FFCP PHASE1:Hg19::chr10:133795416..133795436,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=664 | |EntrezGene=664 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1084 | |HGNC=1084 | ||
|TSSclassifier=strong | |||
|UniProt=Q12983,B4DHJ7 | |UniProt=Q12983,B4DHJ7 | ||
|association_with_transcript=0bp_to_ENST00000368636,ENST00000540159,NM_004052,uc001lkv.1,uc010qut.1_5end | |||
|cluster_id=chr10:133795416..133795436,- | |||
|description=CAGE_peak_1_at_BNIP3_5end | |||
|id=chr10:133795416..133795436,- | |||
|ontology_enrichment_celltype=CL:0000055!1.01e-13!180;CL:0000359!3.17e-09!32;CL:0000192!2.69e-08!42;CL:0000514!2.69e-08!42;CL:0000680!2.88e-07!57;CL:0000056!2.88e-07!57;CL:0000355!2.88e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.47e-09;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.04e-09,32;CL:0000192,4.94e-08,43;CL:0000514,4.94e-08,43;CL:0000680,4.40e-07,58;CL:0000056,4.40e-07,58;CL:0000355,4.40e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.14e-12!365;UBERON:0004872!7.43e-10!84;UBERON:0001637!3.48e-09!42;UBERON:0003509!3.48e-09!42;UBERON:0004572!3.48e-09!42;UBERON:0000477!5.66e-09!286;UBERON:0002100!5.76e-09!216;UBERON:0005256!8.20e-09!143;UBERON:0000119!9.18e-09!312;UBERON:0000483!9.20e-09!309;UBERON:0000914!1.06e-08!83;UBERON:0002329!1.06e-08!83;UBERON:0003077!1.06e-08!83;UBERON:0003059!1.06e-08!83;UBERON:0007282!1.06e-08!83;UBERON:0009618!1.06e-08!83;UBERON:0007285!1.06e-08!83;UBERON:0001981!1.78e-08!60;UBERON:0007500!1.78e-08!60;UBERON:0004537!1.78e-08!60;UBERON:0006965!1.78e-08!60;UBERON:0004111!2.23e-08!241;UBERON:0000490!2.62e-08!138;UBERON:0003914!8.17e-08!118;UBERON:0000486!8.31e-08!82;UBERON:0001134!9.17e-08!61;UBERON:0002036!9.17e-08!61;UBERON:0003082!9.17e-08!61;UBERON:0000481!1.92e-07!347;UBERON:0000055!2.14e-07!69;UBERON:0004290!2.76e-07!70;UBERON:0002385!3.25e-07!63;UBERON:0001015!3.25e-07!63;UBERON:0000383!3.25e-07!63;UBERON:0002049!3.53e-07!79;UBERON:0007798!3.53e-07!79;UBERON:0000025!5.58e-07!194 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.83e-09,83;UBERON:0001637,3.34e-09,42;UBERON:0003509,3.34e-09,42;UBERON:0004572,3.34e-09,42;UBERON:0000483,5.59e-09,306;UBERON:0000119,5.60e-09,309;UBERON:0004111,1.42e-08,240;UBERON:0000490,3.50e-08,148;UBERON:0007500,4.56e-08,59;UBERON:0001981,4.56e-08,59;UBERON:0004537,4.56e-08,59;UBERON:0006965,4.56e-08,59;UBERON:0003914,4.81e-08,117;UBERON:0000486,1.33e-07,83;UBERON:0001134,1.41e-07,62;UBERON:0002036,1.41e-07,62;UBERON:0003082,1.41e-07,62;UBERON:0002100,1.45e-07,199;UBERON:0007524,2.50e-07,73;UBERON:0003104,3.00e-07,160;UBERON:0009142,3.00e-07,160;UBERON:0005256,3.21e-07,122;UBERON:0002329,3.97e-07,71;UBERON:0003059,3.97e-07,71;UBERON:0007282,3.97e-07,71;UBERON:0004290,3.97e-07,71;UBERON:0009618,3.97e-07,71;UBERON:0003077,4.34e-07,72;UBERON:0007285,4.34e-07,72;UBERON:0002385,4.81e-07,64;UBERON:0001015,4.81e-07,64;UBERON:0000383,4.81e-07,64;UBERON:0000025,4.81e-07,192;UBERON:0000055,5.32e-07,68;UBERON:0002049,8.93e-07,78;UBERON:0007798,8.93e-07,78 | |||
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| ||
|short_description=p1@BNIP3 | |||
}} | }} |
Latest revision as of 03:29, 17 September 2015
Short description: | p1@BNIP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BNIP3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000368636, ENST00000540159, NM_004052, uc001lkv.1, uc010qut.1_5end |
EntrezGene: | BNIP3 |
HGNC: | 1084 |
UniProt: | Q12983B4DHJ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.04e-09 | 32 |
smooth muscle cell | 4.94e-08 | 43 |
smooth muscle myoblast | 4.94e-08 | 43 |
muscle precursor cell | 4.40e-07 | 58 |
myoblast | 4.40e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.40e-07 | 58 |