FFCP PHASE1:Hg19::chr10:135207623..135207679,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:135207623..135207679,+
|short_description=p2@MTG1
|description=CAGE_peak_2_at_MTG1_5end
|association_with_transcript=0bp_to_ENST00000317502,ENST0000049833...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=92170 | |EntrezGene=92170 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32159 | |HGNC=32159 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BT17 | |UniProt=Q9BT17 | ||
|association_with_transcript=0bp_to_ENST00000317502,ENST00000498334_5end | |||
|cluster_id=chr10:135207623..135207679,+ | |||
|description=CAGE_peak_2_at_MTG1_5end | |||
|id=chr10:135207623..135207679,+ | |||
|ontology_enrichment_celltype=CL:0002078!1.24e-14!44;CL:0000115!2.16e-14!35;CL:0002139!2.20e-12!24;CL:0000222!2.09e-10!119;CL:0000071!2.19e-10!18;CL:0002546!2.19e-10!18;CL:0000213!3.94e-09!57;CL:0000215!3.94e-09!57;CL:0000066!8.65e-09!254;CL:0002321!1.86e-08!248;CL:0000220!1.94e-08!246;CL:1000449!2.20e-08!16;CL:0002681!2.03e-07!13;CL:0002584!2.03e-07!13;CL:1000497!5.08e-07!18;CL:0002518!5.08e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.52e-12;36!CL:0002139;2.61e-12;24!CL:0000071;2.26e-10;18!CL:0002078;6.51e-10;45!CL:1000449;8.06e-09;15!CL:0002681;6.49e-08;12!CL:0002584;6.49e-08;12!CL:1000497;2.38e-07;17!CL:0002518;2.38e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002078,3.35e-15,45;CL:0000115,5.58e-15,36;CL:0002139,2.20e-12,24;CL:0000222,9.63e-11,121;CL:0000071,2.19e-10,18;CL:0002546,2.19e-10,18;CL:0000213,1.39e-09,58;CL:0000215,1.39e-09,58;CL:0000066,8.51e-09,253;CL:1000449,8.65e-09,15;CL:0002321,9.82e-09,250;CL:0002681,7.41e-08,12;CL:0002584,7.41e-08,12;CL:1000497,2.65e-07,17;CL:0002518,2.65e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002546;2.26e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.80e-11!118;UBERON:0001986!2.19e-10!18;UBERON:0004638!2.19e-10!18;UBERON:0004852!2.19e-10!18;UBERON:0005172!3.91e-10!55;UBERON:0005173!3.91e-10!55;UBERON:0002049!1.33e-09!79;UBERON:0007798!1.33e-09!79;UBERON:0000490!3.39e-09!138;UBERON:0004211!2.20e-08!16;UBERON:0001285!2.20e-08!16;UBERON:0007684!2.20e-08!16;UBERON:0003220!2.20e-08!16;UBERON:0004208!2.20e-08!16;UBERON:0000487!4.86e-08!22;UBERON:0000055!8.68e-08!69;UBERON:0001851!1.30e-07!16;UBERON:0003887!1.41e-07!21;UBERON:0002113!1.74e-07!27;UBERON:0003918!1.74e-07!27;UBERON:0005095!1.74e-07!27;UBERON:0007687!1.74e-07!27;UBERON:0002417!1.95e-07!61;UBERON:0000916!1.95e-07!61;UBERON:0001225!2.03e-07!13;UBERON:0008987!2.03e-07!13;UBERON:0000353!3.08e-07!17;UBERON:0006555!3.34e-07!17;UBERON:0005103!3.34e-07!17;UBERON:0000083!3.34e-07!17;UBERON:0009201!3.34e-07!17;UBERON:0004819!3.34e-07!17;UBERON:0006553!3.34e-07!17;UBERON:0003074!3.34e-07!17;UBERON:0003060!3.34e-07!17;UBERON:0006914!4.88e-07!25;UBERON:0000080!6.10e-07!18;UBERON:0002120!6.10e-07!18;UBERON:0004875!6.10e-07!18;UBERON:0005721!6.10e-07!18;UBERON:0005754!6.10e-07!18;UBERON:0007297!6.10e-07!18;UBERON:0003104!7.11e-07!238;UBERON:0009142!7.11e-07!238;UBERON:0000119!8.84e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.26e-10;18!UBERON:0001986;2.26e-10;18!UBERON:0004852;2.26e-10;18!UBERON:0002113;6.53e-09;24!UBERON:0011143;6.53e-09;24!UBERON:0006555;8.06e-09;15!UBERON:0004819;8.06e-09;15!UBERON:0001285;8.06e-09;15!UBERON:0007684;8.06e-09;15!UBERON:0000490;1.98e-08;33!UBERON:0000353;2.53e-08;15!UBERON:0000487;4.64e-08;22!UBERON:0001851;4.98e-08;15!UBERON:0001225;6.49e-08;12!UBERON:0008987;6.49e-08;12!UBERON:0005172;3.24e-07;52!UBERON:0005173;3.24e-07;52!UBERON:0006914;4.50e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.59e-11,117;UBERON:0004638,2.19e-10,18;UBERON:0001986,2.19e-10,18;UBERON:0004852,2.19e-10,18;UBERON:0005172,2.93e-10,54;UBERON:0005173,2.93e-10,54;UBERON:0000490,6.52e-10,148;UBERON:0002049,7.43e-10,78;UBERON:0007798,7.43e-10,78;UBERON:0004211,8.65e-09,15;UBERON:0009773,8.65e-09,15;UBERON:0001231,8.65e-09,15;UBERON:0001285,8.65e-09,15;UBERON:0007684,8.65e-09,15;UBERON:0004208,8.65e-09,15;UBERON:0000353,2.96e-08,15;UBERON:0000487,4.86e-08,22;UBERON:0000055,5.06e-08,68;UBERON:0001851,5.71e-08,15;UBERON:0001225,7.41e-08,12;UBERON:0008987,7.41e-08,12;UBERON:0002113,1.11e-07,26;UBERON:0003918,1.11e-07,26;UBERON:0011143,1.11e-07,26;UBERON:0005095,1.11e-07,26;UBERON:0007687,1.11e-07,26;UBERON:0006555,1.63e-07,16;UBERON:0004819,1.63e-07,16;UBERON:0002417,1.64e-07,60;UBERON:0000916,1.64e-07,60;UBERON:0005177,2.83e-07,101;UBERON:0006914,4.88e-07,25;UBERON:0003104,9.09e-07,160;UBERON:0009142,9.09e-07,160 | |||
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| ||
|short_description=p2@MTG1 | |||
}} | }} |
Latest revision as of 05:49, 17 September 2015
Short description: | p2@MTG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MTG1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000317502, ENST00000498334_5end |
EntrezGene: | MTG1 |
HGNC: | 32159 |
UniProt: | Q9BT17 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meso-epithelial cell | 3.35e-15 | 45 |
endothelial cell | 5.58e-15 | 36 |
endothelial cell of vascular tree | 2.20e-12 | 24 |
mesodermal cell | 9.63e-11 | 121 |
blood vessel endothelial cell | 2.19e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.19e-10 | 18 |
lining cell | 1.39e-09 | 58 |
barrier cell | 1.39e-09 | 58 |
epithelial cell | 8.51e-09 | 253 |
epithelial cell of nephron | 8.65e-09 | 15 |
embryonic cell | 9.82e-09 | 250 |
kidney cortical cell | 7.41e-08 | 12 |
renal cortical epithelial cell | 7.41e-08 | 12 |
kidney cell | 2.65e-07 | 17 |
kidney epithelial cell | 2.65e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 1.59e-11 | 117 |
blood vessel endothelium | 2.19e-10 | 18 |
endothelium | 2.19e-10 | 18 |
cardiovascular system endothelium | 2.19e-10 | 18 |
abdomen element | 2.93e-10 | 54 |
abdominal segment element | 2.93e-10 | 54 |
unilaminar epithelium | 6.52e-10 | 148 |
vasculature | 7.43e-10 | 78 |
vascular system | 7.43e-10 | 78 |
nephron epithelium | 8.65e-09 | 15 |
renal tubule | 8.65e-09 | 15 |
nephron tubule | 8.65e-09 | 15 |
nephron | 8.65e-09 | 15 |
uriniferous tubule | 8.65e-09 | 15 |
nephrogenic mesenchyme | 8.65e-09 | 15 |
parenchyma | 2.96e-08 | 15 |
simple squamous epithelium | 4.86e-08 | 22 |
vessel | 5.06e-08 | 68 |
cortex | 5.71e-08 | 15 |
cortex of kidney | 7.41e-08 | 12 |
renal parenchyma | 7.41e-08 | 12 |
kidney | 1.11e-07 | 26 |
kidney mesenchyme | 1.11e-07 | 26 |
upper urinary tract | 1.11e-07 | 26 |
kidney rudiment | 1.11e-07 | 26 |
kidney field | 1.11e-07 | 26 |
excretory tube | 1.63e-07 | 16 |
kidney epithelium | 1.63e-07 | 16 |
abdominal segment of trunk | 1.64e-07 | 60 |
abdomen | 1.64e-07 | 60 |
trunk region element | 2.83e-07 | 101 |
squamous epithelium | 4.88e-07 | 25 |
mesenchyme | 9.09e-07 | 160 |
entire embryonic mesenchyme | 9.09e-07 | 160 |