FFCP PHASE1:Hg19::chr10:121652124..121652136,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11196 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17018 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y6Y8 | |||
|association_with_transcript=39bp_to_NM_007190,NR_037771_5end | |||
|cluster_id=chr10:121652124..121652136,+ | |||
|description=CAGE_peak_4_at_SEC23IP_5end | |||
|id=chr10:121652124..121652136,+ | |||
|ontology_enrichment_celltype=CL:0000542!8.66e-18!53;CL:0000051!8.66e-18!53;CL:0000037!1.26e-17!172;CL:0000566!1.26e-17!172;CL:0000838!1.94e-17!52;CL:0000988!2.05e-15!182;CL:0002032!3.69e-15!165;CL:0000837!3.69e-15!165;CL:0002087!5.79e-11!119;CL:0000738!1.03e-10!140;CL:0002031!2.78e-10!124;CL:0000791!4.19e-10!18;CL:0000789!4.19e-10!18;CL:0002420!4.19e-10!18;CL:0002419!4.19e-10!18;CL:0000790!4.19e-10!18;CL:0000084!7.35e-10!25;CL:0000827!7.35e-10!25;CL:0000236!1.06e-08!14;CL:0000945!5.05e-08!24;CL:0000826!5.05e-08!24;CL:0000625!7.76e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.81e-20;18!CL:0000789;3.81e-20;18!CL:0002419;3.81e-20;18!CL:0000084;4.67e-20;25!CL:0000542;1.68e-18;53!CL:0000236;9.67e-18;13!CL:0000625;2.83e-17;11!CL:0000945;2.34e-11;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.34e-28,52;CL:0000542,1.44e-27,53;CL:0000051,1.44e-27,53;CL:0000791,2.28e-20,18;CL:0000789,2.28e-20,18;CL:0002420,2.28e-20,18;CL:0002419,2.28e-20,18;CL:0000790,2.28e-20,18;CL:0000084,4.18e-20,25;CL:0000827,4.18e-20,25;CL:0000625,1.79e-17,11;CL:0000236,7.35e-17,14;CL:0000037,5.95e-16,168;CL:0000988,9.30e-15,177;CL:0002032,2.82e-13,161;CL:0000837,2.82e-13,161;CL:0000945,9.19e-12,24;CL:0000826,9.19e-12,24;CL:0000738,1.62e-10,136;CL:0002087,8.41e-10,115;CL:0002031,3.39e-09,120 | |||
|ontology_enrichment_development_v019=CL:0000790;3.81e-20;18!CL:0000051;1.68e-18;53 | |||
|ontology_enrichment_disease=DOID:2531!2.96e-12!51;DOID:0060083!2.96e-12!51;DOID:1240!1.18e-11!39;DOID:8692!1.05e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.21e-08;39!DOID:2531;2.00e-07;51!DOID:0060083;2.00e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.27e-10,51;DOID:0060083,5.27e-10,51;DOID:1240,9.98e-10,39;DOID:8692,8.18e-07,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.78e-09;2!UBERON:0005058;1.78e-09;2!UBERON:0009113;1.78e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.25e-10,4;UBERON:0005058,5.25e-10,4;UBERON:0009113,5.25e-10,4;UBERON:0003295,5.25e-10,4;UBERON:0005562,5.25e-10,4;UBERON:0003351,8.70e-07,6 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0.204000691244253,0.313454721478088,0,0,0,0.229240217243854,0.246301768349837,0,0,0.383829398097213,0.154816123316076,0,0,0,0.697204805222715,0.426507697462265,0.880801318004542,0,0,0.217010870715852,0.223915474239924,0.971680998056939,0.515151135268373,0.290796477559129,0,0.242584061187816,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0.659702600373432,0,0,0,0.56738522469114,0,0,0,0.217188844705117,0,0,0.316462387440884,0.211255286311942,0.212604299965044,0.209658645508376,0,0.150176892841506,0,0.285012743741249,0.19891667719909,0.182664153764634,0,1.63841583378639,0.889509253863555,2.56038133539904,1.60158394814405,2.29900975981793,1.98313461835459,0.954053754535364,1.1384259382189,1.76171156811282,0.382273228125229,1.32171328579026,0.560508562981536,0.526768169550154,0.983548850569165,0.393010762749165,1.02800749499755,1.67186495390678,1.62961133316795,0,0,0.779873198196215,0.294605907474837,0.443067789167242,0.812411591295047,0.384273959177026,0.780356085359269,0.822189523018381,0.276350017785848,0.579606171470105,1.63115219478266,0.802622484269139,1.04535523804977,1.24640276967323,1.91610246800961,0.68725489096526,1.26509846009751,2.86708872891687,3.25541726928209,0.950452044448374,2.10805166708882,2.04778577847069,4.99722906209383,1.65744076430812,1.64225599384209,0.201606743224732,0,0.868946423296794,0,0,0.639312809217652,0,0.50133791063589,0,0.795285947051099,0,0.283604451492204,0,0.087834785693126,0.261958150995425,0,0.370784442784429,0,0.174129737299267,0.26591592103773,0.715471872916026,1.14398982156026,1.11437250398869,0,0,0,0.56530794192401,0,0,0,0,1.06729878806013,0.66944122552934,0,0,0,0.367663080345869,0,0.714397826272638,0.673588117878509,0.337834441449967,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0.132409180813219,0.573673241497627,0,0,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0.570471821544449,0.149448680551801,0.352303495931295,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.226864366320042,0.358779271377724,0,0,0,0.103052529238439,0,0,0.337552664482532,0.194874010322397,0,0.0920498986422993,0.161646056818812,0.710019185033229,0.201504196455281,0,0.193260853163297,0,0,0.243947412259191,0.265059536642971,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0.721879481669586,0,0,0.241011029883482,0,0.435758888184812,0,0,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,2.20731549707325,0.245976877086227,0.171567810298526,0,1.1240175325762,0.100528972411631,0.185176890317059,0,0,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0,0.858486162094873,0.738651018262192,0,0.594524649154913,0,0,0.141775097242386,0,0.581267877027924,0,0,0.088048434013226,0.207328115540772,0.288239906833923,0.25248486685276,0.126995788584338,0,0,0,0,0.300343057843917,0,0.336393253036082,0.43596006883328,0.2933531432838,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0,0.205476322550383,0.179060963239896,0.224170287987055,0.197030760201927,0.646882724578552,0.385029108839245,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0,0,0.206768026122887,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0.348631135379878,0.362578348774867,0,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,1.54227252690289,0,0,0.254876273045038,0,0,0.877039506583738,0,0,0.328014645699706,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0.214840489736547,0,0.170453254832202,0.0890320356467374,0,0.192190067365106,0.255225424989168,0,0,0.31481234683064,0,0,0.532306030317022,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,1.05650146756755,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.430234056612155,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,3.04468565539302,0,0,0.476463550915578,0.822724546172388,0.648473311192717,0,0,0.213648142254946,0,0,0.371606350251437,1.73123055571734,0.640276590135727,1.4348364545594,0.399158742865633,2.10655907145603,0.635020748171649,0.973865820823666,1.68478306868075,1.59764275323235,1.41011906195721,2.50634477090067,1.52362600021443,0.802940375518498,0.605399121573143,0.425846237690326,0,0.307240764308458,0.447352215784832,0.333698283423817,0.976940477010201,0.278406173895242,1.23087398947712,0,0.66614393599564,2.81974010175699,0.18714054040822,0.439524537815682,0,0.111443384277478,0,0,0,0.307160702099232,0,0.140669416410513,0,0,0,0.398495976502139,0.828851746593443,0,0.102268682502155,0,0,0.179736702294654,0,0.511572370226872,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0.455173793141999,0,0,0,0.291604613383254,0,0.885741385813839,0.482385754501632,0,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| |||
|short_description=p4@SEC23IP | |||
}} |
Latest revision as of 18:24, 16 September 2015
Short description: | p4@SEC23IP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SEC23IP_5end |
Coexpression cluster: | NA |
Association with transcript: | 39bp_to_NM_007190, NR_037771_5end |
EntrezGene: | SEC23IP |
HGNC: | 17018 |
UniProt: | Q9Y6Y8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.34e-28 | 52 |
lymphocyte | 1.44e-27 | 53 |
common lymphoid progenitor | 1.44e-27 | 53 |
mature alpha-beta T cell | 2.28e-20 | 18 |
alpha-beta T cell | 2.28e-20 | 18 |
immature T cell | 2.28e-20 | 18 |
mature T cell | 2.28e-20 | 18 |
immature alpha-beta T cell | 2.28e-20 | 18 |
T cell | 4.18e-20 | 25 |
pro-T cell | 4.18e-20 | 25 |
CD8-positive, alpha-beta T cell | 1.79e-17 | 11 |
B cell | 7.35e-17 | 14 |
hematopoietic stem cell | 5.95e-16 | 168 |
hematopoietic cell | 9.30e-15 | 177 |
hematopoietic oligopotent progenitor cell | 2.82e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.82e-13 | 161 |
lymphocyte of B lineage | 9.19e-12 | 24 |
pro-B cell | 9.19e-12 | 24 |
leukocyte | 1.62e-10 | 136 |
nongranular leukocyte | 8.41e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 3.39e-09 | 120 |
Ontology term | p-value | n |
---|---|---|
thymus | 5.25e-10 | 4 |
hemolymphoid system gland | 5.25e-10 | 4 |
thymic region | 5.25e-10 | 4 |
pharyngeal gland | 5.25e-10 | 4 |
thymus primordium | 5.25e-10 | 4 |
pharyngeal epithelium | 8.70e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.27e-10 | 51 |
immune system cancer | 5.27e-10 | 51 |
leukemia | 9.98e-10 | 39 |
myeloid leukemia | 8.18e-07 | 31 |