FFCP PHASE1:Hg19::chr11:1778628..1778664,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:1778628..1778664,-
|short_description=p3@CTSD
|description=CAGE_peak_3_at_CTSD_5end
|association_with_transcript=64bp_to_BC001574_5end
|EntrezGene=1509
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1509 | |EntrezGene=1509 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2529 | |HGNC=2529 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=64bp_to_BC001574_5end | |||
|cluster_id=chr11:1778628..1778664,- | |||
|coexpression_cluster_id=C587 | |||
|description=CAGE_peak_3_at_CTSD_5end | |||
|id=chr11:1778628..1778664,- | |||
|ontology_enrichment_celltype=CL:0000766!3.51e-13!76;CL:0000839!5.95e-13!70;CL:0000557!2.97e-12!71;CL:0002194!3.71e-11!63;CL:0000576!3.71e-11!63;CL:0000040!3.71e-11!63;CL:0000559!3.71e-11!63;CL:0002057!5.03e-10!42;CL:0002009!7.53e-10!65;CL:0000860!5.71e-09!45 | |||
|ontology_enrichment_celltype_v019=CL:0000473;8.45e-13;39!CL:0000234;8.45e-13;39!CL:0000860;2.49e-11;33!CL:0002057;2.49e-11;33!CL:0000576;7.65e-08;48!CL:0000766;2.81e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.26e-17,72;CL:0000557,2.05e-16,67;CL:0000839,2.09e-16,66;CL:0000473,1.84e-14,48;CL:0000234,1.84e-14,48;CL:0002194,2.06e-14,59;CL:0000576,2.06e-14,59;CL:0000040,2.06e-14,59;CL:0000559,2.06e-14,59;CL:0002009,2.53e-13,61;CL:0000860,1.49e-10,42;CL:0002057,1.49e-10,42;CL:0002320,6.21e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;7.54e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!3.65e-12!115;UBERON:0002371!2.92e-11!80;UBERON:0000926!1.61e-10!448;UBERON:0004120!1.61e-10!448;UBERON:0006603!1.61e-10!448;UBERON:0001474!1.92e-10!86;UBERON:0000468!1.88e-09!659;UBERON:0002193!2.12e-09!112;UBERON:0004765!3.40e-09!101;UBERON:0001434!3.40e-09!101;UBERON:0002390!3.28e-08!102;UBERON:0003061!3.28e-08!102;UBERON:0000467!4.39e-07!625;UBERON:0000480!6.38e-07!626;UBERON:0000062!7.49e-07!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.77e-15,76;UBERON:0002405,6.41e-15,93;UBERON:0001474,9.75e-14,82;UBERON:0004765,2.47e-13,90;UBERON:0000926,1.12e-12,315;UBERON:0004120,1.12e-12,315;UBERON:0006603,1.12e-12,315;UBERON:0001434,1.26e-12,100;UBERON:0002193,1.58e-11,108;UBERON:0002390,2.50e-10,98;UBERON:0003061,2.50e-10,98;UBERON:0002204,8.96e-09,167;UBERON:0003081,6.42e-08,203;UBERON:0002384,8.92e-07,371 | |||
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| ||
|short_description=p3@CTSD | |||
}} | }} |
Latest revision as of 01:12, 17 September 2015
Short description: | p3@CTSD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CTSD_5end |
Coexpression cluster: | C587_Osteoblast_Monocytederived_CD14_Macrophage_leiomyoma_Adipocyte_Dendritic |
Association with transcript: | 64bp_to_BC001574_5end |
EntrezGene: | CTSD |
HGNC: | 2529 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 8.26e-17 | 72 |
granulocyte monocyte progenitor cell | 2.05e-16 | 67 |
myeloid lineage restricted progenitor cell | 2.09e-16 | 66 |
defensive cell | 1.84e-14 | 48 |
phagocyte | 1.84e-14 | 48 |
monopoietic cell | 2.06e-14 | 59 |
monocyte | 2.06e-14 | 59 |
monoblast | 2.06e-14 | 59 |
promonocyte | 2.06e-14 | 59 |
macrophage dendritic cell progenitor | 2.53e-13 | 61 |
classical monocyte | 1.49e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.49e-10 | 42 |
connective tissue cell | 6.21e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.77e-15 | 76 |
immune system | 6.41e-15 | 93 |
bone element | 9.75e-14 | 82 |
skeletal element | 2.47e-13 | 90 |
mesoderm | 1.12e-12 | 315 |
mesoderm-derived structure | 1.12e-12 | 315 |
presumptive mesoderm | 1.12e-12 | 315 |
skeletal system | 1.26e-12 | 100 |
hemolymphoid system | 1.58e-11 | 108 |
hematopoietic system | 2.50e-10 | 98 |
blood island | 2.50e-10 | 98 |
musculoskeletal system | 8.96e-09 | 167 |
lateral plate mesoderm | 6.42e-08 | 203 |
connective tissue | 8.92e-07 | 371 |