FFCP PHASE1:Hg19::chr10:129785536..129785551,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:129785536..129785551,+
|short_description=p6@PTPRE
|description=CAGE_peak_6_at_PTPRE_5end
|association_with_transcript=0bp_to_ENST00000419012,ENST00000439...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5791 | |EntrezGene=5791 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9669 | |HGNC=9669 | ||
|UniProt=Q5VWH4, | |TSSclassifier=strong | ||
|UniProt=Q5VWH4,F5H0X4 | |||
|association_with_transcript=0bp_to_ENST00000419012,ENST00000439034,uc009yau.2,uc010qup.1_5end | |||
|cluster_id=chr10:129785536..129785551,+ | |||
|coexpression_cluster_id=C2046 | |||
|description=CAGE_peak_6_at_PTPRE_5end | |||
|id=chr10:129785536..129785551,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.65e-33!24;CL:0000115!8.49e-33!35;CL:0000071!3.26e-25!18;CL:0002546!3.26e-25!18;CL:0002078!4.07e-25!44;CL:0000213!9.28e-17!57;CL:0000215!9.28e-17!57;CL:1000413!3.13e-13!9;CL:0005020!1.30e-09!6;CL:0002138!1.30e-09!6;CL:0005022!1.30e-09!6;CL:0002543!1.51e-09!6;CL:0002544!2.20e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.61e-70;24!CL:0000115;4.67e-60;36!CL:0000071;7.16e-53;18!CL:0002078;2.94e-35;45!CL:1000413;8.93e-27;9!CL:0000213;4.87e-25;58!CL:0000215;4.87e-25;58!CL:0002138;5.96e-19;6!CL:0002543;7.95e-19;6!CL:0002544;1.93e-18;6!CL:0002144;1.76e-10;3!CL:0002188;3.11e-10;5!CL:0002618;3.65e-10;3!CL:0000076;1.04e-07;63!CL:0002545;1.33e-07;2!CL:1000746;2.73e-07;7!CL:1000612;2.73e-07;7!CL:0002262;4.79e-07;2!CL:1000398;4.79e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.70e-71,36;CL:0002139,1.68e-70,24;CL:0002078,2.03e-55,45;CL:0000071,7.43e-53,18;CL:0002546,7.43e-53,18;CL:0000213,5.05e-41,58;CL:0000215,5.05e-41,58;CL:1000413,8.83e-27,9;CL:0005020,5.98e-19,6;CL:0002138,5.98e-19,6;CL:0005022,5.98e-19,6;CL:0002543,8.33e-19,6;CL:0002544,1.87e-18,6;CL:0000222,1.55e-16,121;CL:0000076,1.52e-11,63;CL:0002144,1.76e-10,3;CL:0002188,3.08e-10,5;CL:0002618,3.77e-10,3;CL:0002545,1.33e-07,2;CL:1000746,2.71e-07,7;CL:1000612,2.71e-07,7;CL:0002262,4.65e-07,2;CL:1000398,4.65e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002546;7.16e-53;18!CL:0005022;5.96e-19;6!CL:0000222;1.98e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!3.26e-25!18;UBERON:0004638!3.26e-25!18;UBERON:0004852!3.26e-25!18;UBERON:0000487!2.34e-19!22;UBERON:0006914!8.43e-18!25;UBERON:0007023!2.81e-15!115;UBERON:0003915!3.13e-13!9;UBERON:0004700!3.13e-13!9;UBERON:0001917!3.13e-13!9;UBERON:0000055!3.36e-13!69;UBERON:0004872!2.96e-12!84;UBERON:0001009!5.62e-12!113;UBERON:0002049!1.35e-11!79;UBERON:0007798!1.35e-11!79;UBERON:0004111!2.59e-11!241;UBERON:0000025!2.27e-10!194;UBERON:0000477!2.34e-10!286;UBERON:0004535!2.62e-10!110;UBERON:0003914!7.24e-10!118;UBERON:0001981!1.65e-09!60;UBERON:0007500!1.65e-09!60;UBERON:0004537!1.65e-09!60;UBERON:0006965!1.65e-09!60;UBERON:0002465!6.62e-09!10;UBERON:0000468!7.84e-08!659;UBERON:0001638!8.86e-08!9;UBERON:0003920!8.86e-08!9;UBERON:0004582!8.86e-08!9;UBERON:0000467!1.30e-07!625;UBERON:0000480!1.53e-07!626;UBERON:0003081!2.10e-07!216;UBERON:0001473!7.41e-07!8;UBERON:0004536!7.41e-07!8;UBERON:0006558!7.41e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.16e-53;18!UBERON:0001986;7.16e-53;18!UBERON:0004852;7.16e-53;18!UBERON:0000487;2.62e-42;22!UBERON:0006914;1.32e-36;25!UBERON:0003915;8.93e-27;9!UBERON:0004700;8.93e-27;9!UBERON:0001917;8.93e-27;9!UBERON:0000490;2.40e-24;33!UBERON:0000055;7.71e-19;65!UBERON:0001638;4.10e-16;9!UBERON:0003920;4.10e-16;9!UBERON:0004582;4.10e-16;9!UBERON:0002465;1.18e-14;10!UBERON:0001473;5.26e-14;8!UBERON:0004536;5.26e-14;8!UBERON:0006558;5.26e-14;8!UBERON:0007500;6.91e-14;56!UBERON:0001981;6.91e-14;56!UBERON:0004537;6.91e-14;56!UBERON:0002049;1.61e-12;75!UBERON:0007798;1.61e-12;75!UBERON:0003914;1.71e-10;74!UBERON:0010523;1.76e-10;3!UBERON:0001915;1.76e-10;3!UBERON:0001982;1.76e-10;3!UBERON:0001009;1.09e-09;112!UBERON:0000025;5.09e-08;93!UBERON:0000947;6.29e-08;21!UBERON:0010191;6.29e-08;21!UBERON:0004535;9.92e-08;109!UBERON:0005800;1.33e-07;2!UBERON:0001515;1.33e-07;2!UBERON:0002405;2.01e-07;27!UBERON:0000074;2.73e-07;7!UBERON:0001229;2.73e-07;7!UBERON:0001281;4.79e-07;2!UBERON:0003497;4.79e-07;2!UBERON:0003909;4.79e-07;2!UBERON:0003835;4.79e-07;2!UBERON:0002133;6.54e-07;2!UBERON:0000353;8.68e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,7.43e-53,18;UBERON:0001986,7.43e-53,18;UBERON:0004852,7.43e-53,18;UBERON:0000487,2.70e-42,22;UBERON:0006914,1.35e-36,25;UBERON:0000055,1.65e-35,68;UBERON:0002049,7.98e-30,78;UBERON:0007798,7.98e-30,78;UBERON:0003915,8.83e-27,9;UBERON:0004700,8.83e-27,9;UBERON:0001917,8.83e-27,9;UBERON:0007500,8.25e-26,59;UBERON:0001981,8.25e-26,59;UBERON:0004537,8.25e-26,59;UBERON:0006965,8.25e-26,59;UBERON:0001009,5.98e-24,112;UBERON:0004872,1.10e-22,83;UBERON:0004535,9.39e-22,109;UBERON:0003914,3.19e-19,117;UBERON:0001638,5.28e-16,9;UBERON:0003920,5.28e-16,9;UBERON:0004582,5.28e-16,9;UBERON:0002465,1.15e-14,10;UBERON:0001473,5.27e-14,8;UBERON:0004536,5.27e-14,8;UBERON:0006558,5.27e-14,8;UBERON:0004111,2.31e-11,240;UBERON:0003081,3.93e-11,203;UBERON:0003887,4.60e-11,12;UBERON:0000025,1.07e-10,192;UBERON:0010523,1.76e-10,3;UBERON:0001915,1.76e-10,3;UBERON:0001982,1.76e-10,3;UBERON:0005103,2.74e-09,8;UBERON:0000083,2.74e-09,8;UBERON:0009201,2.74e-09,8;UBERON:0006553,2.74e-09,8;UBERON:0003074,2.74e-09,8;UBERON:0003060,2.74e-09,8;UBERON:0000080,3.28e-08,9;UBERON:0002120,3.28e-08,9;UBERON:0004875,3.28e-08,9;UBERON:0005721,3.28e-08,9;UBERON:0005754,3.28e-08,9;UBERON:0007297,3.28e-08,9;UBERON:0000947,6.39e-08,21;UBERON:0010191,6.39e-08,21;UBERON:0005800,1.33e-07,2;UBERON:0001515,1.33e-07,2;UBERON:0010532,2.71e-07,7;UBERON:0000074,2.71e-07,7;UBERON:0001229,2.71e-07,7;UBERON:0001230,2.71e-07,7;UBERON:0003220,2.71e-07,7;UBERON:0005749,2.71e-07,7;UBERON:0004199,2.71e-07,7;UBERON:0004209,2.71e-07,7;UBERON:0004198,2.71e-07,7;UBERON:0000490,4.05e-07,148;UBERON:0001281,4.65e-07,2;UBERON:0003497,4.65e-07,2;UBERON:0003909,4.65e-07,2;UBERON:0003835,4.65e-07,2;UBERON:0002133,6.64e-07,2;UBERON:0000058,7.84e-07,19;UBERON:0000353,8.55e-07,15 | |||
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| ||
|short_description=p6@PTPRE | |||
}} | }} |
Latest revision as of 01:42, 17 September 2015
Short description: | p6@PTPRE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PTPRE_5end |
Coexpression cluster: | C2046_Lymphatic_Endothelial_Neutrophils_Renal_heart_Fibroblast_Hepatic |
Association with transcript: | 0bp_to_ENST00000419012, ENST00000439034, uc009yau.2, uc010qup.1_5end |
EntrezGene: | PTPRE |
HGNC: | 9669 |
UniProt: | Q5VWH4F5H0X4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.70e-71 | 36 |
endothelial cell of vascular tree | 1.68e-70 | 24 |
meso-epithelial cell | 2.03e-55 | 45 |
blood vessel endothelial cell | 7.43e-53 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.43e-53 | 18 |
lining cell | 5.05e-41 | 58 |
barrier cell | 5.05e-41 | 58 |
endothelial cell of artery | 8.83e-27 | 9 |
lymphangioblast | 5.98e-19 | 6 |
endothelial cell of lymphatic vessel | 5.98e-19 | 6 |
vascular lymphangioblast | 5.98e-19 | 6 |
vein endothelial cell | 8.33e-19 | 6 |
aortic endothelial cell | 1.87e-18 | 6 |
mesodermal cell | 1.55e-16 | 121 |
squamous epithelial cell | 1.52e-11 | 63 |
capillary endothelial cell | 1.76e-10 | 3 |
glomerular endothelial cell | 3.08e-10 | 5 |
endothelial cell of umbilical vein | 3.77e-10 | 3 |
thoracic aorta endothelial cell | 1.33e-07 | 2 |
glomerular cell | 2.71e-07 | 7 |
kidney corpuscule cell | 2.71e-07 | 7 |
endothelial cell of sinusoid | 4.65e-07 | 2 |
endothelial cell of hepatic sinusoid | 4.65e-07 | 2 |