FFCP PHASE1:Hg19::chr4:177713999..177714050,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7424 | |EntrezGene=7424 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12682 | |HGNC=12682 | ||
|TSSclassifier=strong | |||
|UniProt=P49767 | |UniProt=P49767 | ||
|association_with_transcript=-104bp_to_NM_005429,uc003ius.1_5end | |association_with_transcript=-104bp_to_NM_005429,uc003ius.1_5end | ||
|cluster_id=chr4:177713999..177714050,- | |||
|description=CAGE_peak_2_at_VEGFC_5end | |description=CAGE_peak_2_at_VEGFC_5end | ||
|id=chr4:177713999..177714050,- | |id=chr4:177713999..177714050,- | ||
|ontology_enrichment_celltype=CL:0000055!1.63e-35!180;CL:0000057!1.54e-20!75;CL:0000220!5.66e-17!246;CL:0002321!9.24e-17!248;CL:0000222!1.51e-15!119;CL:0000680!4.09e-15!57;CL:0000056!4.09e-15!57;CL:0000355!4.09e-15!57;CL:0000192!6.39e-15!42;CL:0000514!6.39e-15!42;CL:0000183!3.54e-14!59;CL:0000187!1.04e-13!54;CL:0000359!4.76e-13!32;CL:0000393!1.06e-10!60;CL:0000211!1.06e-10!60;CL:0002371!7.21e-09!591;CL:0000548!3.76e-08!679;CL:0000004!3.76e-08!679;CL:0000255!3.76e-08!679;CL:0002620!6.28e-08!23;CL:0000144!6.75e-08!625;CL:0000012!1.08e-07!682;CL:0002334!2.33e-07!12 | |ontology_enrichment_celltype=CL:0000055!1.63e-35!180;CL:0000057!1.54e-20!75;CL:0000220!5.66e-17!246;CL:0002321!9.24e-17!248;CL:0000222!1.51e-15!119;CL:0000680!4.09e-15!57;CL:0000056!4.09e-15!57;CL:0000355!4.09e-15!57;CL:0000192!6.39e-15!42;CL:0000514!6.39e-15!42;CL:0000183!3.54e-14!59;CL:0000187!1.04e-13!54;CL:0000359!4.76e-13!32;CL:0000393!1.06e-10!60;CL:0000211!1.06e-10!60;CL:0002371!7.21e-09!591;CL:0000548!3.76e-08!679;CL:0000004!3.76e-08!679;CL:0000255!3.76e-08!679;CL:0002620!6.28e-08!23;CL:0000144!6.75e-08!625;CL:0000012!1.08e-07!682;CL:0002334!2.33e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.94e-13;32!CL:0000192;4.14e-12;43!CL:0000057;3.44e-09;73!CL:0000187;3.49e-08;55!CL:0002620;7.47e-08;23!CL:0002334;1.12e-07;12!CL:0002320;2.35e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.43e-22,76;CL:0002321,2.44e-17,250;CL:0000222,1.18e-16,121;CL:0000680,1.22e-16,58;CL:0000056,1.22e-16,58;CL:0000355,1.22e-16,58;CL:0000192,2.56e-16,43;CL:0000514,2.56e-16,43;CL:0000187,4.02e-15,55;CL:0000359,6.65e-14,32;CL:0000393,1.61e-11,61;CL:0000211,1.61e-11,61;CL:0002620,4.79e-08,23;CL:0002334,8.58e-08,12 | |||
|ontology_enrichment_development_v019=CL:0000514;4.14e-12;43!CL:0000355;5.44e-09;58 | |||
|ontology_enrichment_disease=DOID:2394!9.64e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.59e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.80e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000486!2.10e-20!82;UBERON:0000475!2.33e-20!365;UBERON:0000914!5.00e-20!83;UBERON:0002329!5.00e-20!83;UBERON:0003077!5.00e-20!83;UBERON:0003059!5.00e-20!83;UBERON:0007282!5.00e-20!83;UBERON:0009618!5.00e-20!83;UBERON:0007285!5.00e-20!83;UBERON:0002100!3.31e-19!216;UBERON:0005256!1.56e-17!143;UBERON:0003102!1.58e-17!95;UBERON:0004290!1.32e-16!70;UBERON:0001134!1.12e-13!61;UBERON:0002036!1.12e-13!61;UBERON:0003082!1.12e-13!61;UBERON:0002385!2.50e-13!63;UBERON:0001015!2.50e-13!63;UBERON:0000383!2.50e-13!63;UBERON:0002049!2.90e-13!79;UBERON:0007798!2.90e-13!79;UBERON:0001637!3.38e-13!42;UBERON:0003509!3.38e-13!42;UBERON:0004572!3.38e-13!42;UBERON:0001981!4.56e-13!60;UBERON:0007500!4.56e-13!60;UBERON:0004537!4.56e-13!60;UBERON:0006965!4.56e-13!60;UBERON:0000055!4.70e-13!69;UBERON:0004872!5.34e-13!84;UBERON:0000483!7.89e-13!309;UBERON:0000119!8.24e-13!312;UBERON:0000481!8.44e-13!347;UBERON:0000490!1.62e-12!138;UBERON:0003104!1.92e-12!238;UBERON:0009142!1.92e-12!238;UBERON:0000468!9.47e-12!659;UBERON:0003914!8.78e-11!118;UBERON:0004573!3.06e-10!33;UBERON:0004571!3.06e-10!33;UBERON:0002199!8.69e-10!45;UBERON:0002416!8.69e-10!45;UBERON:0000467!1.12e-09!625;UBERON:0000477!1.31e-09!286;UBERON:0000480!1.82e-09!626;UBERON:0002097!8.70e-09!40;UBERON:0004535!1.86e-08!110;UBERON:0001009!2.39e-08!113;UBERON:0004111!6.52e-08!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.28e-09;42!UBERON:0003509;2.28e-09;42!UBERON:0004572;2.28e-09;42!UBERON:0004573;2.50e-09;33!UBERON:0004571;2.50e-09;33!UBERON:0002384;2.16e-07;198!UBERON:0007500;3.11e-07;56!UBERON:0001981;3.11e-07;56!UBERON:0004537;3.11e-07;56!UBERON:0003102;4.82e-07;50!UBERON:0002097;9.28e-07;41 | |||
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|phase1_expression=8.90224058425727,12.846031433459,6.62485699251064,7.00513088471913,8.04529969969118,6.10636966870258,2.53299878168311,1.89515962028049,6.52964070499596,7.12628415854376,5.58240934377942,0.218441372130172,1.31883489114227,7.30221482464275,5.63375538737457,4.70627602516243,3.01347264011988,2.92124036154949,3.41552959153355,1.84681587115182,3.67201244239655,2.5076377718247,0.85870796139317,0.821246550437305,1.63205431473244,0,0,0,0,0,0,3.67768489791571,6.92773613189975,7.02532619316897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,1.2786256184353,5.78302643815306,3.00802746381534,6.80778639115871,4.7717156823066,23.8451086448292,1.03988298880475,1.33037638477538,2.28370442802128,1.37528029272598,10.5645633604837,2.96627554227544,0,0,0,0,0,0,1.59009925893364,4.30117297553062,2.42998351125316,3.39184765154406,4.19499436209906,4.40188867104108,3.76190939766259,1.55050055501597,1.42306505074684,2.34304428935269,0.402829317109147,0.760272105718513,1.46437234528902,2.94130464276695,5.67099363517232,3.30408994651095,3.59246996201872,5.29273958271614,4.5994991239765,8.54339093611316,2.19842092716489,0,0,6.54141078213801,20.3758500195081,7.34456967654563,5.29636723252875,6.88407889797153,7.09336764396714,3.36406560085384,5.33744978648525,11.3467072271894,2.8008993185979,4.58016285036939,1.30769522490767,0.756787138224657,0,5.38939293217732,6.24320153660641,1.71141546463335,11.6569970830405,7.16350441726966,5.82742599725274,5.89893388149444,3.87892925384297,7.00155608677077,5.6829179646671,14.2560342873846,19.7813543422846,15.4727431529464,14.3723628363248,5.72342787443825,5.75545191411035,7.75779523355712,9.65750765937843,8.88814607817157,14.7233297728465,4.3104229600808,6.99619579186562,11.9592137738398,12.7159140695737,8.40255069036326,7.9350447513598,4.12224864073007,9.67807652924267,7.08860595413318,7.50264939741229,5.3011092591264,13.531335100418,3.87950536365149,11.005297368015,6.64963848302426,7.96934783859292,6.3776081543888,12.8190676677692,7.4569194801141,0.609868530647977,0.530119073285941,0.464775771478074,1.34759371519982,0.252320850875628,0,12.5159625863853,15.4377825166292,8.28809528114883,2.3218396401599,3.60939740834793,0.236613600079688,0.168584690078102,1.44606617930089,0.330881918197182,1.08939722046203,0.949082476444386,0.674156540800822,0.588664395376038,1.15424147083917,0,7.01208869017229,4.9388881359768,10.2906097969879,0,0,1.77236972004421,0,0,1.88724591328378,2.63400684980701,8.99214026060957,10.5555421032212,11.3883787544991,4.56131627434455,8.31947828223663,2.88662684050547,0.579652024875384,2.81780866165972,3.3204282985047,1.38895653772983,2.28304982681518,1.58040879591855,0.858486162094873,0,0,0.148631162288728,10.3107217385455,9.23901705093727,5.52922879245307,8.32894261136489,5.52204483176528,7.28427090413901,0,0.088048434013226,0,0,0.12624243342638,1.26995788584338,1.14596527667483,1.17217447210047,3.4214489204541,0.514137463516618,0,0.285826432630578,1.56983518083505,0.43596006883328,2.4935017179123,11.1173675551689,14.3062578340753,5.071816515336,6.91439103120663,4.16029747645464,4.37252536245642,5.67396528093113,8.79193190753128,6.14805372730035,3.25572963234866,0.823240336780769,6.18898750158097,3.909311436168,2.37585561880029,7.23454504943007,9.58686804460323,6.69819040919782,0,0,0,4.55287225434007,1.14861935834114,2.85273810081437,8.83165970672233,10.0683398049688,11.997084537073,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,8.58840442033979,9.50323990013386,2.44138521329762,2.9115920614313,5.53129865271201,3.46945313074656,8.31704046448264,9.02838299183157,11.3703752027992,5.17365356462525,11.2918351751024,12.7214726293775,11.7292879531912,3.52442083432933,1.71571711905428,0,0,0,0.303127571446259,0,3.0239029332968,11.6610669674825,8.90079445070762,16.5589455715513,8.71346214938766,9.72243773226737,17.8547852469404,7.42090332224955,10.0236300971726,9.76589489222199,8.45909706942234,11.9428518712233,7.55367459989735,0,16.0405176242628,9.48434186039732,5.85553685639494,7.64782905628212,4.98272776845812,5.41439535488894,2.77255213575893,2.35304930753057,0,3.9054102690364,1.13733384070897,2.04112446331819,5.39789790255348,7.71136263451447,6.50271450105247,8.02703638167765,0.254876273045038,0,1.56712328305525,0,0,1.02580050046556,3.93617574839647,0,2.06082023295445,4.67004270573551,3.05285149706176,10.9110452219273,2.60024098414608,16.068392984416,6.18692597069581,2.31072925671967,2.45605879561807,3.85942402956686,2.47066563197029,2.46528379654188,4.68746450788555,2.8490251406956,8.42953068340988,10.1860735703506,12.1232076869855,10.9250403323994,12.0859842817294,7.870308670766,11.1525963225696,10.473141725987,8.51689648507235,8.69932992075073,9.82218361250776,4.15062171551775,3.72158369359667,3.16379424718726,11.2471814415057,6.14154699147201,8.13084077264449,14.3191461566672,10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| ||
|short_description=p2@VEGFC | |short_description=p2@VEGFC | ||
}} | }} |
Latest revision as of 22:37, 16 September 2015
Short description: | p2@VEGFC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_VEGFC_5end |
Coexpression cluster: | NA |
Association with transcript: | -104bp_to_NM_005429, uc003ius.1_5end |
EntrezGene: | VEGFC |
HGNC: | 12682 |
UniProt: | P49767 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.43e-22 | 76 |
embryonic cell | 2.44e-17 | 250 |
mesodermal cell | 1.18e-16 | 121 |
muscle precursor cell | 1.22e-16 | 58 |
myoblast | 1.22e-16 | 58 |
multi-potent skeletal muscle stem cell | 1.22e-16 | 58 |
smooth muscle cell | 2.56e-16 | 43 |
smooth muscle myoblast | 2.56e-16 | 43 |
muscle cell | 4.02e-15 | 55 |
vascular associated smooth muscle cell | 6.65e-14 | 32 |
electrically responsive cell | 1.61e-11 | 61 |
electrically active cell | 1.61e-11 | 61 |
skin fibroblast | 4.79e-08 | 23 |
preadipocyte | 8.58e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.80e-07 | 14 |