FFCP PHASE1:Hg19::chr4:175204851..175204863,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80817 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29356 | |||
|TSSclassifier=strong | |||
|UniProt=D6RBX1 | |||
|association_with_transcript=-17bp_to_ENST00000505124_5end | |||
|cluster_id=chr4:175204851..175204863,+ | |||
|description=CAGE_peak_7_at_CEP44_5end | |||
|id=chr4:175204851..175204863,+ | |||
|ontology_enrichment_celltype=CL:0000542!3.23e-14!53;CL:0000051!3.23e-14!53;CL:0000838!7.04e-14!52;CL:0000791!1.14e-10!18;CL:0000789!1.14e-10!18;CL:0002420!1.14e-10!18;CL:0002419!1.14e-10!18;CL:0000790!1.14e-10!18;CL:0002087!4.34e-10!119;CL:0000037!6.79e-10!172;CL:0000566!6.79e-10!172;CL:0000738!9.34e-10!140;CL:0000084!1.07e-09!25;CL:0000827!1.07e-09!25;CL:0002031!6.77e-09!124;CL:0000988!7.87e-09!182;CL:0002032!1.78e-08!165;CL:0000837!1.78e-08!165 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.27e-18;18!CL:0000789;1.27e-18;18!CL:0002419;1.27e-18;18!CL:0000084;1.47e-14;25!CL:0000624;6.14e-14;6!CL:0000542;1.82e-09;53!CL:0000898;1.70e-08;3!CL:0000226;3.81e-07;3!CL:0000842;3.81e-07;3!CL:0000625;9.39e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.18e-19,18;CL:0000789,6.18e-19,18;CL:0002420,6.18e-19,18;CL:0002419,6.18e-19,18;CL:0000790,6.18e-19,18;CL:0000838,1.08e-16,52;CL:0000542,2.94e-16,53;CL:0000051,2.94e-16,53;CL:0000084,7.28e-15,25;CL:0000827,7.28e-15,25;CL:0000624,2.64e-14,6;CL:0000898,1.34e-08,3;CL:0000988,2.46e-08,177;CL:0002087,3.08e-08,115;CL:0000037,2.35e-07,168;CL:0000226,4.70e-07,3;CL:0000842,4.70e-07,3;CL:0000625,7.25e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.27e-18;18!CL:0000051;1.82e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.92e-10;15!UBERON:0000179;3.92e-10;15!UBERON:0000463;3.92e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.68e-10,15;UBERON:0000179,8.68e-10,15;UBERON:0000463,8.68e-10,15 | |||
|phase1_expression=0.54503513781167,0,1.12763523276777,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0.123766352960047,0,0.672325146451775,0,0.730310090387373,0,0,0,0,0.286235987131057,0.410623275218653,0.251085279189606,0.305653622991805,0.410502947249729,1.02324015707783,0.786728553697808,0.383829398097213,0.154816123316076,0,0,0,0.154934401160603,0.853015394924529,0.293600439334847,0.553995408531877,0.601633342410425,0.434021741431704,0,0,0,0.872389432677388,0,0.242584061187816,0,0,0.619412741790207,0.28769239232215,0.256160706529101,0.236482229888585,0,0.645484683583826,1.35426486594342,0.376484679085209,0,0.224723484445085,0.918251677112708,0.320929027076094,0,0,0,0,0,0.56738522469114,0,0,0.521482918420201,0.868755378820466,1.21079900526674,0.368277635987565,0.632924774881769,0.211255286311942,0.212604299965044,0.838634582033504,0.44931452458598,0.750884464207532,0.64290234678832,0.570025487482497,0,1.0959849225878,0,0.546138611262131,0.889509253863555,0.853460445133014,1.60158394814405,1.72425731986345,0,1.90810750907073,0.569212969109448,1.17447437874188,1.52909291250092,0,1.68152568894461,0.263384084775077,1.7703879310245,1.17903228824749,1.64481199199607,3.00935691703221,2.93330039970231,2.36723902867367,1.94826728407911,2.00538822393312,3.82987679717288,2.65840673500345,3.5204502289452,2.0494611156108,3.25148368899696,0.657751618414705,1.65810010671509,1.44901542867526,1.92772532110679,2.40786745280742,1.04535523804977,0.793165398882963,2.68254345521345,2.40539211837841,1.77113784413652,0.637130828648193,0.651083453856419,0.950452044448374,1.50575119077773,0.895906278080929,1.24930726552346,0.473554504088034,1.64225599384209,2.21767417547206,1.60464117470104,1.30341963494519,0,0,0.383587685530591,0,0,0.579386075843295,0,0,0.472674085820339,0,0,0.196468613246569,0,0,0.324547393654683,0.522389211897802,0.531831842075461,0.715471872916026,0.571994910780128,0.371457501329565,0,0.860234595106124,0,0.56530794192401,0,0,0.208994966536811,0.775250277507987,0.35576626268671,0.33472061276467,0.402829317109147,0,0,0.367663080345869,0,0.17859945656816,0,0.225222960966644,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,1.06400514659507,0,0,0,0.311211035399766,0.269421344139376,0.653847612453835,0.151357427644931,0,0,0.312160076830321,0,0.298897361103602,1.52664848236894,0.647491777472526,0.702254033511242,0.408308342509787,0.61417158655884,0.103325781175765,1.18800285728205,0,0,0,0,0.250237039743928,0.554128230968366,0,0,0,0.567160915800105,1.07633781413317,0.640672166455702,0.635795703478686,0.300091096084402,0.618315175430633,0.772921620136887,0.37223371266318,0.675105328965065,0.876933046450788,0.252433774244115,0.460249493211497,0.646584227275248,0.355009592516614,0.503760491138201,0,0.193260853163297,0.272746120590835,0,0.487894824518382,0.662648841607426,0.464775771478074,0.414644220061482,0.504641701751257,0.36497735907583,0,0,0,0.464367928031979,0,0.828147600278907,0.337169380156203,0.723033089650446,0.220587945464788,0,0.474541238222193,0.404493924480493,0.392442930250692,0,0,0,0,0,0,0,0.590789906681404,0.882926198829301,0.368965315629341,0.686271241194102,0.109750285408626,0,0.201057944823262,0.462942225792648,0,0,0,0.115930404975077,0.117408694235822,0,0.462985512576611,0.380508304469197,0,0,0,0,0.445893486866185,0,0.671928512795438,0.283550194484773,0.447792613514241,0,0,0,0,0.207328115540772,0.144119953416961,0.25248486685276,0.126995788584338,0,0,0,0.308482478109971,0,0.285826432630578,0,0,0.2933531432838,0.387815147273333,0,0,0,0,0,0,0.266422179016099,0.57191197463259,0.542621605391443,0,0.977208552881205,0.710783897485092,0,0.301439377059586,0,0.299918973546171,0,0.502257091432126,0,0,0,0,0,0.205476322550383,0.179060963239896,1.2329365839288,1.57624608161542,0.646882724578552,1.15508732651774,0.508189248444927,0,0,0,0.637938751653163,1.49801404789436,0,0.828831026872071,0.36807447515742,0,0,0,0,0.315404830067869,0.234282829985426,0,0,0,0,0,0.347534457872331,0,0,1.6541442089831,1.07857100409308,1.38745825144478,0.303127571446259,0,0,0.248107807818777,0.767309866440312,0.561320188866147,0,0,0.160853921143607,0,0.925258162815933,0.710246901252508,0.657017248110473,0.519254429183621,0.464841513839837,0.362578348774867,0.200506470303285,0.276242966807689,0.229628896329213,0.364182336013434,0,0,0.15403067420883,0,0,0.527758144464379,0,0,0.647747748306418,1.54227252690289,0,0,0.254876273045038,0,0.223874754722178,0.877039506583738,1.8300481571743,0.256450125116389,0,0,0.824328093181778,0.183138929636687,1.23764249880882,0,0,0,0.096670718292122,0.462145851343933,0.460511024178389,0.689182862422653,0.429680979473094,0,0.170453254832202,0.178064071293475,0.165284915360978,0,0.638063562472921,0.10115778085555,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0.372158369359667,0,0.38126038784765,0,0.42793898803392,0,0,0.359744915166629,0,0.235624804691373,0.202182481573316,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,0.860468113224309,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| |||
|short_description=p7@CEP44 | |||
}} |
Latest revision as of 20:19, 16 September 2015
Short description: | p7@CEP44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CEP44_5end |
Coexpression cluster: | NA |
Association with transcript: | -17bp_to_ENST00000505124_5end |
EntrezGene: | CEP44 |
HGNC: | 29356 |
UniProt: | D6RBX1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.18e-19 | 18 |
alpha-beta T cell | 6.18e-19 | 18 |
immature T cell | 6.18e-19 | 18 |
mature T cell | 6.18e-19 | 18 |
immature alpha-beta T cell | 6.18e-19 | 18 |
lymphoid lineage restricted progenitor cell | 1.08e-16 | 52 |
lymphocyte | 2.94e-16 | 53 |
common lymphoid progenitor | 2.94e-16 | 53 |
T cell | 7.28e-15 | 25 |
pro-T cell | 7.28e-15 | 25 |
CD4-positive, alpha-beta T cell | 2.64e-14 | 6 |
naive T cell | 1.34e-08 | 3 |
hematopoietic cell | 2.46e-08 | 177 |
nongranular leukocyte | 3.08e-08 | 115 |
hematopoietic stem cell | 2.35e-07 | 168 |
single nucleate cell | 4.70e-07 | 3 |
mononuclear cell | 4.70e-07 | 3 |
CD8-positive, alpha-beta T cell | 7.25e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
blood | 8.68e-10 | 15 |
haemolymphatic fluid | 8.68e-10 | 15 |
organism substance | 8.68e-10 | 15 |