FFCP PHASE1:Hg19::chr12:12491480..12491496,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:12491480..12491496,- to FFCP PHASE1:Hg19::chr12:12491480..12491496,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54682 | |EntrezGene=54682 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25505 | |HGNC=25505 | ||
|TSSclassifier=strong | |||
|UniProt=F5H3M3 | |UniProt=F5H3M3 | ||
|association_with_transcript=111bp_to_ENST00000545735_5end | |||
|cluster_id=chr12:12491480..12491496,- | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_3_at_MANSC1_5end | |||
|id=chr12:12491480..12491496,- | |||
|ontology_enrichment_celltype=CL:0002139!3.49e-11!24;CL:0000071!1.99e-08!18;CL:0002546!1.99e-08!18;CL:0000115!2.97e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.63e-17;24!CL:0000071;3.59e-15;18!CL:0000115;9.64e-12;36!CL:0002543;7.02e-09;6!CL:0000775;9.46e-09;3!CL:0002078;2.26e-07;45!CL:0000622;3.95e-07;5!CL:0002231;4.28e-07;3!CL:0002618;4.28e-07;3!CL:0002623;4.28e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,6.21e-17,24;CL:0000071,2.68e-15,18;CL:0002546,2.68e-15,18;CL:0000115,1.75e-13,36;CL:0002078,2.17e-11,45;CL:0002543,5.22e-09,6;CL:0000775,9.21e-09,3;CL:0000213,7.47e-08,58;CL:0000215,7.47e-08,58;CL:0000622,1.06e-07,5;CL:0002623,1.53e-07,3;CL:0002618,2.30e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;3.59e-15;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!1.37e-20!286;UBERON:0004111!1.00e-19!241;UBERON:0007023!5.34e-19!115;UBERON:0000468!3.78e-15!659;UBERON:0000922!1.64e-12!612;UBERON:0000480!1.83e-12!626;UBERON:0000467!2.44e-12!625;UBERON:0001007!4.21e-12!155;UBERON:0001555!4.21e-12!155;UBERON:0007026!4.21e-12!155;UBERON:0004921!1.53e-11!129;UBERON:0004185!1.53e-11!129;UBERON:0002050!2.63e-11!605;UBERON:0005423!2.63e-11!605;UBERON:0004119!3.55e-11!169;UBERON:0000925!3.55e-11!169;UBERON:0006595!3.55e-11!169;UBERON:0000923!5.30e-11!604;UBERON:0005291!5.30e-11!604;UBERON:0006598!5.30e-11!604;UBERON:0002532!5.30e-11!604;UBERON:0000025!6.08e-11!194;UBERON:0000483!6.98e-10!309;UBERON:0000119!2.36e-09!312;UBERON:0000077!1.10e-08!130;UBERON:0001986!1.99e-08!18;UBERON:0004638!1.99e-08!18;UBERON:0004852!1.99e-08!18;UBERON:0000481!3.21e-08!347;UBERON:0000055!7.29e-08!69;UBERON:0006914!8.27e-08!25;UBERON:0001041!1.92e-07!98;UBERON:0000161!2.34e-07!35;UBERON:0000064!5.49e-07!219;UBERON:0000466!5.73e-07!126;UBERON:0000487!6.23e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.59e-15;18!UBERON:0001986;3.59e-15;18!UBERON:0004852;3.59e-15;18!UBERON:0001044;1.37e-13;6!UBERON:0003293;1.37e-13;6!UBERON:0003294;1.37e-13;6!UBERON:0010047;1.37e-13;6!UBERON:0003408;1.37e-13;6!UBERON:0000167;1.37e-13;6!UBERON:0006914;5.51e-12;25!UBERON:0000487;6.81e-12;22!UBERON:0001041;9.16e-12;14!UBERON:0004921;6.08e-10;33!UBERON:0000490;1.30e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.68e-15,18;UBERON:0001986,2.68e-15,18;UBERON:0004852,2.68e-15,18;UBERON:0001044,2.96e-14,6;UBERON:0003293,2.96e-14,6;UBERON:0003294,2.96e-14,6;UBERON:0010047,2.96e-14,6;UBERON:0000167,2.96e-14,6;UBERON:0006914,3.28e-12,25;UBERON:0000487,5.40e-12,22;UBERON:0003408,3.35e-08,10;UBERON:0000055,8.57e-08,68;UBERON:0001009,4.34e-07,112;UBERON:0004111,6.09e-07,240;UBERON:0004535,9.97e-07,109 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0,0.783556884599516,0.245733936501509,0,0,0,0.247532705920093,0.331397375727916,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.0843174571537,0,1.15877215168659,0,0.486634870302636,0.189069634328136,0,0,0.523916301990851,0,0.370784442784429,0,0,0,0,0,0,0.39752481473341,0,1.04142150482278,0.56530794192401,1.25849830862972,2.47606237746061,1.25396979922086,0.516833518338658,1.06729878806013,0.66944122552934,1.61131726843659,0,1.95249646038536,0.735326160691737,4.0507097394088,1.7859945656816,1.79623498100936,1.12611480483322,1.53316637465883,0.949265659568129,1.09921046358244,1.31780417436063,0,0,0.496971951695318,0.506522046658319,0.132409180813219,0.573673241497627,0.709336764396714,0,0,0.24666754841716,0,1.34710672069688,0.817309515567294,0,0,0,0,0,0.149448680551801,0,0,0,0,0.368502951935304,0.103325781175765,0,0.741800787835671,0,0.718618141816238,0,0.375355559615893,0,0,0,0.300476117813194,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0.646584227275248,0,0.10075209822764,0,0.386521706326594,0.272746120590835,0.286804595389004,0.121973706129595,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0.721879481669586,0.828147600278907,0.337169380156203,0.241011029883482,0.992645754591546,0.435758888184812,0.237270619111097,0.674156540800822,0.392442930250692,0.769494313892781,1.4763109092493,0,0,0,2.53510069643662,0.982827216677626,0.590789906681404,0,1.35287282397425,0,0,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,0,0,0,0.866198686566443,1.38895653772983,1.14152491340759,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0,0,0,0,0.26593811658487,0,0.257207374262142,0,0,0.428933980974443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4860983352606,32.9077605124427,3.72973962092432,0.24538298343828,1.00034104211935,0,0.831883446123229,0.713715955188647,0.157702415033935,0.468565659970853,0.300946099727719,0,0,0,0,0.434418072340414,0,0,0,0.647142602455851,0,0,0,0,0,0,0.280660094433074,0.256278298511402,0,0.482561763430822,0,0,0,0.164254312027618,0.519254429183621,0.116210378459959,1.0877350463246,1.00253235151642,1.28913384510255,0.114814448164607,0.546273504020151,1.57349297951309,0,0.924184045252977,0,0,0.316654886678627,0,0.680374821106063,0.431831832204279,6.16909010761157,0.541892875087706,0,0,0,0,0.219259876645935,0,0,0.328014645699706,0.325378394664303,0.309123034943167,0,0,0,1.95018073810956,0,0.096670718292122,0,0,0,0.107420244868274,0,0.0852266274161009,0,0.165284915360978,0.192190067365106,0,0.30347334256665,0,0,0,0,0,0,0.74129687641568,0,0,0,0,0,0,0.318203247925937,0,0,0.274537029736055,0.117812402345686,0,1.58510321173008,0,0.48763373908959,1.21856744815642,0,0.136499911407986,0.565621727814851,0,0.551365343546124,0.66343897524122,0.438450885253763,0.578775534266688,0.655894752046633,0.202910376962704,0.30982349809975,0.281695602532241,0,0.0982490410131212,0,0.354761064070598,1.89996871767898,0.658589785919804,0,0,0,0,0,0.282431402330337,0.43050537267123,0,0.886860307073351,0,1.52234282769651,0,1.13929437434833,1.19115887728894,0.822724546172388,0.648473311192717,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0.278406173895242,0,0.270455678475983,0,0,0.18714054040822,0.293016358543788,0.121360521749513,0,0,0.47748896947538,0.296964680832639,0.307160702099232,0,0.281338832821026,0.111308705022906,0,0,3.18796781201712,0,2.01546198283421,0.511343412510774,0,0,0.269605053441981,0.179021174675609,0,0.887790650732402,0,1.11136990144637,0,0.649376687132959,1.99613798001194,0.7812832832557,0.437299999980979,0,0.568967241427498,0.254253650292766,0.472775363535873,0,0,0,0.885741385813839,0.723578631752448,1.52581736317083,0.884634079449797,0.295547618953547,0.658156191461918,0.21787692703798,0.139423744278603,0.461701551022782,0.113942055847001,0,0,0.977826347298073,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0.189753732724185,0.158936578980379,0.210998064528027,0.979396848954886,0.706765357169704,0,2.98578579323551,0.0884575645033392,1.22206028986725,0,0,0,0.134802265961354,1.60515529459758,0.234264445725339,0,0.586993856796269,0.242780379534093,1.18375320854817,0,0.61214552326098,0.379119477770928,0,0.103688191397247,0,0.330991955875499,0,0,0,0,4.16543372004314,0,0.174118413160805,1.39781334593624,0,0,0.146178634172371,0,1.16386819786103,0,1.80784592624426,0.137041924646751,0.794858446811959,0.253243183823515,1.17330829640882,0.160317640503067,1.06726497369676,0.59942882874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| ||
|short_description=p3@MANSC1 | |||
}} | }} |
Latest revision as of 03:44, 17 September 2015
Short description: | p3@MANSC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MANSC1_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 111bp_to_ENST00000545735_5end |
EntrezGene: | MANSC1 |
HGNC: | 25505 |
UniProt: | F5H3M3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 6.21e-17 | 24 |
blood vessel endothelial cell | 2.68e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.68e-15 | 18 |
endothelial cell | 1.75e-13 | 36 |
meso-epithelial cell | 2.17e-11 | 45 |
vein endothelial cell | 5.22e-09 | 6 |
neutrophil | 9.21e-09 | 3 |
lining cell | 7.47e-08 | 58 |
barrier cell | 7.47e-08 | 58 |
acinar cell | 1.06e-07 | 5 |
acinar cell of salivary gland | 1.53e-07 | 3 |
endothelial cell of umbilical vein | 2.30e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.68e-15 | 18 |
endothelium | 2.68e-15 | 18 |
cardiovascular system endothelium | 2.68e-15 | 18 |
saliva-secreting gland | 2.96e-14 | 6 |
gland of oral region | 2.96e-14 | 6 |
gland of foregut | 2.96e-14 | 6 |
oral gland | 2.96e-14 | 6 |
oral cavity | 2.96e-14 | 6 |
squamous epithelium | 3.28e-12 | 25 |
simple squamous epithelium | 5.40e-12 | 22 |
gland of gut | 3.35e-08 | 10 |
vessel | 8.57e-08 | 68 |
circulatory system | 4.34e-07 | 112 |
anatomical conduit | 6.09e-07 | 240 |
cardiovascular system | 9.97e-07 | 109 |