FFCP PHASE2:Hg19::chr6:16238880..16238915,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:2766 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:4376 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=2766 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=4376 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P36959 | ||
|association_with_transcript=69bp_to_ENST00000259727,NM_006877,uc003nbs.2_5end | |association_with_transcript=69bp_to_ENST00000259727,NM_006877,uc003nbs.2_5end | ||
|cluster_id=chr6:16238880..16238915,+ | |cluster_id=chr6:16238880..16238915,+ | ||
Latest revision as of 17:33, 16 September 2015
| Short description: | p2@GMPR |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_GMPR_5end |
| Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
| Association with transcript: | 69bp_to_ENST00000259727, NM_006877, uc003nbs.2_5end |
| EntrezGene: | GMPR |
| HGNC: | 4376 |
| UniProt: | P36959 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@GMPR |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| endothelial cell of vascular tree | 2.39e-13 | 24 |
| endothelial cell | 7.03e-12 | 36 |
| mesodermal cell | 5.79e-10 | 121 |
| blood vessel endothelial cell | 1.36e-09 | 18 |
| embryonic blood vessel endothelial progenitor cell | 1.36e-09 | 18 |
| meso-epithelial cell | 4.04e-08 | 45 |
| lining cell | 3.60e-07 | 58 |
| barrier cell | 3.60e-07 | 58 |
Showing 1 to 8 of 8 entries
| Ontology term | p-value | n |
|---|---|---|
| vessel | 8.94e-19 | 68 |
| adult organism | 3.52e-18 | 114 |
| circulatory system | 3.95e-18 | 112 |
| anatomical conduit | 5.08e-17 | 240 |
| cardiovascular system | 1.64e-16 | 109 |
| splanchnic layer of lateral plate mesoderm | 2.49e-16 | 83 |
| epithelial tube open at both ends | 4.30e-16 | 59 |
| blood vessel | 4.30e-16 | 59 |
| blood vasculature | 4.30e-16 | 59 |
| vascular cord | 4.30e-16 | 59 |
Showing 1 to 10 of 36 entries
