FFCP PHASE1:Hg19::chr1:145575227..145575319,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:145575227..145575319,+
|short_description=p1@PIAS3
|description=CAGE_peak_1_at_PIAS3_5end
|association_with_transcript=0bp_to_ENST00000369299,ENST000003930...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10401 | |EntrezGene=10401 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16861 | |HGNC=16861 | ||
|TSSclassifier=strong | |||
|UniProt=F8WA94,E7ESB4 | |UniProt=F8WA94,E7ESB4 | ||
|association_with_transcript=0bp_to_ENST00000369299,ENST00000393046,uc010oyy.1_5end | |||
|cluster_id=chr1:145575227..145575319,+ | |||
|description=CAGE_peak_1_at_PIAS3_5end | |||
|id=chr1:145575227..145575319,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.66e-27!180;CL:0000057!1.49e-14!75;CL:0000183!1.18e-13!59;CL:0000680!9.45e-13!57;CL:0000056!9.45e-13!57;CL:0000355!9.45e-13!57;CL:0000187!6.51e-12!54;CL:0000222!1.67e-11!119;CL:0000220!2.50e-10!246;CL:0002321!3.26e-10!248;CL:0000393!2.03e-09!60;CL:0000211!2.03e-09!60;CL:0000192!1.09e-08!42;CL:0000514!1.09e-08!42;CL:0002620!5.06e-08!23;CL:0000359!7.50e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.68e-08;23!CL:0000187;1.34e-07;55!CL:0000192;7.89e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.44e-15,76;CL:0000680,4.94e-13,58;CL:0000056,4.94e-13,58;CL:0000355,4.94e-13,58;CL:0000187,3.42e-12,55;CL:0000222,7.51e-12,121;CL:0002321,1.62e-10,250;CL:0000393,1.12e-09,61;CL:0000211,1.12e-09,61;CL:0000192,5.85e-09,43;CL:0000514,5.85e-09,43;CL:0002620,5.06e-08,23;CL:0000359,7.50e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000355;6.80e-08;58!CL:0000514;7.89e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!7.27e-24!365;UBERON:0000468!2.60e-20!659;UBERON:0002100!4.31e-20!216;UBERON:0000914!2.53e-17!83;UBERON:0002329!2.53e-17!83;UBERON:0003077!2.53e-17!83;UBERON:0003059!2.53e-17!83;UBERON:0007282!2.53e-17!83;UBERON:0009618!2.53e-17!83;UBERON:0007285!2.53e-17!83;UBERON:0005256!1.01e-16!143;UBERON:0000486!1.68e-16!82;UBERON:0004290!1.03e-15!70;UBERON:0003104!1.34e-15!238;UBERON:0009142!1.34e-15!238;UBERON:0000480!2.13e-15!626;UBERON:0000467!4.39e-15!625;UBERON:0000119!5.13e-14!312;UBERON:0000483!4.43e-13!309;UBERON:0003102!5.25e-13!95;UBERON:0002049!1.24e-12!79;UBERON:0007798!1.24e-12!79;UBERON:0001134!1.31e-12!61;UBERON:0002036!1.31e-12!61;UBERON:0003082!1.31e-12!61;UBERON:0002385!3.99e-12!63;UBERON:0001015!3.99e-12!63;UBERON:0000383!3.99e-12!63;UBERON:0000481!4.12e-12!347;UBERON:0002050!3.87e-11!605;UBERON:0005423!3.87e-11!605;UBERON:0000922!4.00e-11!612;UBERON:0000923!7.58e-11!604;UBERON:0005291!7.58e-11!604;UBERON:0006598!7.58e-11!604;UBERON:0002532!7.58e-11!604;UBERON:0004872!1.37e-10!84;UBERON:0000490!2.85e-10!138;UBERON:0000055!4.61e-10!69;UBERON:0003914!4.96e-10!118;UBERON:0002199!4.99e-10!45;UBERON:0002416!4.99e-10!45;UBERON:0000926!1.22e-09!448;UBERON:0004120!1.22e-09!448;UBERON:0006603!1.22e-09!448;UBERON:0001981!2.08e-09!60;UBERON:0007500!2.08e-09!60;UBERON:0004537!2.08e-09!60;UBERON:0006965!2.08e-09!60;UBERON:0002097!8.00e-09!40;UBERON:0009569!4.10e-08!113;UBERON:0004535!5.95e-08!110;UBERON:0001009!9.41e-08!113;UBERON:0001637!1.96e-07!42;UBERON:0003509!1.96e-07!42;UBERON:0004572!1.96e-07!42;UBERON:0000915!5.86e-07!52 | |||
|ontology_enrichment_uberon_v019=UBERON:0003102;2.69e-07;50!UBERON:0002097;3.04e-07;41!UBERON:0002199;4.91e-07;46!UBERON:0002416;4.91e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,4.80e-18,199;UBERON:0007503,1.20e-17,78;UBERON:0000486,8.60e-17,83;UBERON:0003104,2.02e-16,160;UBERON:0009142,2.02e-16,160;UBERON:0002329,5.30e-16,71;UBERON:0003059,5.30e-16,71;UBERON:0007282,5.30e-16,71;UBERON:0004290,5.30e-16,71;UBERON:0009618,5.30e-16,71;UBERON:0007524,1.48e-15,73;UBERON:0003077,1.50e-15,72;UBERON:0007285,1.50e-15,72;UBERON:0005256,5.30e-15,122;UBERON:0000119,1.18e-13,309;UBERON:0003102,1.70e-13,99;UBERON:0000490,5.64e-13,148;UBERON:0001134,6.90e-13,62;UBERON:0002036,6.90e-13,62;UBERON:0003082,6.90e-13,62;UBERON:0000483,9.94e-13,306;UBERON:0002385,2.11e-12,64;UBERON:0001015,2.11e-12,64;UBERON:0000383,2.11e-12,64;UBERON:0002049,2.73e-12,78;UBERON:0007798,2.73e-12,78;UBERON:0002199,2.34e-10,46;UBERON:0002416,2.34e-10,46;UBERON:0004872,2.84e-10,83;UBERON:0003914,8.41e-10,117;UBERON:0000055,9.73e-10,68;UBERON:0002097,3.79e-09,41;UBERON:0007500,4.43e-09,59;UBERON:0001981,4.43e-09,59;UBERON:0004537,4.43e-09,59;UBERON:0006965,4.43e-09,59;UBERON:0000922,6.32e-09,592;UBERON:0005423,1.52e-08,581;UBERON:0009569,7.17e-08,112;UBERON:0002050,7.80e-08,564;UBERON:0004535,1.07e-07,109;UBERON:0001009,1.67e-07,112;UBERON:0001637,1.96e-07,42;UBERON:0003509,1.96e-07,42;UBERON:0004572,1.96e-07,42;UBERON:0000923,2.33e-07,560;UBERON:0010316,2.33e-07,560;UBERON:0005291,2.33e-07,560;UBERON:0006598,2.33e-07,560;UBERON:0010317,2.33e-07,560;UBERON:0002532,2.33e-07,560;UBERON:0000915,6.43e-07,52 | |||
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| ||
|short_description=p1@PIAS3 | |||
}} | }} |
Latest revision as of 18:38, 16 September 2015
Short description: | p1@PIAS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PIAS3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000369299, ENST00000393046, uc010oyy.1_5end |
EntrezGene: | PIAS3 |
HGNC: | 16861 |
UniProt: | F8WA94E7ESB4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.44e-15 | 76 |
muscle precursor cell | 4.94e-13 | 58 |
myoblast | 4.94e-13 | 58 |
multi-potent skeletal muscle stem cell | 4.94e-13 | 58 |
muscle cell | 3.42e-12 | 55 |
mesodermal cell | 7.51e-12 | 121 |
embryonic cell | 1.62e-10 | 250 |
electrically responsive cell | 1.12e-09 | 61 |
electrically active cell | 1.12e-09 | 61 |
smooth muscle cell | 5.85e-09 | 43 |
smooth muscle myoblast | 5.85e-09 | 43 |
skin fibroblast | 5.06e-08 | 23 |
vascular associated smooth muscle cell | 7.50e-07 | 32 |