FFCP PHASE1:Hg19::chr13:36050956..36050969,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26960 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7648 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc010teg.1_5end | |||
|cluster_id=chr13:36050956..36050969,+ | |||
|coexpression_cluster_id=C699 | |||
|description=CAGE_peak_4_at_NBEA_5end | |||
|id=chr13:36050956..36050969,+ | |||
|ontology_enrichment_celltype=CL:0000064!2.71e-13!3;CL:0005012!2.71e-13!3;CL:0000067!2.71e-13!3;CL:0002304!2.71e-13!3;CL:0000075!5.17e-13!27;CL:0000306!1.10e-09!4;CL:0002222!1.10e-09!4;CL:0002224!1.10e-09!4;CL:0000710!5.46e-09!20 | |||
|ontology_enrichment_celltype_v019=CL:0000064;4.43e-31;3!CL:0000067;4.43e-31;3!CL:0005012;4.43e-31;3!CL:0002304;4.43e-31;3!CL:0000075;1.01e-22;27!CL:0000333;5.45e-19;5!CL:0000710;1.37e-17;20!CL:0000197;2.47e-15;6!CL:0000098;2.47e-15;6!CL:0002167;2.47e-15;6!CL:0000342;4.22e-11;1!CL:0002574;4.22e-11;1!CL:0002565;4.22e-11;1!CL:0000306;5.18e-11;4!CL:0002222;5.18e-11;4!CL:0002224;5.18e-11;4!CL:0002077;6.41e-10;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,4.91e-31,3;CL:0000067,4.91e-31,3;CL:0005012,4.91e-31,3;CL:0002304,4.91e-31,3;CL:0000075,1.13e-22,27;CL:0000710,1.58e-17,20;CL:0000197,3.01e-15,6;CL:0000098,3.01e-15,6;CL:0002167,3.01e-15,6;CL:0000133,5.61e-15,59;CL:0000221,4.25e-12,72;CL:0002574,3.28e-11,1;CL:0000342,4.91e-11,1;CL:0002565,4.91e-11,1;CL:0000306,4.92e-11,4;CL:0002222,4.92e-11,4;CL:0002224,4.92e-11,4;CL:0002077,3.76e-10,34 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.13e-30;3!CL:0000221;5.08e-09;72!CL:0000133;7.46e-08;59 | |||
|ontology_enrichment_disease=DOID:169!7.30e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:169;6.27e-16;6!DOID:171;8.87e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,6.12e-16,6;DOID:171,8.74e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0007625!2.98e-28!11;UBERON:0000970!1.33e-26!20;UBERON:0002104!3.34e-25!21;UBERON:0001456!6.01e-25!21;UBERON:0000019!1.90e-23!19;UBERON:0000047!1.90e-23!19;UBERON:0004088!1.90e-23!19;UBERON:0003072!1.90e-23!19;UBERON:0003071!1.90e-23!19;UBERON:0004128!1.90e-23!19;UBERON:0000020!9.05e-23!23;UBERON:0001032!1.05e-21!24;UBERON:0004456!1.05e-21!24;UBERON:0004733!2.60e-19!12;UBERON:0002028!2.60e-19!12;UBERON:0007277!2.60e-19!12;UBERON:0003076!3.33e-19!15;UBERON:0003057!3.33e-19!15;UBERON:0004732!1.01e-17!13;UBERON:0001801!2.39e-17!14;UBERON:0005085!2.53e-17!29;UBERON:0001444!5.08e-17!48;UBERON:0000488!6.05e-17!4;UBERON:0002346!6.91e-17!90;UBERON:0003075!3.04e-16!86;UBERON:0007284!3.04e-16!86;UBERON:0000153!3.37e-16!129;UBERON:0007811!3.37e-16!129;UBERON:0000033!7.20e-16!123;UBERON:0002680!4.89e-15!9;UBERON:0001895!4.89e-15!9;UBERON:0010092!4.89e-15!9;UBERON:0000924!6.86e-15!173;UBERON:0006601!6.86e-15!173;UBERON:0004121!3.04e-14!169;UBERON:0000063!5.91e-14!97;UBERON:0001778!2.71e-13!3;UBERON:0001775!2.71e-13!3;UBERON:0000988!1.47e-11!3;UBERON:0002298!2.31e-11!8;UBERON:0002203!2.62e-11!6;UBERON:0001768!2.62e-11!6;UBERON:0010077!1.10e-09!4;UBERON:0005389!1.10e-09!4;UBERON:0000484!1.10e-09!4;UBERON:0002546!1.10e-09!4;UBERON:0000965!1.10e-09!4;UBERON:0001803!1.10e-09!4;UBERON:0003073!1.10e-09!4;UBERON:0005426!1.10e-09!4;UBERON:0000073!1.07e-08!94;UBERON:0001016!1.07e-08!94;UBERON:0002148!2.79e-08!2;UBERON:0009662!2.79e-08!2;UBERON:0000013!3.60e-08!5;UBERON:0002410!3.60e-08!5;UBERON:0000076!3.85e-08!8;UBERON:0003056!6.65e-08!61;UBERON:0000966!1.05e-07!5;UBERON:0005388!1.05e-07!5;UBERON:0001802!1.05e-07!5;UBERON:0000475!1.23e-07!365;UBERON:0002037!9.95e-07!6;UBERON:0006215!9.95e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;2.25e-40;4!UBERON:0007625;1.99e-32;11!UBERON:0000970;2.96e-31;20!UBERON:0001778;4.43e-31;3!UBERON:0001775;4.43e-31;3!UBERON:0002104;9.96e-30;21!UBERON:0000020;4.53e-27;23!UBERON:0002203;4.73e-27;6!UBERON:0001768;4.73e-27;6!UBERON:0002200;4.73e-27;6!UBERON:0001032;6.60e-26;24!UBERON:0004456;6.60e-26;24!UBERON:0001801;2.02e-25;14!UBERON:0000019;3.10e-25;19!UBERON:0000047;3.10e-25;19!UBERON:0004088;3.10e-25;19!UBERON:0010230;3.10e-25;19!UBERON:0001456;8.93e-23;21!UBERON:0000013;5.45e-19;5!UBERON:0002410;5.45e-19;5!UBERON:0002037;1.54e-15;6!UBERON:0006876;6.80e-15;11!UBERON:0002506;4.22e-11;1!UBERON:0001769;4.22e-11;1!UBERON:0010077;5.18e-11;4!UBERON:0005389;5.18e-11;4!UBERON:0000484;5.18e-11;4!UBERON:0000965;5.18e-11;4!UBERON:0001803;5.18e-11;4!UBERON:0010371;5.32e-11;31!UBERON:0000010;8.30e-11;8!UBERON:0002680;1.50e-10;9!UBERON:0001895;1.50e-10;9!UBERON:0004733;4.86e-08;12!UBERON:0002028;4.86e-08;12!UBERON:0004732;1.86e-07;13!UBERON:0001444;7.45e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,2.90e-40,4;UBERON:0007625,2.16e-32,11;UBERON:0001778,4.91e-31,3;UBERON:0001775,4.91e-31,3;UBERON:0000970,9.78e-30,21;UBERON:0002104,9.78e-30,21;UBERON:0002203,5.60e-27,6;UBERON:0001768,5.60e-27,6;UBERON:0002200,5.60e-27,6;UBERON:0000020,6.49e-26,24;UBERON:0001032,6.49e-26,24;UBERON:0004456,6.49e-26,24;UBERON:0001801,2.15e-25,14;UBERON:0000019,5.96e-24,20;UBERON:0000047,5.96e-24,20;UBERON:0010312,5.96e-24,20;UBERON:0004088,5.96e-24,20;UBERON:0010230,5.96e-24,20;UBERON:0003072,5.96e-24,20;UBERON:0004128,5.96e-24,20;UBERON:0003071,5.96e-24,20;UBERON:0001456,1.02e-21,22;UBERON:0000013,5.29e-19,5;UBERON:0002410,5.29e-19,5;UBERON:0002037,1.36e-15,6;UBERON:0006215,1.36e-15,6;UBERON:0005085,3.14e-15,31;UBERON:0006876,7.45e-15,11;UBERON:0002506,4.91e-11,1;UBERON:0001769,4.91e-11,1;UBERON:0010077,4.92e-11,4;UBERON:0005389,4.92e-11,4;UBERON:0000484,4.92e-11,4;UBERON:0002546,4.92e-11,4;UBERON:0000965,4.92e-11,4;UBERON:0001803,4.92e-11,4;UBERON:0003073,4.92e-11,4;UBERON:0005426,4.92e-11,4;UBERON:0000010,8.16e-11,8;UBERON:0003075,1.16e-10,82;UBERON:0007284,1.16e-10,82;UBERON:0002680,1.38e-10,9;UBERON:0001895,1.38e-10,9;UBERON:0010092,1.38e-10,9;UBERON:0002346,4.19e-10,86;UBERON:0001444,2.21e-09,49;UBERON:0004121,3.87e-09,171;UBERON:0000924,3.87e-09,171;UBERON:0006601,3.87e-09,171;UBERON:0010371,4.00e-08,104;UBERON:0000033,4.04e-08,56;UBERON:0004733,4.58e-08,12;UBERON:0002028,4.58e-08,12;UBERON:0007277,4.58e-08,12;UBERON:0004732,1.76e-07,13;UBERON:0000153,2.90e-07,62;UBERON:0007811,2.90e-07,62;UBERON:0003056,2.90e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2097602537193,2.4390233720882,3.16205228495254,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0.505008341862199,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,1.01736355386293,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20097467208968,0,0,0,0,0,0,1.44331342025273,7.88326753830522,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42743191037729,2.05013139544115,1.17141414992713,0,0,0,0,0,1.56390506042549,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.976135183992909,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05163472634166,1.76926815889959,2.65992857058193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,6.55344148263544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.124192805882767,1.52183498429854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.54576790691545,3.34256915329714,0,3.38549878395243,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0.175871244359621,0,0,0.336283722218824,0,0,0,0,0,0.203909198930495,0,0,0,0,0,0,0,0,0,3.78825684136279,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0,0.219881033490858,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@NBEA | |||
}} |
Latest revision as of 05:14, 17 September 2015
Short description: | p4@NBEA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NBEA_5end |
Coexpression cluster: | C699_medulloblastoma_Lens_neuroblastoma_Ciliary_eye_small_cerebellum |
Association with transcript: | 0bp_to_uc010teg.1_5end |
EntrezGene: | NBEA |
HGNC: | 7648 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 4.91e-31 | 3 |
ciliated epithelial cell | 4.91e-31 | 3 |
multi-ciliated epithelial cell | 4.91e-31 | 3 |
non-pigmented ciliary epithelial cell | 4.91e-31 | 3 |
columnar/cuboidal epithelial cell | 1.13e-22 | 27 |
neurecto-epithelial cell | 1.58e-17 | 20 |
receptor cell | 3.01e-15 | 6 |
sensory epithelial cell | 3.01e-15 | 6 |
olfactory epithelial cell | 3.01e-15 | 6 |
neurectodermal cell | 5.61e-15 | 59 |
ectodermal cell | 4.25e-12 | 72 |
stromal cell of pancreas | 3.28e-11 | 1 |
pigment cell (sensu Vertebrata) | 4.91e-11 | 1 |
iris pigment epithelial cell | 4.91e-11 | 1 |
crystallin accumulating cell | 4.92e-11 | 4 |
vertebrate lens cell | 4.92e-11 | 4 |
lens epithelial cell | 4.92e-11 | 4 |
ecto-epithelial cell | 3.76e-10 | 34 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 6.12e-16 | 6 |
neuroectodermal tumor | 8.74e-10 | 10 |