FFCP PHASE1:Hg19::chr4:187112703..187112776,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:187112703..187112776,+ to FFCP PHASE1:Hg19::chr4:187112703..187112776,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=285440 | |EntrezGene=285440 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23198 | |HGNC=23198 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UWV9 | |UniProt=Q6UWV9 | ||
|association_with_transcript=0bp_to_uc003iyx.1_5end | |||
|cluster_id=chr4:187112703..187112776,+ | |||
|description=CAGE_peak_1_at_CYP4V2_5end | |||
|id=chr4:187112703..187112776,+ | |||
|ontology_enrichment_celltype=CL:0000791!3.91e-12!18;CL:0000789!3.91e-12!18;CL:0002420!3.91e-12!18;CL:0002419!3.91e-12!18;CL:0000790!3.91e-12!18;CL:0000084!3.95e-09!25;CL:0000827!3.95e-09!25;CL:0000838!5.12e-08!52;CL:0000625!7.26e-08!11;CL:0000542!8.48e-08!53;CL:0000051!8.48e-08!53 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.31e-12;18!CL:0000789;2.31e-12;18!CL:0002419;2.31e-12;18!CL:0000084;1.73e-09;25!CL:0000625;5.18e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.75e-12,18;CL:0000789,3.75e-12,18;CL:0002420,3.75e-12,18;CL:0002419,3.75e-12,18;CL:0000790,3.75e-12,18;CL:0000084,3.83e-09,25;CL:0000827,3.83e-09,25;CL:0000838,4.99e-08,52;CL:0000625,7.07e-08,11;CL:0000542,8.27e-08,53;CL:0000051,8.27e-08,53 | |||
|ontology_enrichment_development_v019=CL:0000790;2.31e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.89e-28!115;UBERON:0001049!3.46e-14!57;UBERON:0005068!3.46e-14!57;UBERON:0006241!3.46e-14!57;UBERON:0007135!3.46e-14!57;UBERON:0002616!2.57e-12!59;UBERON:0003080!7.04e-12!42;UBERON:0002780!9.46e-12!41;UBERON:0001890!9.46e-12!41;UBERON:0006240!9.46e-12!41;UBERON:0000955!4.97e-11!69;UBERON:0006238!4.97e-11!69;UBERON:0001017!8.59e-10!82;UBERON:0003075!9.27e-10!86;UBERON:0007284!9.27e-10!86;UBERON:0005743!1.35e-09!86;UBERON:0000073!1.72e-09!94;UBERON:0001016!1.72e-09!94;UBERON:0001893!6.74e-09!34;UBERON:0002020!6.87e-09!34;UBERON:0003528!6.87e-09!34;UBERON:0002791!1.12e-08!33;UBERON:0000153!2.24e-08!129;UBERON:0007811!2.24e-08!129;UBERON:0001869!5.14e-08!32;UBERON:0002346!7.08e-08!90;UBERON:0003056!1.84e-07!61;UBERON:0000033!2.69e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;7.15e-09;41!UBERON:0001890;7.15e-09;41!UBERON:0000073;2.63e-08;53!UBERON:0002616;2.63e-08;53!UBERON:0001893;4.95e-08;34!UBERON:0007023;5.76e-08;114!UBERON:0003528;7.70e-08;34!UBERON:0002020;7.70e-08;34!UBERON:0002791;1.30e-07;32!UBERON:0001869;1.86e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.32e-27,114;UBERON:0001049,5.14e-14,56;UBERON:0005068,5.14e-14,56;UBERON:0006241,5.14e-14,56;UBERON:0007135,5.14e-14,56;UBERON:0000073,7.06e-13,53;UBERON:0002616,7.06e-13,53;UBERON:0002780,9.08e-12,41;UBERON:0001890,9.08e-12,41;UBERON:0003080,9.08e-12,41;UBERON:0006240,9.08e-12,41;UBERON:0000955,7.41e-11,68;UBERON:0006238,7.41e-11,68;UBERON:0001017,1.47e-09,81;UBERON:0001016,1.64e-09,89;UBERON:0003075,2.78e-09,82;UBERON:0007284,2.78e-09,82;UBERON:0001893,6.54e-09,34;UBERON:0003528,6.67e-09,34;UBERON:0002020,6.67e-09,34;UBERON:0002791,3.11e-08,32;UBERON:0001869,5.01e-08,32;UBERON:0002346,1.83e-07,86;UBERON:0003056,1.91e-07,61 | |||
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| ||
|short_description=p1@CYP4V2 | |||
}} | }} |
Latest revision as of 04:39, 17 September 2015
Short description: | p1@CYP4V2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CYP4V2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc003iyx.1_5end |
EntrezGene: | CYP4V2 |
HGNC: | 23198 |
UniProt: | Q6UWV9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.75e-12 | 18 |
alpha-beta T cell | 3.75e-12 | 18 |
immature T cell | 3.75e-12 | 18 |
mature T cell | 3.75e-12 | 18 |
immature alpha-beta T cell | 3.75e-12 | 18 |
T cell | 3.83e-09 | 25 |
pro-T cell | 3.83e-09 | 25 |
lymphoid lineage restricted progenitor cell | 4.99e-08 | 52 |
CD8-positive, alpha-beta T cell | 7.07e-08 | 11 |
lymphocyte | 8.27e-08 | 53 |
common lymphoid progenitor | 8.27e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.32e-27 | 114 |
neural tube | 5.14e-14 | 56 |
neural rod | 5.14e-14 | 56 |
future spinal cord | 5.14e-14 | 56 |
neural keel | 5.14e-14 | 56 |
regional part of nervous system | 7.06e-13 | 53 |
regional part of brain | 7.06e-13 | 53 |
regional part of forebrain | 9.08e-12 | 41 |
forebrain | 9.08e-12 | 41 |
anterior neural tube | 9.08e-12 | 41 |
future forebrain | 9.08e-12 | 41 |
brain | 7.41e-11 | 68 |
future brain | 7.41e-11 | 68 |
central nervous system | 1.47e-09 | 81 |
nervous system | 1.64e-09 | 89 |
neural plate | 2.78e-09 | 82 |
presumptive neural plate | 2.78e-09 | 82 |
telencephalon | 6.54e-09 | 34 |
brain grey matter | 6.67e-09 | 34 |
gray matter | 6.67e-09 | 34 |
regional part of telencephalon | 3.11e-08 | 32 |
cerebral hemisphere | 5.01e-08 | 32 |
neurectoderm | 1.83e-07 | 86 |
pre-chordal neural plate | 1.91e-07 | 61 |