FFCP PHASE1:Hg19::chr1:242612809..242612816,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=200150 | |EntrezGene=200150 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=26879 | |HGNC=26879 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q8N7P1 | |UniProt=Q8N7P1 | ||
|association_with_transcript=-25bp_to_ENST00000427495,NM_001195811,NM_001195812_5end | |association_with_transcript=-25bp_to_ENST00000427495,NM_001195811,NM_001195812_5end | ||
|cluster_id=chr1:242612809..242612816,- | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_10_at_PLD5_5end | |description=CAGE_peak_10_at_PLD5_5end | ||
Latest revision as of 18:54, 16 September 2015
| Short description: | p10@PLD5 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_10_at_PLD5_5end |
| Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
| Association with transcript: | -25bp_to_ENST00000427495, NM_001195811, NM_001195812_5end |
| EntrezGene: | PLD5 |
| HGNC: | 26879 |
| UniProt: | Q8N7P1 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p10@PLD5 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| cerebellum | 9.76e-45 | 6 |
| rhombic lip | 9.76e-45 | 6 |
| regional part of metencephalon | 2.66e-30 | 9 |
| metencephalon | 2.66e-30 | 9 |
| future metencephalon | 2.66e-30 | 9 |
| segmental subdivision of hindbrain | 4.59e-23 | 12 |
| hindbrain | 4.59e-23 | 12 |
| presumptive hindbrain | 4.59e-23 | 12 |
| segmental subdivision of nervous system | 2.16e-21 | 13 |
| posterior neural tube | 1.04e-18 | 15 |
Showing 1 to 10 of 17 entries
