FFCP PHASE1:Hg19::chr11:17555415..17555420,-: Difference between revisions
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|id=chr11:17555415..17555420,-
|short_description=p11@USH1C
|description=CAGE_peak_11_at_USH1C_5end
|association_with_transcript=0bp_to_ENST00000526181_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10083 | |EntrezGene=10083 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12597 | |HGNC=12597 | ||
|TSSclassifier=strong | |||
|UniProt=E9PNW1 | |UniProt=E9PNW1 | ||
|association_with_transcript=0bp_to_ENST00000526181_5end | |||
|cluster_id=chr11:17555415..17555420,- | |||
|coexpression_cluster_id=C137 | |||
|description=CAGE_peak_11_at_USH1C_5end | |||
|id=chr11:17555415..17555420,- | |||
|ontology_enrichment_celltype=CL:0002150!2.93e-40!3;CL:0000861!2.93e-40!3;CL:0000235!1.44e-12!10;CL:0000082!5.87e-07!19 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1324!1.11e-08!15;DOID:0050615!3.60e-08!16 | |||
|ontology_enrichment_disease_v019=DOID:4556;4.27e-34;3!DOID:3908;4.21e-21;5!DOID:4362;5.15e-21;5!DOID:3905;2.19e-12;9!DOID:1324;5.55e-08;15!DOID:0050615;1.45e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,4.27e-34,3;DOID:3908,4.21e-21,5;DOID:4362,5.15e-21,5;DOID:3905,2.19e-12,9;DOID:1324,5.55e-08,15;DOID:0050615,1.45e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0001896!1.24e-18!3;UBERON:0005290!1.24e-18!3;UBERON:0010096!1.24e-18!3;UBERON:0002363!2.11e-14!1;UBERON:0007647!2.11e-14!1;UBERON:0010115!2.11e-14!1;UBERON:0004733!1.79e-10!12;UBERON:0002028!1.79e-10!12;UBERON:0007277!1.79e-10!12;UBERON:0004732!1.04e-09!13;UBERON:0003076!1.73e-08!15;UBERON:0003057!1.73e-08!15;UBERON:0002360!7.52e-08!2;UBERON:0000094!7.52e-08!2;UBERON:0007645!7.52e-08!2;UBERON:0002298!1.45e-07!8;UBERON:0004802!5.87e-07!19;UBERON:0000115!5.87e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0000002;9.07e-18;6!UBERON:0001560;9.07e-18;6!UBERON:0000995;3.58e-07;17!UBERON:0003975;7.60e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,9.07e-18,6;UBERON:0001560,9.07e-18,6 | |||
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|short_description=p11@USH1C | |||
}} | }} |
Latest revision as of 00:28, 17 September 2015
Short description: | p11@USH1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_USH1C_5end |
Coexpression cluster: | C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic |
Association with transcript: | 0bp_to_ENST00000526181_5end |
EntrezGene: | USH1C |
HGNC: | 12597 |
UniProt: | E9PNW1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterine cervix | 9.07e-18 | 6 |
neck of organ | 9.07e-18 | 6 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 4.27e-34 | 3 |
non-small cell lung carcinoma | 4.21e-21 | 5 |
cervical cancer | 5.15e-21 | 5 |
lung carcinoma | 2.19e-12 | 9 |
lung cancer | 5.55e-08 | 15 |
respiratory system cancer | 1.45e-07 | 16 |