FFCP PHASE1:Hg19::chr20:4702548..4702565,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23627 | |EntrezGene=23627 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15748 | |HGNC=15748 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UKY0 | |UniProt=Q9UKY0 | ||
|association_with_transcript=0bp_to_ENST00000305817,NM_012409,uc002wkz.2_5end | |association_with_transcript=0bp_to_ENST00000305817,NM_012409,uc002wkz.2_5end | ||
|cluster_id=chr20:4702548..4702565,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_1_at_PRND_5end | |description=CAGE_peak_1_at_PRND_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002139!5.15e-20!24;CL:0000115!6.37e-19!35;CL:0000071!3.29e-15!18;CL:0002546!3.29e-15!18;CL:0002078!1.23e-13!44;CL:1000413!7.79e-12!9;CL:0000213!4.82e-10!57;CL:0000215!4.82e-10!57;CL:0002544!4.47e-07!6 | |ontology_enrichment_celltype=CL:0002139!5.15e-20!24;CL:0000115!6.37e-19!35;CL:0000071!3.29e-15!18;CL:0002546!3.29e-15!18;CL:0002078!1.23e-13!44;CL:1000413!7.79e-12!9;CL:0000213!4.82e-10!57;CL:0000215!4.82e-10!57;CL:0002544!4.47e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000115;7.92e-09;36!CL:1000413;7.44e-08;9!CL:0000071;7.50e-08;18!CL:0002139;1.02e-07;24 | |ontology_enrichment_celltype_v019=CL:0000115;7.92e-09;36!CL:1000413;7.44e-08;9!CL:0000071;7.50e-08;18!CL:0002139;1.02e-07;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.62e-09,36;CL:1000413,7.51e-08,9;CL:0000071,7.55e-08,18;CL:0002546,7.55e-08,18;CL:0002139,1.02e-07,24;CL:0002078,3.02e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002546;7.50e-08;18 | |ontology_enrichment_development_v019=CL:0002546;7.50e-08;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!3.29e-15!18;UBERON:0004638!3.29e-15!18;UBERON:0004852!3.29e-15!18;UBERON:0003915!7.79e-12!9;UBERON:0004700!7.79e-12!9;UBERON:0001917!7.79e-12!9;UBERON:0000487!9.92e-12!22;UBERON:0006914!7.20e-10!25;UBERON:0007023!9.97e-10!115;UBERON:0004111!6.12e-08!241;UBERON:0000055!7.55e-08!69;UBERON:0004872!2.24e-07!84;UBERON:0000468!5.08e-07!659;UBERON:0000025!8.56e-07!194 | |ontology_enrichment_uberon=UBERON:0001986!3.29e-15!18;UBERON:0004638!3.29e-15!18;UBERON:0004852!3.29e-15!18;UBERON:0003915!7.79e-12!9;UBERON:0004700!7.79e-12!9;UBERON:0001917!7.79e-12!9;UBERON:0000487!9.92e-12!22;UBERON:0006914!7.20e-10!25;UBERON:0007023!9.97e-10!115;UBERON:0004111!6.12e-08!241;UBERON:0000055!7.55e-08!69;UBERON:0004872!2.24e-07!84;UBERON:0000468!5.08e-07!659;UBERON:0000025!8.56e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;2.80e-18;49!UBERON:0002050;4.98e-14;5!UBERON:0005423;4.98e-14;5!UBERON:0001896;6.42e-13;3!UBERON:0005290;6.42e-13;3!UBERON:0002346;2.26e-10;4!UBERON:0000923;2.26e-10;4!UBERON:0010316;2.26e-10;4!UBERON:0005291;2.26e-10;4!UBERON:0002108;6.95e-08;4!UBERON:0003915;7.44e-08;9!UBERON:0004700;7.44e-08;9!UBERON:0001917;7.44e-08;9!UBERON:0004638;7.50e-08;18!UBERON:0001986;7.50e-08;18!UBERON:0004852;7.50e-08;18 | |ontology_enrichment_uberon_v019=UBERON:0000922;2.80e-18;49!UBERON:0002050;4.98e-14;5!UBERON:0005423;4.98e-14;5!UBERON:0001896;6.42e-13;3!UBERON:0005290;6.42e-13;3!UBERON:0002346;2.26e-10;4!UBERON:0000923;2.26e-10;4!UBERON:0010316;2.26e-10;4!UBERON:0005291;2.26e-10;4!UBERON:0002108;6.95e-08;4!UBERON:0003915;7.44e-08;9!UBERON:0004700;7.44e-08;9!UBERON:0001917;7.44e-08;9!UBERON:0004638;7.50e-08;18!UBERON:0001986;7.50e-08;18!UBERON:0004852;7.50e-08;18 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,5.34e-13,3;UBERON:0005290,5.34e-13,3;UBERON:0010096,5.34e-13,3;UBERON:0002108,7.30e-08,4;UBERON:0003915,7.51e-08,9;UBERON:0004700,7.51e-08,9;UBERON:0001917,7.51e-08,9;UBERON:0004638,7.55e-08,18;UBERON:0001986,7.55e-08,18;UBERON:0004852,7.55e-08,18 | |||
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| ||
|short_description=p1@PRND | |short_description=p1@PRND | ||
}} | }} |
Latest revision as of 17:24, 16 September 2015
Short description: | p1@PRND |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRND_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000305817, NM_012409, uc002wkz.2_5end |
EntrezGene: | PRND |
HGNC: | 15748 |
UniProt: | Q9UKY0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.62e-09 | 36 |
endothelial cell of artery | 7.51e-08 | 9 |
blood vessel endothelial cell | 7.55e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.55e-08 | 18 |
endothelial cell of vascular tree | 1.02e-07 | 24 |
meso-epithelial cell | 3.02e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 5.34e-13 | 3 |
myelencephalon | 5.34e-13 | 3 |
future myelencephalon | 5.34e-13 | 3 |
small intestine | 7.30e-08 | 4 |
endothelial tube | 7.51e-08 | 9 |
arterial system endothelium | 7.51e-08 | 9 |
endothelium of artery | 7.51e-08 | 9 |
blood vessel endothelium | 7.55e-08 | 18 |
endothelium | 7.55e-08 | 18 |
cardiovascular system endothelium | 7.55e-08 | 18 |