FFCP PHASE1:Hg19::chr17:67114473..67114480,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:67114473..67114480,-
|short_description=p5@ABCA6
|description=CAGE_peak_5_at_ABCA6_5end
|association_with_transcript=-344bp_to_uc002jhx.1_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23460 | |EntrezGene=23460 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=36 | |HGNC=36 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-344bp_to_uc002jhx.1_5end | |||
|cluster_id=chr17:67114473..67114480,- | |||
|coexpression_cluster_id=C3669 | |||
|description=CAGE_peak_5_at_ABCA6_5end | |||
|id=chr17:67114473..67114480,- | |||
|ontology_enrichment_celltype=CL:0002087!6.17e-33!119;CL:0002031!2.79e-31!124;CL:0002057!3.67e-31!42;CL:0000738!1.05e-30!140;CL:0000860!8.97e-29!45;CL:0002009!4.33e-28!65;CL:0000557!9.36e-28!71;CL:0002194!1.81e-26!63;CL:0000576!1.81e-26!63;CL:0000040!1.81e-26!63;CL:0000559!1.81e-26!63;CL:0000839!1.02e-25!70;CL:0000037!4.50e-25!172;CL:0000566!4.50e-25!172;CL:0002032!8.10e-25!165;CL:0000837!8.10e-25!165;CL:0000766!2.85e-23!76;CL:0000988!3.04e-23!182;CL:0000763!4.46e-17!112;CL:0000049!4.46e-17!112;CL:0000945!5.81e-13!24;CL:0000826!5.81e-13!24;CL:0000840!4.21e-12!5;CL:0001029!4.21e-12!5;CL:0000990!4.53e-08!8;CL:0000134!8.74e-08!358;CL:0000542!1.55e-07!53;CL:0000051!1.55e-07!53;CL:0002320!1.76e-07!365;CL:0002393!2.57e-07!9;CL:0002397!2.57e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000840;7.32e-17;5!CL:0000945;2.37e-15;24!CL:0000860;2.92e-13;33!CL:0002057;2.92e-13;33!CL:0000990;1.96e-11;8!CL:0000451;1.89e-09;10!CL:0000473;2.61e-09;39!CL:0000234;2.61e-09;39!CL:0002087;1.28e-08;104!CL:0000576;2.27e-08;48!CL:0000738;1.22e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,7.35e-27,115;CL:0002031,1.05e-22,120;CL:0000738,2.18e-22,136;CL:0002194,1.43e-19,59;CL:0000576,1.43e-19,59;CL:0000040,1.43e-19,59;CL:0000559,1.43e-19,59;CL:0002009,6.84e-19,61;CL:0002032,1.44e-18,161;CL:0000837,1.44e-18,161;CL:0000037,1.06e-17,168;CL:0000839,2.29e-17,66;CL:0000557,4.34e-17,67;CL:0000840,6.94e-17,5;CL:0001029,6.94e-17,5;CL:0000988,1.10e-16,177;CL:0000766,8.19e-16,72;CL:0000945,2.28e-15,24;CL:0000826,2.28e-15,24;CL:0000860,6.77e-15,42;CL:0002057,6.77e-15,42;CL:0000473,6.35e-13,48;CL:0000234,6.35e-13,48;CL:0000990,1.90e-11,8;CL:0000763,4.56e-10,108;CL:0000049,4.56e-10,108;CL:0000451,1.84e-09,10;CL:0000542,5.13e-09,53;CL:0000051,5.13e-09,53;CL:0000134,4.36e-07,354;CL:0002320,6.75e-07,361;CL:0000838,7.09e-07,52 | |||
|ontology_enrichment_development_v019=CL:0002057;1.26e-11;42 | |||
|ontology_enrichment_disease=DOID:0060058!1.60e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:12603;1.39e-11;1!DOID:0060058;4.66e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,1.19e-11,1;DOID:0060058,4.81e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.97e-27!102;UBERON:0003061!3.97e-27!102;UBERON:0002193!5.27e-26!112;UBERON:0002371!5.15e-24!80;UBERON:0001474!5.94e-22!86;UBERON:0002405!1.89e-21!115;UBERON:0004765!7.24e-18!101;UBERON:0001434!7.24e-18!101;UBERON:0003081!3.63e-11!216;UBERON:0002204!1.27e-09!167;UBERON:0000007!2.14e-09!2;UBERON:0002384!4.55e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.54e-15,76;UBERON:0002405,2.33e-14,93;UBERON:0001474,1.02e-13,82;UBERON:0002390,1.52e-13,98;UBERON:0003061,1.52e-13,98;UBERON:0004765,2.25e-12,90;UBERON:0002193,3.86e-12,108;UBERON:0001434,5.43e-11,100 | |||
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| ||
|short_description=p5@ABCA6 | |||
}} | }} |
Latest revision as of 00:58, 17 September 2015
Short description: | p5@ABCA6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ABCA6_5end |
Coexpression cluster: | C3669_B_Dendritic_splenic_adult_xeroderma_hereditary_b |
Association with transcript: | -344bp_to_uc002jhx.1_5end |
EntrezGene: | ABCA6 |
HGNC: | 36 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.54e-15 | 76 |
immune system | 2.33e-14 | 93 |
bone element | 1.02e-13 | 82 |
hematopoietic system | 1.52e-13 | 98 |
blood island | 1.52e-13 | 98 |
skeletal element | 2.25e-12 | 90 |
hemolymphoid system | 3.86e-12 | 108 |
skeletal system | 5.43e-11 | 100 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 1.19e-11 | 1 |
lymphoma | 4.81e-10 | 10 |