771;1.09e-07;2!UBERON:0001875;1.87e-07;2!UBERON:0006514;1.87e-07;2!UBERON:0001017;5.94e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,3.48e-26,22;UBERON:0001954,1.12e-25,2;UBERON:0003022,1.12e-25,2;UBERON:0002421,1.12e-25,2;UBERON:0002600,1.12e-25,2;UBERON:0002791,1.81e-23,32;UBERON:0001869,1.81e-23,32;UBERON:0000956,4.13e-23,25;UBERON:0000203,4.13e-23,25;UBERON:0003528,4.35e-22,34;UBERON:0002020,4.35e-22,34;UBERON:0001893,4.35e-22,34;UBERON:0002780,2.76e-18,41;UBERON:0001890,2.76e-18,41;UBERON:0003080,2.76e-18,41;UBERON:0006240,2.76e-18,41;UBERON:0001950,4.67e-15,20;UBERON:0000073,4.73e-14,53;UBERON:0002616,4.73e-14,53;UBERON:0007029,9.73e-14,1;UBERON:0003112,1.10e-13,1;UBERON:0011158,1.10e-13,1;UBERON:0003128,1.10e-13,1;UBERON:0001703,1.10e-13,1;UBERON:0002241,1.10e-13,1;UBERON:0004761,1.10e-13,1;UBERON:0009617,1.10e-13,1;UBERON:0001049,2.86e-13,56;UBERON:0005068,2.86e-13,56;UBERON:0006241,2.86e-13,56;UBERON:0007135,2.86e-13,56;UBERON:0003056,3.90e-12,61;UBERON:0001017,3.33e-11,81;UBERON:0002021,3.92e-11,5;UBERON:0000349,7.14e-11,5;UBERON:0000955,1.18e-10,68;UBERON:0006238,1.18e-10,68;UBERON:0001016,5.26e-10,89;UBERON:0003075,7.46e-09,82;UBERON:0007284,7.46e-09,82;UBERON:0010371,1.25e-08,104;UBERON:0002346,2.08e-08,86;UBERON:0001871,3.21e-08,6;UBERON:0002771,1.12e-07,2;UBERON:0005253,1.75e-07,2;UBERON:0001875,1.99e-07,2;UBERON:0006514,1.99e-07,2 | |||
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|short_description=p2@PCDH19 | |short_description=p2@PCDH19 | ||
}} | }} |
Latest revision as of 15:47, 16 September 2015
Short description: | p2@PCDH19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PCDH19_5end |
Coexpression cluster: | C1395_temporal_occipital_duodenum_parietal_medial_cerebellum_brain |
Association with transcript: | 145bp_to_ENST00000255531, ENST00000373034, NM_001105243, NM_001184880, NM_020766, uc004efw.3, uc004efx.3, uc010nmz.2_5end |
EntrezGene: | PCDH19 |
HGNC: | 14270 |
UniProt: | Q8TAB3B3KU71E9PAM6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.25e-13 | 1 |
extraosseous chondrosarcoma | 1.25e-13 | 1 |
myxoid chondrosarcoma | 1.25e-13 | 1 |
extraskeletal myxoid chondrosarcoma | 1.25e-13 | 1 |