FFCP PHASE1:Hg19::chr4:175205038..175205094,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80817 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29356 | |||
|TSSclassifier=strong | |||
|UniProt=Q9C0F1,D6RBX1 | |||
|association_with_transcript=0bp_to_ENST00000396791,ENST00000457424,ENST00000514712,NM_001145314,uc003its.2,uc010iro.2_5end | |||
|cluster_id=chr4:175205038..175205094,+ | |||
|description=CAGE_peak_1_at_CEP44_5end | |||
|id=chr4:175205038..175205094,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.87e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.21e-33!115;UBERON:0001049!1.16e-19!57;UBERON:0005068!1.16e-19!57;UBERON:0006241!1.16e-19!57;UBERON:0007135!1.16e-19!57;UBERON:0005743!1.85e-16!86;UBERON:0002616!2.64e-16!59;UBERON:0002780!3.62e-16!41;UBERON:0001890!3.62e-16!41;UBERON:0006240!3.62e-16!41;UBERON:0003080!6.35e-16!42;UBERON:0001017!1.12e-15!82;UBERON:0000955!1.28e-15!69;UBERON:0006238!1.28e-15!69;UBERON:0000073!4.67e-15!94;UBERON:0001016!4.67e-15!94;UBERON:0002346!1.28e-14!90;UBERON:0003075!9.90e-14!86;UBERON:0007284!9.90e-14!86;UBERON:0000153!1.53e-12!129;UBERON:0007811!1.53e-12!129;UBERON:0001893!1.74e-12!34;UBERON:0002020!3.50e-12!34;UBERON:0003528!3.50e-12!34;UBERON:0002791!5.59e-12!33;UBERON:0001869!2.44e-11!32;UBERON:0003056!2.76e-11!61;UBERON:0000033!5.97e-11!123;UBERON:0000924!1.10e-09!173;UBERON:0006601!1.10e-09!173;UBERON:0004121!5.42e-09!169;UBERON:0000956!2.25e-08!25;UBERON:0000203!2.25e-08!25;UBERON:0002619!8.04e-08!22;UBERON:0001950!3.28e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.68e-12;41!UBERON:0001890;5.68e-12;41!UBERON:0000073;2.47e-11;53!UBERON:0002616;2.47e-11;53!UBERON:0001893;7.74e-11;34!UBERON:0003528;1.21e-10;34!UBERON:0002020;1.21e-10;34!UBERON:0002791;2.33e-10;32!UBERON:0001869;2.49e-10;32!UBERON:0007023;1.43e-09;114!UBERON:0000956;1.54e-08;25!UBERON:0000203;1.54e-08;25!UBERON:0002619;5.70e-08;22!UBERON:0000955;1.85e-07;68!UBERON:0001017;2.22e-07;75!UBERON:0001950;2.57e-07;20!UBERON:0001016;2.72e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.47e-33,114;UBERON:0001049,6.98e-20,56;UBERON:0005068,6.98e-20,56;UBERON:0006241,6.98e-20,56;UBERON:0007135,6.98e-20,56;UBERON:0000073,1.86e-18,53;UBERON:0002616,1.86e-18,53;UBERON:0002780,3.60e-16,41;UBERON:0001890,3.60e-16,41;UBERON:0003080,3.60e-16,41;UBERON:0006240,3.60e-16,41;UBERON:0001017,8.98e-16,81;UBERON:0000955,9.64e-16,68;UBERON:0006238,9.64e-16,68;UBERON:0002346,9.99e-16,86;UBERON:0003075,8.02e-15,82;UBERON:0007284,8.02e-15,82;UBERON:0001016,2.35e-14,89;UBERON:0001893,1.74e-12,34;UBERON:0003528,3.49e-12,34;UBERON:0002020,3.49e-12,34;UBERON:0003056,6.66e-12,61;UBERON:0002791,2.14e-11,32;UBERON:0001869,2.43e-11,32;UBERON:0010371,6.06e-10,104;UBERON:0004121,6.77e-10,171;UBERON:0000924,6.77e-10,171;UBERON:0006601,6.77e-10,171;UBERON:0010314,2.45e-09,132;UBERON:0011216,2.22e-08,223;UBERON:0000956,2.24e-08,25;UBERON:0000203,2.24e-08,25;UBERON:0002619,8.03e-08,22;UBERON:0001950,3.27e-07,20 | |||
|phase1_expression=3.99692434395225,4.06790995392868,5.49722175974288,3.00219895059391,7.59833860526389,1.74467704820074,5.06599756336621,8.2123583545488,4.17897005119742,2.94880723801811,2.09340350391728,4.80571018686379,2.90143676051299,5.69325223616215,1.98838425436749,4.70627602516243,2.41077811209591,2.19093027116212,2.92759679274304,4.062994916534,3.26401105990805,1.25381888591235,11.1632034981112,6.56997240349844,9.41569796961021,7.87058079203898,6.23964479819588,9.68142610158255,1.57345710739562,1.53531759238885,1.70297735647684,0.919421224478927,1.50602959389125,2.58827807116751,10.8454080812422,7.53496932183334,10.8632162553893,2.21598163412751,2.00544447470142,1.95309783644267,10.0761963407966,9.71680998056939,7.98484259665978,0.726991193897824,1.51150377475524,0.970336244751265,0.697287110717054,0.411167888021826,1.23882548358041,0.575384784644301,0.256160706529101,0.945928919554341,1.37898272294647,0.645484683583826,1.35426486594342,0.564727018627814,0.272906150057846,1.34834090667051,0.306083892370903,1.28371610830437,0,0.659702600373432,0.598390972864896,0.426224750532694,1.16083695451434,1.13477044938228,1.24564449799115,0.502497330513487,0,1.73751075764093,1.21079900526674,1.47311054395026,0.949387162322653,3.80259515361495,5.31510749912609,6.0801007197429,3.48218756554135,4.6554836780867,4.8217676009124,5.98526761856622,4.97291692997725,5.11459630540975,14.0796995569058,16.3841583378639,12.4531295540898,8.96133467389665,12.4122755981164,13.7940585589076,10.5767179645578,16.2189138271012,7.39976859842283,4.69789751496751,2.29363936875137,5.28685314316103,3.36305137788922,11.5888997301034,4.72103448273199,3.14408610199332,2.87842098599313,12.0374276681288,8.14805666583976,8.04861269749047,25.3274746930285,7.5759110681918,7.65975359434577,7.08908462667588,9.47813523177554,4.22701355094728,5.72261129263464,4.93313713811028,7.18510046243206,8.98389565778663,10.8249191108304,14.7147455449342,9.40819714244791,9.17805675850286,5.3650869104269,5.15441168223945,8.34964983664359,14.6540090589084,14.9749194386976,13.3063286222772,10.0885329782108,17.5341657281553,12.4930726552346,11.1285308460688,7.39015197228942,2.82249440514625,2.94184215361858,2.31719046212478,12.1903433156981,2.68280343881454,5.75381528295886,5.42158728576849,6.01605492763067,4.20054904986389,3.9764297352555,7.78615792484217,8.2245290932739,6.87361132133948,5.53359149866694,11.0022423418079,2.91436230634034,3.70784442784429,4.86821090482025,4.52737316978095,4.52057065764142,3.33886874027479,3.43196946468077,3.34311751196608,3.57772333260069,0,2.42998351125316,3.95715559346807,1.25849830862972,1.6507082516404,1.8809546988313,5.94358546089456,5.33649394030065,6.02497102976406,3.62546385398232,2.28081631715554,2.4406205754817,2.94130464276695,1.62028389576352,7.59047690414678,3.81699933464489,3.15312145353302,4.5994991239765,1.89853131913626,2.01521918323448,5.27121669744253,3.87780264148325,3.05265836499774,1.98788780678127,5.06522046658319,9.93068856099141,10.3261183469573,2.83734705758686,7.28880880184999,0,1.72667283892012,7.78027588499416,6.19669091520565,6.37501422142489,6.05429710579726,3.45705554687999,4.92075006850973,2.49728061464256,1.71141546463335,3.73621701379503,9.51219439014496,5.6655530528846,7.58434356192142,7.55370433643105,6.75588745214724,5.6829179646671,8.31602000097437,3.4617370098998,1.82032272387605,0.718618141816238,8.24846958374924,10.509955669245,6.37247465613621,2.63386572528503,4.90380473278431,3.00476117813194,3.51639767796065,7.35497506324334,13.2405581067512,7.41761654058466,6.00182192168805,7.4197821051676,10.3056216018252,6.88632368426882,8.27004027982204,5.35903528386592,6.31084435610286,8.46859067509154,8.89053312503465,6.03516307278244,6.95189477770718,3.73033303083073,2.51239109112286,3.54569956768085,2.86804595389004,3.53723747775827,4.10842281796604,5.22872742912833,5.07939169575315,4.03713361401005,7.2995471815166,1.56449532329816,1.92972281457866,1.38134921352481,6.03678306441573,4.33127689001751,1.8929088006375,2.36018566109342,2.41011029883482,1.98529150918309,1.74303555273925,1.89816495288877,1.8876383142423,1.17732879075208,3.8474715694639,2.21446636387394,0,2.8810180793198,0,7.60530208930985,0.982827216677626,6.49868897349544,10.153651286537,6.64137568132813,3.77449182656756,2.08525542276389,1.1240175325762,3.51851403440708,10.1847289674383,6.19035780089617,2.07986957055916,1.44331342025273,6.4921026786043,6.10525210026273,1.58803092537181,1.85194205030644,3.04406643575357,6.3216351836742,1.71697232418975,7.87894419479671,6.08411089362018,5.35072184239422,0.93733833986777,6.55130299975552,3.54437743105966,10.8365812470446,7.84711633987697,2.68367875415648,8.86793828212698,9.24508557138873,10.3664057770386,13.8355155280283,8.96321277327298,6.1592957463404,2.67391897890794,3.51652341630141,0,3.29047976650635,2.40274446275134,4.57322292208925,4.93376771119587,0,6.52710743806455,3.74887975697556,7.15312891703765,3.381211010224,5.31876233169741,3.12022310734098,4.37252536245642,4.25547396069835,1.3321108950805,9.15059159412144,3.25572963234866,1.64648067356154,5.86325131728723,7.81862287233601,4.75171123760058,3.01439377059586,1.74306691720059,2.7992437530976,2.43247561282381,2.00902836572851,0,4.79249710983165,9.18895486672911,5.70547620162874,4.34343920002738,3.90405012845728,2.68591444859843,14.234813287178,3.34952292343276,2.80315847317372,1.92514554419623,5.33598710867173,10.4111883086097,4.63973287666617,7.53823194004569,5.74144876487847,5.24304916763028,2.99161459204025,5.8018171881045,5.88919160251872,2.50085260529839,4.6115054028955,3.32753378449291,2.14114786556594,4.25796520591624,4.09994952474496,3.61135319673263,2.27407504055985,2.0694614258501,4.64957918974806,2.02806085395873,6.16873662723388,1.56640925970192,1.02943027143257,5.37596867919507,3.01999881146064,3.94891963872744,2.12189300012382,1.66435439510497,1.20956117331872,5.21026396419431,8.90079445070762,3.92924132206303,4.74114852246094,3.07024349440022,2.73451665944133,2.96836132889982,4.31787142647436,3.9063579568888,6.15953670103569,0.519254429183621,2.78904908303902,5.92211302998949,1.60405176242628,6.72191219232043,3.21480454860899,6.3731908802351,3.2781103739856,5.86559496779635,7.70153371044148,0.784349769176855,1.46139224653261,8.76078519810868,1.13733384070897,1.02056223165909,3.88648648983851,0,1.08378575017541,0.501689773854853,1.78413391131527,1.66215201785745,1.56712328305525,26.3111851975121,23.2677551412161,7.94995387860806,3.93617574839647,13.3405141812364,9.89193711818134,2.93022287418699,2.88783249722058,2.29706215198469,1.30012049207304,0,6.86362099874066,6.47004191881506,5.67963596486679,4.41077031950498,11.386545956037,4.35050081742686,6.98858344812027,4.62966585363034,7.76839102196597,3.0750410778417,15.4411382118447,5.0578890427775,3.253918845081,8.49993336442728,0.6970372701606,2.46426864140871,2.12922412126809,1.73986598415015,1.8532421910392,5.72499546967965,5.95453390975468,5.69482964493707,2.09693213316207,2.04718233049067,11.1264136888819,3.5002357271853,0.78494864019923,5.93579110024939,3.84351841630477,3.65218447271628,1.2130948894399,0,1.26377536871694,1.46290121726877,1.46228093778771,2.11300293513511,5.7329962791354,2.40389234321312,1.13008116620243,6.06501877900737,1.99031692572366,3.5076070820301,0.578775534266688,5.24715801637306,1.42037263873893,1.239293992399,0.563391205064483,6.45351084918232,3.242218353433,3.92338156629375,4.96665489698837,3.58882980006029,6.91519275215794,2.27683904259429,2.0996083214699,5.09977197445214,1.34060455107157,0,7.90807926524945,2.15252686335615,0,1.33029046061003,4.59446800413919,12.1787426215721,6.117097657139,7.97506062043828,12.388052323805,7.81588318863769,7.78167973431261,9.72056587028607,5.55187623405989,6.72991648103081,6.73735898684351,4.16568367167754,9.47596193141165,9.52176805644536,11.7384041524883,6.69590345461054,2.99369057149225,10.3412899871478,7.4085753953359,10.7125240290603,7.86232098717685,4.56469358066384,8.46071437174326,10.0253790836027,5.41733688965131,10.2776368066368,12.3097821386539,17.0338495076131,4.12206413706918,6.75929681478608,6.03925491309523,5.50602167649298,5.08009048045305,11.1362469558097,2.46174797895425,5.40911356951966,8.65987116794332,0,5.05279459102193,9.37652347340122,4.97578139173005,10.9214516591929,2.55722532125772,7.1623345421307,7.7210817016486,14.1293922965647,7.95318118213038,9.42485089950435,11.0195617972677,2.96646973608167,6.5448876519678,8.567663494796,11.3276405367771,3.77899121781414,8.28376328267454,14.4009222389451,5.59871257791253,5.93131117572357,9.66714343248289,10.7430197747643,16.0788751188202,2.3948309234694,2.22273980289274,4.84666373047609,10.0189546014799,5.98841394003583,3.1251331330228,6.82187999970327,5.79999660347835,4.77932482799099,5.59358030644086,5.67330436243047,5.17115059862197,2.33283690706603,7.98674976693144,7.97167247232455,10.9742759149121,19.8356257212208,13.7118282314719,14.4818333287238,4.16832254592548,16.3407695278485,7.52888219104458,16.6212558368202,2.62066728448103,4.6112780877612,9.42455266302607,8.47449500991663,9.57003479195758,4.30508688988753,7.99552164027952,6.13159789174419,2.98262487150547,7.14710232170673,8.57263510345287,9.60706418156924,8.05543617484045,9.48768663620925,9.6951313178031,5.69694774225673,7.99840759979824,6.2195351430934,10.3866547076204,5.97157158647103,7.16506272477047,9.16545217400438,13.0469296619474,9.51442329888072,10.6510388495564,17.1872889100726,4.81546588379273,8.66778449183755,11.6771065098026,7.43525551941941,1.69946265673865,16.177960516825,10.8891644443797,7.34574627913176,15.2911522700941,5.41164309892173,1.9700756365477,4.6525771089503,7.94380694101197,6.90652420495896,7.16834578637753,4.26914319044689,6.65638430463066,3.29763502836749,7.05545261383519,4.87531556850254,15.3759468052987,7.91135749369436,2.32215195093804,4.31226970808495,2.54557916864949,9.79589066533036,8.64910041576703,12.8809022244904,6.9891381569843,3.97429223405979,15.131280233455,0,6.6531820808773,8.1112138000954,6.5937171162103,9.79814836647921,8.24663492394593,5.66263492944483,3.16920555573929,7.33089959836052,2.82832841540154,3.53350935791397,4.18411385249333,11.3218021576317,2.31160471921215,19.8138695274231,15.3334024359032,6.38732940334862,7.30601250413927,6.57218385698286,14.8019672674295,8.93725653645566,4.30723814746088,7.18844401796368,6.00916467391199,6.02562935093056,15.2506482544869,5.04419836959365,10.4846354574708,2.44227865152393,1.31865373409866,2.96575592958414,4.52766414967844,8.21331321038109,11.1332156573302,9.26183161558714,3.69732241469544,2.61324929534744,4.56984371832104,2.0247650239635,6.96421759102155,10.6919219718123,4.69608562638973,7.72295931532142,12.9562832693445,6.01921918160617,4.12360880465543,5.56554072226391,10.7204298956005,6.62091970365432,4.068296602476,1.08599920350743,0.864221491201268,3.26587360109409,2.39460383124975,4.843458724211,2.72620834856675,4.8724199353654,3.07759690723973,3.97520666736664,13.3161445052397,10.0496777324444,5.30369197441421,4.9337051562167,9.50407971852483,25.3098931210462,6.62782488555513,9.42715441442707,5.73073732504038,8.76906708342451,7.66009509324218,6.52821364043369,9.02483618481721,11.0284407634846,11.1476694441334,11.7790572187676,5.31640907980192,9.02994360274527,11.267183763585,18.9225034577724,11.2038342052221,16.0829683618183,15.4950471128579,3.8743926468253,6.82421028937415,9.99128667407386,5.64637967275612,6.55668868129634,5.21715702998971,2.83584125485061,4.44055288709727,4.43844689202091,3.4092540949516,2.51567901752575,3.55924488638614,5.72100170992309,2.26846385644859,2.64243240990727,3.40066844976158,2.54874827461924,4.49803112163605,4.34736279253526,3.31764966272684,6.38020114939188,4.69570555630561,3.00515217994437,1.52322084867518,3.66183659884195,2.90957854724095,1.50374779859484,6.96050639817741,3.98095888698616,3.20022211730523,2.40376993627955,3.03074539889327,12.6184898228651,5.39335525140449,3.21662387062389,2.87093721161733,2.493765180635,2.31522474323834,5.87368090815522,3.76086566271124,0.617602894321944,5.48210123946768,4.41722864864703,3.47245268887647,3.88567613502067,3.33113974164331,5.52688546769918,1.51929978088691,12.4432592536558,12.8607803833996,11.0277817460091,14.2301893002584,4.25892803500336,1.72041036127604,4.22624246717254,6.79957145906762,12.8030075632969,12.5716935152395,2.27006381426734,2.57748330352577,8.67252947860556,3.73246356019784,1.91841556955478,2.04867141653695,6.44790361609175,10.3749156282413,6.95903372811503,11.9041955256942,11.0302830190512,6.70373901567893,2.54403480522735,19.0056805453021,7.20513673456923,5.99549104274163,3.6749457282384,14.8369509972822,9.91876034279095,9.57803154342908,8.40977093387096,9.57872445642529,9.05960007281254,10.1729656748066,24.2708014440562,2.74813611802872,3.06721280704125,5.86971515269373,4.15892398141218,5.72073143200751,11.7361187430217,3.97832444232549,10.4542356405468,3.22728109925632,3.90757005616546,5.76194727859129,4.74938560779281,9.4627895178909,13.9802800160077,14.8404838736631,13.0212681795746,11.1611825941276,8.20462213527329,6.57909320228619,11.9090682813431,7.38659226310407,6.64364623725895,13.3925458969572,20.5133070553483,15.7811057101524,27.0918007708044,6.03176117105944,8.41208109157188,8.23142445299609,14.2736439251347,10.6551893171816,2.6002644994473,4.22679327189863,13.3438257845874,10.5267445243721,7.00680408284473,14.6105395281519,6.47782773655864,22.9320810185784,19.0127607509906,9.79684392742905,1.74362138052188,11.6485042442728,5.61197955311177,4.97318793991288,11.4381379652946,7.60385627995501,14.1975028410692,4.49661602776148,4.26067023795788,15.6653208570644,6.64409918777745,1.86123831398592,3.82215575590973,1.11855431797792,7.26311728752798,3.65753774946808,14.2434344181337,4.72248911538736,5.799072156691,11.1713528403602,3.50909195193158,7.75908023129336,7.61088580976439,11.6334464500129,8.57536030614347,8.90680777043374,6.32828096485146,8.08670373864642,6.1141248526998,15.9346409140039,7.77732605435366,12.7600503624714,18.4168768202793,10.1437374620016,3.56846940844415,8.36456870020697,9.08856220427438,8.09523362991924,8.21348117586025,4.94052820401969,12.9991014036453,9.49437304720472,14.2206077855408,15.6240145635082,3.31320280605688,10.0627405482554,6.54526035510566,14.2837246939158,4.83593523616777,3.23522940041993,3.02838593486652,6.93915336592934,3.49649830283826,5.19463854146892,3.87557553019531,7.21486994217013,10.5679134465072,9.77759403240263,9.54811597549817,11.5224575967157,18.2417276680931,15.2046503916986,10.4484651131481,13.3316081619695,10.334225573761,15.7669774311479,6.84004361741742,10.5654282741754,11.5206797706185,8.70866991587845,8.21359922604674,12.1907215956403,7.74599818240905,7.31852784401229,4.88419611665847,6.29691340678521,3.8614456457388,3.23370727583713,4.69281884806909,21.025528399453,9.76550827957772,7.98908129022615,10.8687848539154,5.77023286145819 | |||
|short_description=p1@CEP44 | |||
}} |
Latest revision as of 20:20, 16 September 2015
Short description: | p1@CEP44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CEP44_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000396791, ENST00000457424, ENST00000514712, NM_001145314, uc003its.2, uc010iro.2_5end |
EntrezGene: | CEP44 |
HGNC: | 29356 |
UniProt: | Q9C0F1D6RBX1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data