FFCP PHASE1:Hg19::chr12:123756698..123756710,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=8099 | |EntrezGene=8099 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=14002 | |HGNC=14002 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=O14519 | |UniProt=O14519 | ||
|association_with_transcript=-11bp_to_ENST00000261692,NM_004642,uc001ueq.2_5end | |association_with_transcript=-11bp_to_ENST00000261692,NM_004642,uc001ueq.2_5end | ||
|cluster_id=chr12:123756698..123756710,- | |||
|description=CAGE_peak_12_at_CDK2AP1_5end | |description=CAGE_peak_12_at_CDK2AP1_5end | ||
|id=chr12:123756698..123756710,- | |id=chr12:123756698..123756710,- | ||
Latest revision as of 02:05, 17 September 2015
| Short description: | p12@CDK2AP1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_12_at_CDK2AP1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -11bp_to_ENST00000261692, NM_004642, uc001ueq.2_5end |
| EntrezGene: | CDK2AP1 |
| HGNC: | 14002 |
| UniProt: | O14519 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p12@CDK2AP1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural cell | 1.12e-09 | 25 |
| neuronal stem cell | 6.06e-08 | 8 |
| neuron | 9.76e-08 | 6 |
| neuroblast | 9.76e-08 | 6 |
| electrically signaling cell | 9.76e-08 | 6 |
Showing 1 to 5 of 5 entries
| Ontology term | p-value | n |
|---|---|---|
| segmental subdivision of nervous system | 2.72e-11 | 13 |
| segmental subdivision of hindbrain | 5.89e-10 | 12 |
| hindbrain | 5.89e-10 | 12 |
| presumptive hindbrain | 5.89e-10 | 12 |
| ectoderm-derived structure | 5.98e-10 | 171 |
| ectoderm | 5.98e-10 | 171 |
| presumptive ectoderm | 5.98e-10 | 171 |
| posterior neural tube | 1.48e-09 | 15 |
| chordal neural plate | 1.48e-09 | 15 |
| neural plate | 4.02e-09 | 82 |
Showing 1 to 10 of 25 entries
