FFCP PHASE1:Hg19::chr1:245133404..245133423,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84288 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28166 | |||
|TSSclassifier=strong | |||
|UniProt=Q5VUJ9 | |||
|association_with_transcript=120bp_to_ENST00000366522,NR_026586,uc001ibd.2_5end | |||
|cluster_id=chr1:245133404..245133423,+ | |||
|description=CAGE_peak_8_at_EFCAB2_5end | |||
|id=chr1:245133404..245133423,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.45e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.90e-22!115;UBERON:0001049!2.53e-16!57;UBERON:0005068!2.53e-16!57;UBERON:0006241!2.53e-16!57;UBERON:0007135!2.53e-16!57;UBERON:0003080!1.44e-13!42;UBERON:0002780!4.32e-13!41;UBERON:0001890!4.32e-13!41;UBERON:0006240!4.32e-13!41;UBERON:0002616!9.80e-13!59;UBERON:0000955!2.12e-12!69;UBERON:0006238!2.12e-12!69;UBERON:0001017!3.91e-12!82;UBERON:0000073!1.55e-11!94;UBERON:0001016!1.55e-11!94;UBERON:0005743!4.72e-11!86;UBERON:0001893!2.15e-10!34;UBERON:0002020!4.66e-10!34;UBERON:0003528!4.66e-10!34;UBERON:0002791!6.08e-10!33;UBERON:0003075!8.02e-10!86;UBERON:0007284!8.02e-10!86;UBERON:0001869!3.14e-09!32;UBERON:0002346!7.13e-09!90;UBERON:0002619!8.48e-08!22;UBERON:0000062!9.78e-08!511;UBERON:0003056!5.25e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.62e-14;41!UBERON:0001890;5.62e-14;41!UBERON:0000073;1.73e-11;53!UBERON:0002616;1.73e-11;53!UBERON:0001893;1.73e-11;34!UBERON:0001869;4.36e-10;32!UBERON:0007023;4.64e-10;114!UBERON:0002791;6.41e-10;32!UBERON:0003528;3.72e-09;34!UBERON:0002020;3.72e-09;34!UBERON:0002619;6.61e-09;22!UBERON:0001017;2.72e-08;75!UBERON:0000956;1.81e-07;25!UBERON:0000203;1.81e-07;25!UBERON:0001894;3.36e-07;7!UBERON:0001950;4.47e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.27e-29,114;UBERON:0001049,5.20e-21,56;UBERON:0005068,5.20e-21,56;UBERON:0006241,5.20e-21,56;UBERON:0007135,5.20e-21,56;UBERON:0000073,1.72e-19,53;UBERON:0002616,1.72e-19,53;UBERON:0002780,1.04e-18,41;UBERON:0001890,1.04e-18,41;UBERON:0003080,1.04e-18,41;UBERON:0006240,1.04e-18,41;UBERON:0001016,2.21e-17,89;UBERON:0003075,2.87e-17,82;UBERON:0007284,2.87e-17,82;UBERON:0001017,3.54e-17,81;UBERON:0000955,3.90e-16,68;UBERON:0006238,3.90e-16,68;UBERON:0002346,6.49e-16,86;UBERON:0003056,3.66e-14,61;UBERON:0001893,1.12e-13,34;UBERON:0003528,3.70e-12,34;UBERON:0002020,3.70e-12,34;UBERON:0010371,5.22e-12,104;UBERON:0002791,1.09e-11,32;UBERON:0001869,1.74e-11,32;UBERON:0010314,6.97e-11,132;UBERON:0002619,2.26e-09,22;UBERON:0000956,7.25e-08,25;UBERON:0000203,7.25e-08,25;UBERON:0004121,2.06e-07,171;UBERON:0000924,2.06e-07,171;UBERON:0006601,2.06e-07,171;UBERON:0001950,2.15e-07,20;UBERON:0001894,5.51e-07,7;UBERON:0006222,5.51e-07,7 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.281908808191942,0,0,0.872338524100369,0,0,0.522371256399677,0,0,0.218441372130172,0,0.37129905888014,0.331397375727916,0.672325146451775,0.602694528023977,0,0.487932798790507,0.246242116153576,0.408001382488506,0,0.286235987131057,0,0.125542639594803,0.0764134057479513,0,0,1.96682138424452,1.53531759238885,0.309632246632152,0,0,0,0.542270404062111,0,0.587200878669695,1.10799081706375,1.20326668482085,2.60413044859022,0.223915474239924,0.32389366601898,0.515151135268373,0.581592955118259,0.377875943688809,0.485168122375632,0.697287110717054,1.23350366406548,0.929119112685311,0.575384784644301,0,0.236482229888585,1.03423704220986,0,0,1.12945403725563,0.818718450173537,0.224723484445085,0.612167784741805,0.641858054152187,1.27867425159808,0.659702600373432,0.398927315243264,0.852449501065388,0.290209238628584,0.56738522469114,0,0.75374599577023,1.0429658368404,0.217188844705117,0.605399502633369,0.736555271975129,1.58231193720442,0.211255286311942,0.425208599930087,0.838634582033504,1.34794357375794,1.95229960693958,0.964353520182481,0.570025487482497,0.39783335439818,0.730656615058536,0,0,0,0,0.400395987036012,0,0,0,1.1384259382189,0.587237189370939,0.382273228125229,0,1.12101712596307,1.58030450865046,0.393419540227666,1.57204305099666,0.616804496998528,0,0.977766799900771,0.473447805734733,0,0.222820913770347,0.294605907474837,0.886135578334485,0.812411591295047,0.128091319725675,0,0.164437904603676,0,0.289803085735052,0.444859689486181,1.60524496853828,1.04535523804977,0,0.766440987203842,1.03088233644789,1.26509846009751,0,0,0,0.602300476311091,0,0,0.473554504088034,0,1.20964045934839,0.534880391567015,0.579297615531196,0,0,0.12786256184353,0.361439152384566,1.50401373190767,0.579386075843295,0.795285947051099,1.94653948121054,0.0945348171640679,0,0,1.0478326039817,0,0,0,0,0,0.476981248610684,0.571994910780128,0,0,0,0,0.56530794192401,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,1.05927344650575,0.860509862246441,0.354668382198357,0.560677600142307,1.06748995729705,0,0.622422070799533,0.269421344139376,0.163461903113459,0,0,0.70296429550139,1.24864030732128,0,0,0.469737994575059,0.323745888736263,0.280901613404497,0.204154171254893,0,0.619954687054593,0,0.494533858557114,0,0,0,0,0.831192346452549,0,0.612975591598039,0.901428353439581,0.226864366320042,1.07633781413317,1.2813443329114,0.423863802319124,0.900273288253207,0.206105058476878,2.57640540045629,0.37223371266318,1.5189869901714,0.292311015483596,1.26216887122057,1.01254888506529,0.646584227275248,2.4850671476163,0.705264687593482,0.339121184620975,0.193260853163297,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0,1.44375896333917,0.473227200159376,0.168584690078102,0.241011029883482,0.992645754591546,0.871517776369625,0.71181185733329,0.269662616320329,0.392442930250692,0.38474715694639,0,0,0,1.47008711385542,3.80265104465493,0.982827216677626,1.18157981336281,0,0.122988438543114,0,0.109750285408626,0,0,0.370353780634118,0.325808305310325,0,0,0,0.352226082707465,0,0,0.380508304469197,0,0,0.492434012174795,0,0.594524649154913,0,0.503946384596579,0.425325291727159,0.0895585227028483,0.581267877027924,0,0,0.528290604079356,1.86595303986695,0.864719720501769,1.76739406796932,0,0.381988425558278,0,0,0,0,0,0.224262168690721,0.43596006883328,0.07333828582095,0.646358578788889,7.15312891703765,0,1.06375246633948,1.04007436911366,0.771622122786426,0,0,0.285955987316295,0,0,0.325736184293735,0.355391948742546,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0.579125226670317,0.205476322550383,0.179060963239896,0,0.788123040807709,0.431255149719035,0.513372145118994,0.254094624222463,1.30139853857622,0,0.670065061337395,0,0,0,0.828831026872071,0.24538298343828,0,0,0,0.356857977594324,0.315404830067869,0.234282829985426,0,0,1.03473071292505,0,0.184369168541703,0.173767228936166,0.195801157462741,0,0.206768026122887,0.647142602455851,0.426910231213777,0.909382714338778,0,0,1.73675465473144,0.920771839728375,0.561320188866147,0.256278298511402,0.511707249066704,0.321707842287215,0,0,0.532685175939381,0.574890092096664,0.519254429183621,0.116210378459959,0.483437798366489,0.200506470303285,0.184161977871793,0.574072240823034,0.182091168006717,0.262248829918848,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0.219259876645935,0,0,0,0,0.824328093181778,0.0915694648183434,0.247528499761764,0,0,0,0.096670718292122,0,0.460511024178389,0.275673144969061,1.07420244868274,0.725083469571143,0.426133137080504,0.178064071293475,0.330569830721956,0.192190067365106,1.53135254993501,0.50578890427775,0.464845549297286,0.62962469366128,0,0,0,0.869932992075073,0.18532421910392,0.143124886741991,0.372158369359667,0,0.38126038784765,0,0,0.318203247925937,0,0.359744915166629,0.54907405947211,0.471249609382746,0,0,0,0,0.974853958525138,1.05650146756755,0.682499557039929,0.565621727814851,0,0,0.66343897524122,0,0.578775534266688,0,0,0.30982349809975,0.563391205064483,0,0.0982490410131212,0,0,0.211107635297664,0.987884678879706,0,1.04980416073495,0.288666338176536,0,0,0.376575203107117,0,0,0,0.229723400206959,0,0,0.569647187174163,0,0,0,0,0,0.427296284509893,1.92495971052672,0,0,0.144269212976445,0.0711418433484141,0,0,0.957526850661834,0.211673582723883,0,0.280797178113459,0.912938716132769,0.313359791546046,0,0,1.2847046008296,1.41259795033733,1.70338495076131,2.40453741329035,1.22896305723383,3.35514161838624,1.83534055883099,0.781552381608161,0,0,0.270455678475983,0,0,0,1.46508179271894,0.242721043499027,0,0.568272293612826,0.23874448473769,0,0.614321404198464,0.994147647766298,0.984685914873589,0.222617410045812,0.824019371133798,0,0.597743964753209,0.276283915531148,0,0.102268682502155,0.123084805461069,0,0.269605053441981,1.07412704805365,3.06943422136123,1.7755813014648,0,1.11136990144637,1.93866549219044,1.76259386507517,0,0,0.437299999980979,1.44999915086959,0,0.508507300585533,0.472775363535873,0,0,0.173624994933292,1.77148277162768,1.68835014075571,0,0.995213339381022,0.886642856860642,1.31631238292384,1.41620002574687,0,1.84680620409113,0.455768223388005,0,0.359030577639089,0,0.31900115973192,0.183195186803725,0.533034776018635,0,0.31396051279005,0,0,0.392125068635479,0.335643173951685,0,0.317873157960757,0,0.163232808159148,0,0,0,0.884575645033392,0,0.889563386041866,0.370691816839509,0.208843899010911,4.1114691118213,0,1.1713222286267,0.182454789215666,0,0.971121518136371,0.394584402849391,0,1.83643656978294,1.45329133145522,1.65355761355942,0.207376382794494,0,0,0.313932918407225,0,0,0.138674673013139,0.173559738335131,0,0,2.44617335538842,1.20390222730132,0.19351266257817,0.584714536689484,0.0821154570532092,0.387956065953678,0.617792886840502,0.90392296312213,0,0,1.83601308272048,0.586654148204409,0.64127056201227,0.85381197895741,0.19980960958213,0.432271251462318,0.343609788497747,0.343189995723929,0.288109595976299,0.124252535565433,0,0.271808412147228,0.313808538937,0.101998217636322,1.15580235960608,0.600420288709789,3.01191833562385,8.94226116468806,0.429765441419957,0,1.39641200636127,0.687481272035051,5.0251111720377,0.199679000498991,0.429226048136571,1.11585728720936,1.2764859772478,1.08089965062721,0,0.236349546921671,0.0824158583811665,0.13480708770837,0.492137407573744,0.0846733320657845,2.38568906942791,1.77064427945048,0,0,0,0.449947783103001,1.5476039091159,1.94398581305679,0,0.236417121897595,0.472091293214983,0.528001682597033,0.35857467866569,0,0,0,0.5085370753095,0.542999601753713,0,0,1.19730191562487,0,0.681552087141687,0,0.879313402068495,0,1.93924434542326,0.66116300871345,2.22412889249628,0,1.60181118851542,4.24451623769098,2.89967338743037,0.496166021811951,0,0,0,3.80812462358632,1.2534494701135,0.612691153526923,1.96723578425883,0.157054096250234,0.886068179966986,1.58634144372552,1.502291168478,2.29363678276028,1.44207766997908,1.55241007353459,0.415045904808692,0.37494122388632,0.151649117541648,0.285465333544967,0,0.468334905806882,0.144921028610825,0.298509605773748,0.934853239388898,0.554805861502613,0.378806010550178,0.251567901752575,0.889811221596536,0.457680136793847,0.453692771289717,0,0.443565449968902,0.159296767163702,0.449803112163605,0,0.414706207840855,0.265841714557995,0.521745061811734,0,0,0,0.909243296012797,0.214821114084977,0,0,0,1.03018711554838,0.336749488765919,0,0,0,0.521988583930423,0.453411851024545,0,0.734210113519403,0.179088841081487,0,0,0.176689145945881,0,0.506827321959218,0.512483037175893,0,0,0.829550616910385,0,0,0,1.31043939538565,0.491545817507439,1.26787274015176,0.19998739585493,0.640150378164845,0.172214979660816,0,0.920529751259204,0,0,1.15104934173287,1.1860729253635,0.629063767423586,0.109209638192014,0.169732529954025,0.425149840203366,0,0,0.954013051960256,0,0,0.352675943690684,0.3062454773532,1.79841830270087,0,1.75597244962866,1.02558182120378,0.252071696221718,0.691572524642179,1.13032951942296,8.56616521554926,0.490738592505128,0,0,0.115525666150338,0.762764190934334,0.690359926060101,1.19349733269765,1.27857558193737,0.20170506870352,3.12605604493237,0.261906694481422,0.655087670040387,0,1.41828927698629,2.34323429584154,2.06686796501184,1.01465296310251,0.546974809018219,0.548257766857182,0.992422356778588,0,0.255524855279191,1.60710550763486,0.336283722218824,1.21393120847326,1.13831095675649,0.620916591138472,0.115233987555779,0.514464028312255,1.42736439251347,1.31545547125698,0,0.333694205676207,2.43328587836593,0.628462359664008,0.280272163313789,0,0,0,1.28657779517981,0.316027223465453,0.581207126840626,0.347716544605159,0.801711364730253,0.62164849248911,0.3414369541879,0,0,0.118332000730565,0.170426809518315,2.11693525095465,0.4582137370881,0.31020638566432,0,0.335566295393377,0.196300467230486,0.243835849964539,0.647428837187895,0.615976841137482,0,0.971421986118279,0,1.19370465096821,0,0.11294608203896,0,0.150962843566674,0.231522474323834,0,0.940634592723046,0.980593287015622,0.471353094203252,1.57046773691956,2.67341760294377,0.8453114551668,1.0195626881269,0.0939839179798536,0.709036767709349,0.0999411559249289,0,0,0.401206833445841,0,0.458729283404541,2.58011249672612,0,1.42782129400921,1.74540276136151,0,0,0,0.432626562123789,0,0,0.126698501011437,0.101988829741982,0.26721740526556,0.459474497674225,0,1.43979526614655,0,2.48750831837634,2.48239190068549,1.70587185520785,0.952257725854961,0.0645889098360061,0.248298857183432,0.224263725161227,1.33659032384146,2.62752345645685,0.217716747896961,0,0.471464371102113,0.573777643141411,1.33064142618405,0.244209805832924,0.320182037633146,0,0.269475606319761,2.34640942403454,3.05603610457166,0,2.66302709674205,1.00636896795513,0.320568492303233 | |||
|short_description=p8@EFCAB2 | |||
}} |
Latest revision as of 21:30, 16 September 2015
Short description: | p8@EFCAB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_EFCAB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 120bp_to_ENST00000366522, NR_026586, uc001ibd.2_5end |
EntrezGene: | EFCAB2 |
HGNC: | 28166 |
UniProt: | Q5VUJ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data