FFCP PHASE1:Hg19::chr2:27886747..27886783,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22950 | |EntrezGene=22950 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13813 | |HGNC=13813 | ||
|TSSclassifier=strong | |||
|UniProt=B4DV74 | |UniProt=B4DV74 | ||
|association_with_transcript=0bp_to_AK300958_5end | |association_with_transcript=0bp_to_AK300958_5end | ||
|cluster_id=chr2:27886747..27886783,+ | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_1_at_SLC4A1AP_5end | |description=CAGE_peak_1_at_SLC4A1AP_5end | ||
|id=chr2:27886747..27886783,+ | |id=chr2:27886747..27886783,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!6.08e-07!143;DOID:305!8.73e-07!106 | |ontology_enrichment_disease=DOID:0050687!6.08e-07!143;DOID:305!8.73e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,6.08e-07,143;DOID:305,8.73e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0002780!1.46e-17!41;UBERON:0001890!1.46e-17!41;UBERON:0006240!1.46e-17!41;UBERON:0003080!5.53e-17!42;UBERON:0001049!2.28e-16!57;UBERON:0005068!2.28e-16!57;UBERON:0006241!2.28e-16!57;UBERON:0007135!2.28e-16!57;UBERON:0000955!5.43e-15!69;UBERON:0006238!5.43e-15!69;UBERON:0001893!8.40e-15!34;UBERON:0002020!1.92e-14!34;UBERON:0003528!1.92e-14!34;UBERON:0001869!3.33e-14!32;UBERON:0002791!3.58e-14!33;UBERON:0002616!4.87e-14!59;UBERON:0001017!1.23e-13!82;UBERON:0000073!4.88e-13!94;UBERON:0001016!4.88e-13!94;UBERON:0007023!7.96e-13!115;UBERON:0005743!3.20e-12!86;UBERON:0000956!1.58e-10!25;UBERON:0000203!1.58e-10!25;UBERON:0002619!4.02e-10!22;UBERON:0001950!2.24e-09!20;UBERON:0000153!3.36e-08!129;UBERON:0007811!3.36e-08!129;UBERON:0003075!4.86e-08!86;UBERON:0007284!4.86e-08!86;UBERON:0003056!1.52e-07!61;UBERON:0000033!1.61e-07!123;UBERON:0002346!4.03e-07!90;UBERON:0004121!6.40e-07!169 | |ontology_enrichment_uberon=UBERON:0002780!1.46e-17!41;UBERON:0001890!1.46e-17!41;UBERON:0006240!1.46e-17!41;UBERON:0003080!5.53e-17!42;UBERON:0001049!2.28e-16!57;UBERON:0005068!2.28e-16!57;UBERON:0006241!2.28e-16!57;UBERON:0007135!2.28e-16!57;UBERON:0000955!5.43e-15!69;UBERON:0006238!5.43e-15!69;UBERON:0001893!8.40e-15!34;UBERON:0002020!1.92e-14!34;UBERON:0003528!1.92e-14!34;UBERON:0001869!3.33e-14!32;UBERON:0002791!3.58e-14!33;UBERON:0002616!4.87e-14!59;UBERON:0001017!1.23e-13!82;UBERON:0000073!4.88e-13!94;UBERON:0001016!4.88e-13!94;UBERON:0007023!7.96e-13!115;UBERON:0005743!3.20e-12!86;UBERON:0000956!1.58e-10!25;UBERON:0000203!1.58e-10!25;UBERON:0002619!4.02e-10!22;UBERON:0001950!2.24e-09!20;UBERON:0000153!3.36e-08!129;UBERON:0007811!3.36e-08!129;UBERON:0003075!4.86e-08!86;UBERON:0007284!4.86e-08!86;UBERON:0003056!1.52e-07!61;UBERON:0000033!1.61e-07!123;UBERON:0002346!4.03e-07!90;UBERON:0004121!6.40e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.86e-13;34!UBERON:0001869;6.62e-13;32!UBERON:0002791;1.40e-12;32!UBERON:0002780;1.42e-12;41!UBERON:0001890;1.42e-12;41!UBERON:0003528;1.77e-12;34!UBERON:0002020;1.77e-12;34!UBERON:0000956;1.55e-10;25!UBERON:0000203;1.55e-10;25!UBERON:0000073;1.86e-10;53!UBERON:0002616;1.86e-10;53!UBERON:0002619;3.94e-10;22!UBERON:0001950;2.32e-09;20!UBERON:0001017;8.18e-08;75!UBERON:0000955;2.04e-07;68!UBERON:0001016;7.02e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,1.46e-17,41;UBERON:0001890,1.46e-17,41;UBERON:0003080,1.46e-17,41;UBERON:0006240,1.46e-17,41;UBERON:0000073,4.09e-17,53;UBERON:0002616,4.09e-17,53;UBERON:0001049,8.35e-17,56;UBERON:0005068,8.35e-17,56;UBERON:0006241,8.35e-17,56;UBERON:0007135,8.35e-17,56;UBERON:0000955,2.46e-15,68;UBERON:0006238,2.46e-15,68;UBERON:0001893,8.40e-15,34;UBERON:0001016,1.08e-14,89;UBERON:0003528,1.92e-14,34;UBERON:0002020,1.92e-14,34;UBERON:0001869,3.33e-14,32;UBERON:0001017,6.49e-14,81;UBERON:0002791,8.85e-14,32;UBERON:0007023,2.09e-12,114;UBERON:0000956,1.58e-10,25;UBERON:0000203,1.58e-10,25;UBERON:0002619,4.02e-10,22;UBERON:0001950,2.24e-09,20;UBERON:0011216,1.03e-08,223;UBERON:0003056,1.80e-07,61;UBERON:0003075,2.93e-07,82;UBERON:0007284,2.93e-07,82 | |||
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| ||
|short_description=p1@SLC4A1AP | |short_description=p1@SLC4A1AP | ||
}} | }} |
Latest revision as of 18:13, 16 September 2015
Short description: | p1@SLC4A1AP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC4A1AP_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | 0bp_to_AK300958_5end |
EntrezGene: | SLC4A1AP |
HGNC: | 13813 |
UniProt: | B4DV74 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 1.46e-17 | 41 |
forebrain | 1.46e-17 | 41 |
anterior neural tube | 1.46e-17 | 41 |
future forebrain | 1.46e-17 | 41 |
regional part of nervous system | 4.09e-17 | 53 |
regional part of brain | 4.09e-17 | 53 |
neural tube | 8.35e-17 | 56 |
neural rod | 8.35e-17 | 56 |
future spinal cord | 8.35e-17 | 56 |
neural keel | 8.35e-17 | 56 |
brain | 2.46e-15 | 68 |
future brain | 2.46e-15 | 68 |
telencephalon | 8.40e-15 | 34 |
nervous system | 1.08e-14 | 89 |
brain grey matter | 1.92e-14 | 34 |
gray matter | 1.92e-14 | 34 |
cerebral hemisphere | 3.33e-14 | 32 |
central nervous system | 6.49e-14 | 81 |
regional part of telencephalon | 8.85e-14 | 32 |
adult organism | 2.09e-12 | 114 |
cerebral cortex | 1.58e-10 | 25 |
pallium | 1.58e-10 | 25 |
regional part of cerebral cortex | 4.02e-10 | 22 |
neocortex | 2.24e-09 | 20 |
organ system subdivision | 1.03e-08 | 223 |
pre-chordal neural plate | 1.80e-07 | 61 |
neural plate | 2.93e-07 | 82 |
presumptive neural plate | 2.93e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 6.08e-07 | 143 |
carcinoma | 8.73e-07 | 106 |