FFCP PHASE1:Hg19::chr10:129785574..129785580,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5791 | |EntrezGene=5791 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9669 | |HGNC=9669 | ||
|TSSclassifier=strong | |||
|UniProt=B4DRZ3 | |UniProt=B4DRZ3 | ||
|association_with_transcript=0bp_to_ENST00000430713_5end | |association_with_transcript=0bp_to_ENST00000430713_5end | ||
|cluster_id=chr10:129785574..129785580,+ | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_14_at_PTPRE_5end | |description=CAGE_peak_14_at_PTPRE_5end | ||
|id=chr10:129785574..129785580,+ | |id=chr10:129785574..129785580,+ | ||
|ontology_enrichment_celltype=CL:0002139!3.49e-70!24;CL:0000115!5.40e-59!35;CL:0000071!6.39e-53!18;CL:0002546!6.39e-53!18;CL:0002078!2.75e-45!44;CL:0000213!3.75e-33!57;CL:0000215!3.75e-33!57;CL:1000413!4.06e-27!9;CL:0002543!1.09e-18!6;CL:0005020!1.43e-18!6;CL:0002138!1.43e-18!6;CL:0005022!1.43e-18!6;CL:0002544!2.52e-18!6;CL:0000222!5.52e-12!119;CL:0000076!8.04e-12!62;CL:0002144!2.54e-10!3;CL:0002618!5.41e-10!3;CL:0002545!1.93e-07!2 | |ontology_enrichment_celltype=CL:0002139!3.49e-70!24;CL:0000115!5.40e-59!35;CL:0000071!6.39e-53!18;CL:0002546!6.39e-53!18;CL:0002078!2.75e-45!44;CL:0000213!3.75e-33!57;CL:0000215!3.75e-33!57;CL:1000413!4.06e-27!9;CL:0002543!1.09e-18!6;CL:0005020!1.43e-18!6;CL:0002138!1.43e-18!6;CL:0005022!1.43e-18!6;CL:0002544!2.52e-18!6;CL:0000222!5.52e-12!119;CL:0000076!8.04e-12!62;CL:0002144!2.54e-10!3;CL:0002618!5.41e-10!3;CL:0002545!1.93e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.00e-121;24!CL:0000115;8.66e-94;36!CL:0000071;3.02e-88;18!CL:0002078;1.08e-56;45!CL:1000413;9.12e-45;9!CL:0000213;8.35e-40;58!CL:0000215;8.35e-40;58!CL:0002138;1.92e-34;6!CL:0002543;2.21e-34;6!CL:0002544;2.71e-22;6!CL:0002545;1.52e-17;2!CL:0000076;3.86e-16;63!CL:0002144;1.91e-12;3!CL:0002618;9.17e-12;3!CL:0002188;1.48e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,7.00e-122,24;CL:0000115,1.97e-108,36;CL:0000071,2.05e-88,18;CL:0002546,2.05e-88,18;CL:0002078,3.98e-86,45;CL:0000213,4.08e-66,58;CL:0000215,4.08e-66,58;CL:1000413,8.86e-45,9;CL:0002543,1.51e-34,6;CL:0005020,1.99e-34,6;CL:0002138,1.99e-34,6;CL:0005022,1.99e-34,6;CL:0000222,5.56e-30,121;CL:0000076,1.34e-23,63;CL:0002544,2.57e-22,6;CL:0002545,9.58e-18,2;CL:0002321,1.41e-12,250;CL:0000066,1.64e-12,253;CL:0002144,1.92e-12,3;CL:0002618,6.96e-12,3;CL:0002188,1.61e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;3.02e-88;18!CL:0005022;1.92e-34;6!CL:0000222;3.25e-11;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:6193;7.82e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,1.25e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001986!6.39e-53!18;UBERON:0004638!6.39e-53!18;UBERON:0004852!6.39e-53!18;UBERON:0000487!2.39e-42!22;UBERON:0006914!1.22e-36!25;UBERON:0000055!4.59e-28!69;UBERON:0003915!4.06e-27!9;UBERON:0004700!4.06e-27!9;UBERON:0001917!4.06e-27!9;UBERON:0002049!1.67e-23!79;UBERON:0007798!1.67e-23!79;UBERON:0004872!6.18e-21!84;UBERON:0001009!1.93e-19!113;UBERON:0001981!2.33e-19!60;UBERON:0007500!2.33e-19!60;UBERON:0004537!2.33e-19!60;UBERON:0006965!2.33e-19!60;UBERON:0004535!9.69e-19!110;UBERON:0001638!4.40e-16!9;UBERON:0003920!4.40e-16!9;UBERON:0004582!4.40e-16!9;UBERON:0003914!4.04e-14!118;UBERON:0001473!1.00e-13!8;UBERON:0004536!1.00e-13!8;UBERON:0006558!1.00e-13!8;UBERON:0004111!5.80e-12!241;UBERON:0000477!6.20e-12!286;UBERON:0002465!8.12e-11!10;UBERON:0000025!1.79e-10!194;UBERON:0001915!2.54e-10!3;UBERON:0001982!2.54e-10!3;UBERON:0005800!1.93e-07!2;UBERON:0001515!1.93e-07!2;UBERON:0003081!2.67e-07!216;UBERON:0002133!5.40e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.02e-88;18!UBERON:0001986;3.02e-88;18!UBERON:0004852;3.02e-88;18!UBERON:0000487;8.44e-72;22!UBERON:0006914;6.47e-63;25!UBERON:0003915;9.12e-45;9!UBERON:0004700;9.12e-45;9!UBERON:0001917;9.12e-45;9!UBERON:0000490;3.56e-42;33!UBERON:0000055;3.17e-26;65!UBERON:0001473;7.78e-26;8!UBERON:0004536;7.78e-26;8!UBERON:0006558;7.78e-26;8!UBERON:0001638;6.37e-23;9!UBERON:0003920;6.37e-23;9!UBERON:0004582;6.37e-23;9!UBERON:0002465;1.16e-20;10!UBERON:0007500;1.77e-19;56!UBERON:0001981;1.77e-19;56!UBERON:0004537;1.77e-19;56!UBERON:0002049;3.33e-18;75!UBERON:0007798;3.33e-18;75!UBERON:0005800;1.52e-17;2!UBERON:0001515;1.52e-17;2!UBERON:0003914;6.00e-13;74!UBERON:0010523;1.91e-12;3!UBERON:0001915;1.91e-12;3!UBERON:0001982;1.91e-12;3!UBERON:0001009;3.24e-12;112!UBERON:0000025;7.46e-11;93!UBERON:0004535;7.92e-11;109!UBERON:0002134;1.91e-09;1!UBERON:0005208;1.91e-09;1!UBERON:0004145;1.91e-09;1!UBERON:0005946;1.91e-09;1!UBERON:0005965;1.91e-09;1!UBERON:0002078;1.91e-09;1!UBERON:0001637;2.42e-09;42!UBERON:0003509;2.42e-09;42!UBERON:0004572;2.42e-09;42!UBERON:0004111;1.15e-08;130!UBERON:0002405;1.45e-07;27!UBERON:0002066;2.09e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.05e-88,18;UBERON:0001986,2.05e-88,18;UBERON:0004852,2.05e-88,18;UBERON:0000487,6.16e-72,22;UBERON:0006914,4.91e-63,25;UBERON:0000055,1.10e-50,68;UBERON:0003915,8.86e-45,9;UBERON:0004700,8.86e-45,9;UBERON:0001917,8.86e-45,9;UBERON:0002049,8.96e-44,78;UBERON:0007798,8.96e-44,78;UBERON:0007500,1.82e-33,59;UBERON:0001981,1.82e-33,59;UBERON:0004537,1.82e-33,59;UBERON:0006965,1.82e-33,59;UBERON:0004535,2.14e-30,109;UBERON:0001009,1.71e-29,112;UBERON:0001473,8.00e-26,8;UBERON:0004536,8.00e-26,8;UBERON:0006558,8.00e-26,8;UBERON:0001638,4.95e-23,9;UBERON:0003920,4.95e-23,9;UBERON:0004582,4.95e-23,9;UBERON:0004872,5.38e-23,83;UBERON:0002465,1.19e-20,10;UBERON:0003914,4.94e-20,117;UBERON:0005800,9.58e-18,2;UBERON:0001515,9.58e-18,2;UBERON:0004111,8.26e-15,240;UBERON:0010523,1.92e-12,3;UBERON:0001915,1.92e-12,3;UBERON:0001982,1.92e-12,3;UBERON:0000025,6.60e-11,192;UBERON:0003081,3.80e-10,203;UBERON:0000490,4.09e-10,148;UBERON:0002134,2.46e-09,1;UBERON:0005208,2.46e-09,1;UBERON:0005946,2.46e-09,1;UBERON:0005965,2.46e-09,1;UBERON:0002078,2.46e-09,1;UBERON:0001637,4.93e-09,42;UBERON:0003509,4.93e-09,42;UBERON:0004572,4.93e-09,42;UBERON:0002066,1.77e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,1.59009925893364,0.860234595106124,2.08284300964557,0.56530794192401,2.93649605346934,3.02629846134074,2.08994966536811,1.8089173141853,1.42306505074684,2.67776490211736,2.41697590265488,3.04108842287405,0.976248230192678,2.94130464276695,1.62028389576352,1.69669483739752,0.898117490504679,1.80178368773316,1.53316637465883,2.84779697870439,4.58004359826018,0,0,0,0,0,0,0,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95262181849859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59859605969933,2.31492756288305,0.570762456703795,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38131187387122,0.863663664408557,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,2.0638323896594,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,1.43574604915363,0,0,0.446342914883745,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0.544017803369474,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0.297046400327086,0,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0.190941474834495,0.606351566874658,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,1.59009925893364,0.860234595106124,2.08284300964557,0.56530794192401,2.93649605346934,3.02629846134074,2.08994966536811,1.8089173141853,1.42306505074684,2.67776490211736,2.41697590265488,3.04108842287405,0.976248230192678,2.94130464276695,1.62028389576352,1.69669483739752,0.898117490504679,1.80178368773316,1.53316637465883,2.84779697870439,4.58004359826018,0,0,0,0,0,0,0,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95262181849859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59859605969933,2.31492756288305,0.570762456703795,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38131187387122,0.863663664408557,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,2.0638323896594,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,1.43574604915363,0,0,0.446342914883745,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0.544017803369474,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0.297046400327086,0,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0.190941474834495,0.606351566874658,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p14@PTPRE | |short_description=p14@PTPRE | ||
}} | }} |
Latest revision as of 01:42, 17 September 2015
Short description: | p14@PTPRE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_PTPRE_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 0bp_to_ENST00000430713_5end |
EntrezGene: | PTPRE |
HGNC: | 9669 |
UniProt: | B4DRZ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 7.00e-122 | 24 |
endothelial cell | 1.97e-108 | 36 |
blood vessel endothelial cell | 2.05e-88 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.05e-88 | 18 |
meso-epithelial cell | 3.98e-86 | 45 |
lining cell | 4.08e-66 | 58 |
barrier cell | 4.08e-66 | 58 |
endothelial cell of artery | 8.86e-45 | 9 |
vein endothelial cell | 1.51e-34 | 6 |
lymphangioblast | 1.99e-34 | 6 |
endothelial cell of lymphatic vessel | 1.99e-34 | 6 |
vascular lymphangioblast | 1.99e-34 | 6 |
mesodermal cell | 5.56e-30 | 121 |
squamous epithelial cell | 1.34e-23 | 63 |
aortic endothelial cell | 2.57e-22 | 6 |
thoracic aorta endothelial cell | 9.58e-18 | 2 |
embryonic cell | 1.41e-12 | 250 |
epithelial cell | 1.64e-12 | 253 |
capillary endothelial cell | 1.92e-12 | 3 |
endothelial cell of umbilical vein | 6.96e-12 | 3 |
glomerular endothelial cell | 1.61e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.25e-09 | 1 |