FFCP PHASE1:Hg19::chr5:175308859..175308869,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10814 | |EntrezGene=10814 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2310 | |HGNC=2310 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-65bp_to_AL512758_5end | |association_with_transcript=-65bp_to_AL512758_5end | ||
|cluster_id=chr5:175308859..175308869,+ | |||
|coexpression_cluster_id=C2685 | |coexpression_cluster_id=C2685 | ||
|description=CAGE_peak_39_at_CPLX2_5end | |description=CAGE_peak_39_at_CPLX2_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!3.45e-65!32;UBERON:0001893!3.63e-61!34;UBERON:0002020!6.40e-61!34;UBERON:0003528!6.40e-61!34;UBERON:0001049!6.91e-58!57;UBERON:0005068!6.91e-58!57;UBERON:0006241!6.91e-58!57;UBERON:0007135!6.91e-58!57;UBERON:0002791!3.10e-57!33;UBERON:0002619!1.33e-56!22;UBERON:0002780!4.15e-55!41;UBERON:0001890!4.15e-55!41;UBERON:0006240!4.15e-55!41;UBERON:0003080!1.06e-53!42;UBERON:0002616!1.77e-51!59;UBERON:0000956!1.30e-49!25;UBERON:0000203!1.30e-49!25;UBERON:0001950!4.19e-48!20;UBERON:0001017!1.07e-47!82;UBERON:0000955!3.81e-46!69;UBERON:0006238!3.81e-46!69;UBERON:0005743!3.23e-45!86;UBERON:0000073!2.20e-40!94;UBERON:0001016!2.20e-40!94;UBERON:0003075!1.64e-39!86;UBERON:0007284!1.64e-39!86;UBERON:0002346!1.74e-37!90;UBERON:0003056!1.41e-35!61;UBERON:0007023!2.69e-28!115;UBERON:0000033!2.04e-25!123;UBERON:0002021!3.73e-24!5;UBERON:0000153!5.94e-24!129;UBERON:0007811!5.94e-24!129;UBERON:0000349!1.17e-23!5;UBERON:0000025!2.52e-22!194;UBERON:0004121!2.44e-21!169;UBERON:0001871!4.47e-21!7;UBERON:0000924!1.08e-20!173;UBERON:0006601!1.08e-20!173;UBERON:0000200!6.86e-20!6;UBERON:0002420!1.87e-18!9;UBERON:0007245!1.87e-18!9;UBERON:0010009!1.87e-18!9;UBERON:0010011!1.87e-18!9;UBERON:0000454!1.87e-18!9;UBERON:0004111!1.52e-16!241;UBERON:0002771!5.23e-15!3;UBERON:0000477!7.87e-14!286;UBERON:0000483!2.73e-13!309;UBERON:0000119!4.34e-13!312;UBERON:0002308!8.33e-13!9;UBERON:0000125!8.33e-13!9;UBERON:0009663!5.68e-11!7;UBERON:0000369!5.72e-11!4;UBERON:0002435!5.72e-11!4;UBERON:0000204!5.72e-11!4;UBERON:0010082!5.72e-11!4;UBERON:0000475!6.89e-11!365;UBERON:0001954!7.23e-11!2;UBERON:0003022!7.23e-11!2;UBERON:0002421!7.23e-11!2;UBERON:0002600!7.23e-11!2;UBERON:0001876!1.29e-10!2;UBERON:0001873!1.64e-10!2;UBERON:0010122!1.64e-10!2;UBERON:0000064!1.66e-10!219;UBERON:0000481!1.48e-07!347;UBERON:0003076!2.30e-07!15;UBERON:0003057!2.30e-07!15;UBERON:0005383!2.80e-07!3;UBERON:0005382!2.80e-07!3;UBERON:0000988!7.76e-07!3;UBERON:0000062!8.90e-07!511 | |ontology_enrichment_uberon=UBERON:0001869!3.45e-65!32;UBERON:0001893!3.63e-61!34;UBERON:0002020!6.40e-61!34;UBERON:0003528!6.40e-61!34;UBERON:0001049!6.91e-58!57;UBERON:0005068!6.91e-58!57;UBERON:0006241!6.91e-58!57;UBERON:0007135!6.91e-58!57;UBERON:0002791!3.10e-57!33;UBERON:0002619!1.33e-56!22;UBERON:0002780!4.15e-55!41;UBERON:0001890!4.15e-55!41;UBERON:0006240!4.15e-55!41;UBERON:0003080!1.06e-53!42;UBERON:0002616!1.77e-51!59;UBERON:0000956!1.30e-49!25;UBERON:0000203!1.30e-49!25;UBERON:0001950!4.19e-48!20;UBERON:0001017!1.07e-47!82;UBERON:0000955!3.81e-46!69;UBERON:0006238!3.81e-46!69;UBERON:0005743!3.23e-45!86;UBERON:0000073!2.20e-40!94;UBERON:0001016!2.20e-40!94;UBERON:0003075!1.64e-39!86;UBERON:0007284!1.64e-39!86;UBERON:0002346!1.74e-37!90;UBERON:0003056!1.41e-35!61;UBERON:0007023!2.69e-28!115;UBERON:0000033!2.04e-25!123;UBERON:0002021!3.73e-24!5;UBERON:0000153!5.94e-24!129;UBERON:0007811!5.94e-24!129;UBERON:0000349!1.17e-23!5;UBERON:0000025!2.52e-22!194;UBERON:0004121!2.44e-21!169;UBERON:0001871!4.47e-21!7;UBERON:0000924!1.08e-20!173;UBERON:0006601!1.08e-20!173;UBERON:0000200!6.86e-20!6;UBERON:0002420!1.87e-18!9;UBERON:0007245!1.87e-18!9;UBERON:0010009!1.87e-18!9;UBERON:0010011!1.87e-18!9;UBERON:0000454!1.87e-18!9;UBERON:0004111!1.52e-16!241;UBERON:0002771!5.23e-15!3;UBERON:0000477!7.87e-14!286;UBERON:0000483!2.73e-13!309;UBERON:0000119!4.34e-13!312;UBERON:0002308!8.33e-13!9;UBERON:0000125!8.33e-13!9;UBERON:0009663!5.68e-11!7;UBERON:0000369!5.72e-11!4;UBERON:0002435!5.72e-11!4;UBERON:0000204!5.72e-11!4;UBERON:0010082!5.72e-11!4;UBERON:0000475!6.89e-11!365;UBERON:0001954!7.23e-11!2;UBERON:0003022!7.23e-11!2;UBERON:0002421!7.23e-11!2;UBERON:0002600!7.23e-11!2;UBERON:0001876!1.29e-10!2;UBERON:0001873!1.64e-10!2;UBERON:0010122!1.64e-10!2;UBERON:0000064!1.66e-10!219;UBERON:0000481!1.48e-07!347;UBERON:0003076!2.30e-07!15;UBERON:0003057!2.30e-07!15;UBERON:0005383!2.80e-07!3;UBERON:0005382!2.80e-07!3;UBERON:0000988!7.76e-07!3;UBERON:0000062!8.90e-07!511 | ||
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|short_description=p39@CPLX2 | |short_description=p39@CPLX2 | ||
}} | }} |
Latest revision as of 03:57, 17 September 2015
Short description: | p39@CPLX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_39_at_CPLX2_5end |
Coexpression cluster: | C2685_occipital_medial_parietal_hippocampus_amygdala_caudate_temporal |
Association with transcript: | -65bp_to_AL512758_5end |
EntrezGene: | CPLX2 |
HGNC: | 2310 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 5.04e-34 | 2 |
Ammon's horn | 7.05e-34 | 2 |
lobe parts of cerebral cortex | 7.05e-34 | 2 |
hippocampal formation | 7.05e-34 | 2 |
limbic lobe | 7.05e-34 | 2 |
regional part of cerebral cortex | 1.01e-26 | 22 |
cerebral cortex | 8.76e-24 | 25 |
pallium | 8.76e-24 | 25 |
regional part of telencephalon | 5.33e-19 | 32 |
cerebral hemisphere | 5.33e-19 | 32 |
brain grey matter | 5.55e-18 | 34 |
gray matter | 5.55e-18 | 34 |
telencephalon | 5.55e-18 | 34 |
regional part of forebrain | 3.52e-15 | 41 |
forebrain | 3.52e-15 | 41 |
anterior neural tube | 3.52e-15 | 41 |
future forebrain | 3.52e-15 | 41 |
occipital lobe | 1.40e-14 | 5 |
limbic system | 1.83e-14 | 5 |
neocortex | 1.02e-13 | 20 |
gyrus | 2.45e-12 | 6 |
regional part of nervous system | 4.68e-12 | 53 |
regional part of brain | 4.68e-12 | 53 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
temporal lobe | 8.99e-11 | 6 |
pre-chordal neural plate | 1.22e-10 | 61 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |