FFCP PHASE1:Hg19::chr2:128180886..128180901,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5624 | |EntrezGene=5624 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9451 | |HGNC=9451 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=22bp_to_ENST00000464089_5end | |association_with_transcript=22bp_to_ENST00000464089_5end | ||
|cluster_id=chr2:128180886..128180901,+ | |||
|coexpression_cluster_id=C44 | |coexpression_cluster_id=C44 | ||
|description=CAGE_peak_4_at_PROC_5end | |description=CAGE_peak_4_at_PROC_5end | ||
|id=chr2:128180886..128180901,+ | |id=chr2:128180886..128180901,+ | ||
|ontology_enrichment_celltype=CL:0000784;8.03e-27;3!CL:0000451;2.00e-19;10!CL:0001014;8.78e-18;2!CL:0001016;8.78e-18;2!CL:0000860;6.91e-15;33!CL:0002057;6.91e-15;33!CL:0000840;2.40e-13;5!CL:0000767;4.34e-12;3!CL:0000473;7.41e-11;39!CL:0000234;7.41e-11;39!CL:0000990;4.55e-09;8!CL:0000453;1.19e-07;5!CL:0000576;5.53e-07;48!CL:0000766;6.58e-07;69 | |ontology_enrichment_celltype=CL:0002057!2.05e-24!42;CL:0000860!2.88e-22!45;CL:0002009!7.91e-22!65;CL:0000557!1.33e-20!71;CL:0002194!3.18e-19!63;CL:0000576!3.18e-19!63;CL:0000040!3.18e-19!63;CL:0000559!3.18e-19!63;CL:0000766!1.36e-18!76;CL:0000839!9.31e-18!70;CL:0000763!1.72e-14!112;CL:0000049!1.72e-14!112;CL:0000738!3.16e-12!140;CL:0000037!5.56e-10!172;CL:0000566!5.56e-10!172;CL:0002031!1.53e-09!124;CL:0000988!7.59e-09!182;CL:0002087!1.31e-08!119;CL:0002032!5.66e-08!165;CL:0000837!5.66e-08!165;CL:0000784!5.96e-08!3;CL:0000451!8.34e-07!10 | ||
| | |ontology_enrichment_celltype_v019=CL:0000784;8.03e-27;3!CL:0000451;2.00e-19;10!CL:0001014;8.78e-18;2!CL:0001016;8.78e-18;2!CL:0000860;6.91e-15;33!CL:0002057;6.91e-15;33!CL:0000840;2.40e-13;5!CL:0000767;4.34e-12;3!CL:0000473;7.41e-11;39!CL:0000234;7.41e-11;39!CL:0000990;4.55e-09;8!CL:0000453;1.19e-07;5!CL:0000576;5.53e-07;48!CL:0000766;6.58e-07;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000784,8.05e-27,3;CL:0000451,1.66e-19,10;CL:0001014,5.75e-18,2;CL:0001016,5.75e-18,2;CL:0002009,1.41e-14,61;CL:0000840,1.95e-13,5;CL:0001029,1.95e-13,5;CL:0000557,3.93e-13,67;CL:0000766,4.95e-12,72;CL:0000767,6.23e-12,3;CL:0000860,1.06e-11,42;CL:0002057,1.06e-11,42;CL:0000738,3.62e-11,136;CL:0000763,1.03e-10,108;CL:0000049,1.03e-10,108;CL:0000473,4.14e-10,48;CL:0000234,4.14e-10,48;CL:0002194,5.11e-10,59;CL:0000576,5.11e-10,59;CL:0000040,5.11e-10,59;CL:0000559,5.11e-10,59;CL:0000990,3.97e-09,8;CL:0000839,7.81e-09,66;CL:0000037,1.51e-08,168;CL:0000988,5.58e-08,177;CL:0000453,1.01e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;2.65e-09;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.40e-18!80;UBERON:0002405!7.03e-18!115;UBERON:0002390!1.10e-16!102;UBERON:0003061!1.10e-16!102;UBERON:0001474!1.25e-16!86;UBERON:0002193!2.79e-14!112;UBERON:0004765!8.42e-13!101;UBERON:0001434!8.42e-13!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.19e-11,76;UBERON:0001474,1.97e-10,82;UBERON:0004765,2.35e-09,90;UBERON:0002405,5.34e-09,93;UBERON:0002390,1.88e-08,98;UBERON:0003061,1.88e-08,98;UBERON:0001434,2.99e-08,100;UBERON:0002193,1.64e-07,108 | |||
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| ||
|short_description=p4@PROC | |short_description=p4@PROC | ||
}} | }} |
Latest revision as of 20:40, 16 September 2015
Short description: | p4@PROC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PROC_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | 22bp_to_ENST00000464089_5end |
EntrezGene: | PROC |
HGNC: | 9451 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 8.05e-27 | 3 |
dendritic cell | 1.66e-19 | 10 |
CD1a-positive Langerhans cell | 5.75e-18 | 2 |
immature CD1a-positive Langerhans cell | 5.75e-18 | 2 |
macrophage dendritic cell progenitor | 1.41e-14 | 61 |
immature conventional dendritic cell | 1.95e-13 | 5 |
common dendritic progenitor | 1.95e-13 | 5 |
granulocyte monocyte progenitor cell | 3.93e-13 | 67 |
myeloid leukocyte | 4.95e-12 | 72 |
basophil | 6.23e-12 | 3 |
classical monocyte | 1.06e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.06e-11 | 42 |
leukocyte | 3.62e-11 | 136 |
myeloid cell | 1.03e-10 | 108 |
common myeloid progenitor | 1.03e-10 | 108 |
defensive cell | 4.14e-10 | 48 |
phagocyte | 4.14e-10 | 48 |
monopoietic cell | 5.11e-10 | 59 |
monocyte | 5.11e-10 | 59 |
monoblast | 5.11e-10 | 59 |
promonocyte | 5.11e-10 | 59 |
conventional dendritic cell | 3.97e-09 | 8 |
myeloid lineage restricted progenitor cell | 7.81e-09 | 66 |
hematopoietic stem cell | 1.51e-08 | 168 |
hematopoietic cell | 5.58e-08 | 177 |
Langerhans cell | 1.01e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.19e-11 | 76 |
bone element | 1.97e-10 | 82 |
skeletal element | 2.35e-09 | 90 |
immune system | 5.34e-09 | 93 |
hematopoietic system | 1.88e-08 | 98 |
blood island | 1.88e-08 | 98 |
skeletal system | 2.99e-08 | 100 |
hemolymphoid system | 1.64e-07 | 108 |