FFCP PHASE1:Hg19::chr4:176828294..176828305,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:176828294..176828305,- to FFCP PHASE1:Hg19::chr4:176828294..176828305,-: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2823 | |EntrezGene=2823 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4460 | |HGNC=4460 | ||
|TSSclassifier=strong | |||
|UniProt=D6R9T7 | |UniProt=D6R9T7 | ||
|association_with_transcript=13bp_to_ENST00000513365_5end | |||
|cluster_id=chr4:176828294..176828305,- | |||
|coexpression_cluster_id=C4395 | |||
|description=CAGE_peak_31_at_GPM6A_5end | |||
|id=chr4:176828294..176828305,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.30e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!5.35e-73!32;UBERON:0001893!1.34e-68!34;UBERON:0001049!1.52e-68!57;UBERON:0005068!1.52e-68!57;UBERON:0006241!1.52e-68!57;UBERON:0007135!1.52e-68!57;UBERON:0002020!1.79e-68!34;UBERON:0003528!1.79e-68!34;UBERON:0002619!3.85e-68!22;UBERON:0002791!1.03e-63!33;UBERON:0002780!1.04e-62!41;UBERON:0001890!1.04e-62!41;UBERON:0006240!1.04e-62!41;UBERON:0003080!3.75e-61!42;UBERON:0000956!6.59e-60!25;UBERON:0000203!6.59e-60!25;UBERON:0001950!5.65e-57!20;UBERON:0002616!5.43e-56!59;UBERON:0001017!7.71e-54!82;UBERON:0005743!3.64e-51!86;UBERON:0000955!6.04e-51!69;UBERON:0006238!6.04e-51!69;UBERON:0003075!8.38e-48!86;UBERON:0007284!8.38e-48!86;UBERON:0000073!5.95e-46!94;UBERON:0001016!5.95e-46!94;UBERON:0002346!1.75e-45!90;UBERON:0003056!4.03e-41!61;UBERON:0007023!5.30e-38!115;UBERON:0000349!5.38e-32!5;UBERON:0000033!2.48e-29!123;UBERON:0001871!1.19e-28!7;UBERON:0000153!9.22e-28!129;UBERON:0007811!9.22e-28!129;UBERON:0000200!7.40e-27!6;UBERON:0004121!1.10e-23!169;UBERON:0000924!4.98e-23!173;UBERON:0006601!4.98e-23!173;UBERON:0002771!2.59e-20!3;UBERON:0002420!3.50e-17!9;UBERON:0007245!3.50e-17!9;UBERON:0010009!3.50e-17!9;UBERON:0010011!3.50e-17!9;UBERON:0000454!3.50e-17!9;UBERON:0000025!6.47e-17!194;UBERON:0000369!1.98e-14!4;UBERON:0002435!1.98e-14!4;UBERON:0000204!1.98e-14!4;UBERON:0010082!1.98e-14!4;UBERON:0001954!4.26e-14!2;UBERON:0003022!4.26e-14!2;UBERON:0002421!4.26e-14!2;UBERON:0002600!4.26e-14!2;UBERON:0001876!9.23e-14!2;UBERON:0004111!1.20e-12!241;UBERON:0001872!2.64e-12!5;UBERON:0002021!6.79e-12!5;UBERON:0002308!4.38e-11!9;UBERON:0000125!4.38e-11!9;UBERON:0000477!6.26e-11!286;UBERON:0000064!1.42e-10!219;UBERON:0003076!6.93e-10!15;UBERON:0003057!6.93e-10!15;UBERON:0000483!1.01e-09!309;UBERON:0000119!1.40e-09!312;UBERON:0002240!4.01e-09!3;UBERON:0005383!4.93e-09!3;UBERON:0005382!4.93e-09!3;UBERON:0001896!7.72e-09!3;UBERON:0005290!7.72e-09!3;UBERON:0010096!7.72e-09!3;UBERON:0009663!1.83e-08!7;UBERON:0000475!2.79e-08!365;UBERON:0002581!7.76e-08!1;UBERON:0002022!1.07e-07!1;UBERON:0001882!1.15e-07!1;UBERON:0005403!1.15e-07!1;UBERON:0003112!1.22e-07!1;UBERON:0000032!1.22e-07!1;UBERON:0005253!1.22e-07!1;UBERON:0003128!1.22e-07!1;UBERON:0002241!1.22e-07!1;UBERON:0001703!1.22e-07!1;UBERON:0004761!1.22e-07!1;UBERON:0009617!1.22e-07!1;UBERON:0007190!1.39e-07!1;UBERON:0002902!1.80e-07!1;UBERON:0009899!1.80e-07!1;UBERON:0001874!1.91e-07!1;UBERON:0002298!3.00e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.42e-54;22!UBERON:0000200;9.00e-53;6!UBERON:0000956;4.53e-48;25!UBERON:0000203;4.53e-48;25!UBERON:0001950;1.13e-45;20!UBERON:0002771;2.45e-40;2!UBERON:0001869;2.39e-33;32!UBERON:0003528;3.02e-32;34!UBERON:0002020;3.02e-32;34!UBERON:0001893;1.51e-31;34!UBERON:0002791;2.06e-31;32!UBERON:0001870;2.72e-27;3!UBERON:0001871;4.86e-26;6!UBERON:0002780;1.20e-25;41!UBERON:0001890;1.20e-25;41!UBERON:0002581;4.22e-21;1!UBERON:0001872;8.13e-17;5!UBERON:0000349;8.13e-17;5!UBERON:0000073;1.11e-16;53!UBERON:0002616;1.11e-16;53!UBERON:0000955;2.28e-15;68!UBERON:0001017;1.35e-12;75!UBERON:0000007;1.82e-11;2!UBERON:0001876;3.02e-11;2!UBERON:0001954;3.02e-11;2!UBERON:0002702;3.02e-11;2!UBERON:0003022;3.02e-11;2!UBERON:0002421;3.02e-11;2!UBERON:0002600;3.02e-11;2!UBERON:0001016;7.39e-09;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.60e-54,22;UBERON:0000200,2.63e-52,6;UBERON:0000956,4.84e-48,25;UBERON:0000203,4.84e-48,25;UBERON:0001950,1.48e-45,20;UBERON:0002771,5.49e-40,2;UBERON:0002791,7.74e-38,32;UBERON:0001869,7.74e-38,32;UBERON:0002780,1.18e-37,41;UBERON:0001890,1.18e-37,41;UBERON:0003080,1.18e-37,41;UBERON:0006240,1.18e-37,41;UBERON:0003528,1.14e-35,34;UBERON:0002020,1.14e-35,34;UBERON:0001893,1.14e-35,34;UBERON:0000073,3.04e-29,53;UBERON:0002616,3.04e-29,53;UBERON:0000955,7.98e-28,68;UBERON:0006238,7.98e-28,68;UBERON:0001049,1.08e-27,56;UBERON:0005068,1.08e-27,56;UBERON:0006241,1.08e-27,56;UBERON:0007135,1.08e-27,56;UBERON:0001870,3.56e-27,3;UBERON:0001871,4.87e-26,6;UBERON:0003056,1.94e-25,61;UBERON:0001017,2.01e-23,81;UBERON:0001016,4.23e-21,89;UBERON:0002581,9.43e-21,1;UBERON:0003075,6.28e-19,82;UBERON:0007284,6.28e-19,82;UBERON:0002346,4.83e-18,86;UBERON:0000349,4.64e-17,5;UBERON:0001872,9.55e-17,5;UBERON:0010371,6.92e-15,104;UBERON:0007023,1.10e-13,114;UBERON:0010314,1.16e-11,132;UBERON:0000007,1.82e-11,2;UBERON:0001876,2.02e-11,2;UBERON:0001954,2.23e-11,2;UBERON:0003022,2.23e-11,2;UBERON:0002421,2.23e-11,2;UBERON:0002600,2.23e-11,2;UBERON:0002702,3.02e-11,2;UBERON:0004121,5.90e-11,171;UBERON:0000924,5.90e-11,171;UBERON:0006601,5.90e-11,171;UBERON:0011216,2.87e-08,223;UBERON:0000025,7.08e-08,192 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76259386507517,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58276989889697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,1.90684768556206,0,0,0,0.2249738915515,0,0.728994679896296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58634144372552,1.6274820991845,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52084279766904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706521476061055,0,0.798169295285756,0.615349092722265,0,0.414943514785307,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607838261565552,0,1.86018116851066,0.760989722326882,0,0,0,0,0,0,0,0,3.41493287026946,0,0,0,0,1.18390992413128,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.815897882290976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76259386507517,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58276989889697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,1.90684768556206,0,0,0,0.2249738915515,0,0.728994679896296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58634144372552,1.6274820991845,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52084279766904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706521476061055,0,0.798169295285756,0.615349092722265,0,0.414943514785307,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607838261565552,0,1.86018116851066,0.760989722326882,0,0,0,0,0,0,0,0,3.41493287026946,0,0,0,0,1.18390992413128,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.815897882290976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p31@GPM6A | |||
}} | }} |
Latest revision as of 22:05, 16 September 2015
Short description: | p31@GPM6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_31_at_GPM6A_5end |
Coexpression cluster: | C4395_putamen_pituitary_frontal_caudate_amygdala_nucleus_cerebral |
Association with transcript: | 13bp_to_ENST00000513365_5end |
EntrezGene: | GPM6A |
HGNC: | 4460 |
UniProt: | D6R9T7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data