FFCP PHASE1:Hg19::chr3:186648507..186648566,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:186648507..186648566,+ to FFCP PHASE1:Hg19::chr3:186648507..186648566,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6480 | |EntrezGene=6480 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10860 | |HGNC=10860 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000468614,uc003frb.2,uc003frc.2_5end | |||
|cluster_id=chr3:186648507..186648566,+ | |||
|description=CAGE_peak_5_at_ST6GAL1_5end | |||
|id=chr3:186648507..186648566,+ | |||
|ontology_enrichment_celltype=CL:0002139!3.64e-14!24;CL:0000115!5.91e-14!35;CL:0002078!2.52e-11!44;CL:0000071!1.35e-10!18;CL:0002546!1.35e-10!18;CL:0000213!2.38e-09!57;CL:0000215!2.38e-09!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.74e-20;24!CL:0000115;1.48e-16;36!CL:0000071;5.52e-15;18!CL:0002078;3.99e-10;45!CL:0000213;4.85e-09;58!CL:0000215;4.85e-09;58!CL:1000413;1.05e-07;9!CL:0002138;9.60e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.67e-20,24;CL:0000115,7.86e-20,36;CL:0002078,1.18e-15,45;CL:0000071,6.83e-15,18;CL:0002546,6.83e-15,18;CL:0000213,3.99e-13,58;CL:0000215,3.99e-13,58;CL:1000413,1.11e-07,9;CL:0005020,7.46e-07,6;CL:0002138,7.46e-07,6;CL:0005022,7.46e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;5.52e-15;18!CL:0005022;9.60e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.14e-20!115;UBERON:0004111!6.28e-15!241;UBERON:0000025!2.00e-13!194;UBERON:0000477!2.58e-13!286;UBERON:0000487!1.20e-11!22;UBERON:0001986!1.35e-10!18;UBERON:0004638!1.35e-10!18;UBERON:0004852!1.35e-10!18;UBERON:0000073!2.51e-10!94;UBERON:0001016!2.51e-10!94;UBERON:0005743!2.66e-10!86;UBERON:0001017!6.35e-10!82;UBERON:0006914!1.17e-09!25;UBERON:0000119!4.85e-08!312;UBERON:0000483!5.53e-08!309;UBERON:0001049!1.73e-07!57;UBERON:0005068!1.73e-07!57;UBERON:0006241!1.73e-07!57;UBERON:0007135!1.73e-07!57;UBERON:0000955!3.10e-07!69;UBERON:0006238!3.10e-07!69;UBERON:0003075!4.87e-07!86;UBERON:0007284!4.87e-07!86;UBERON:0002616!8.56e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;1.69e-16;22!UBERON:0004638;5.52e-15;18!UBERON:0001986;5.52e-15;18!UBERON:0004852;5.52e-15;18!UBERON:0006914;1.67e-13;25!UBERON:0000490;1.27e-09;33!UBERON:0003915;1.05e-07;9!UBERON:0004700;1.05e-07;9!UBERON:0001917;1.05e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.62e-19,114;UBERON:0000487,1.93e-16,22;UBERON:0004638,6.83e-15,18;UBERON:0001986,6.83e-15,18;UBERON:0004852,6.83e-15,18;UBERON:0004111,6.93e-15,240;UBERON:0000025,6.22e-14,192;UBERON:0006914,1.84e-13,25;UBERON:0001017,6.68e-09,81;UBERON:0001016,1.41e-08,89;UBERON:0011216,5.82e-08,223;UBERON:0003915,1.11e-07,9;UBERON:0004700,1.11e-07,9;UBERON:0001917,1.11e-07,9;UBERON:0000483,1.15e-07,306;UBERON:0001049,2.17e-07,56;UBERON:0005068,2.17e-07,56;UBERON:0006241,2.17e-07,56;UBERON:0007135,2.17e-07,56;UBERON:0000119,2.48e-07,309;UBERON:0000055,2.82e-07,68;UBERON:0003914,6.66e-07,117;UBERON:0000073,8.57e-07,53;UBERON:0002616,8.57e-07,53;UBERON:0003075,8.91e-07,82;UBERON:0007284,8.91e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.47440361900905,0,0,0,1.11389717664042,0.994192127183747,0,0.602694528023977,0,0.487932798790507,0.123121058076788,0.204000691244253,0.940364164434263,0,0,0,0.152826811495903,0.0821005894499457,0.236132343941038,0.786728553697808,1.15148819429164,0.464448369948228,0.919421224478927,0.6024118375565,0,0.232401601740905,0.142169232487422,0.293600439334847,0.553995408531877,0.200544447470142,0.434021741431704,0.223915474239924,0.647787332037959,0,0.290796477559129,0.377875943688809,0.242584061187816,0,0,0.309706370895104,0,0.512321413058201,0,0,0.645484683583826,0,0,0,0.449446968890169,0.306083892370903,0.320929027076094,0.639337125799041,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0,0,0,0,1.26753171787165,0.637812899895131,0.209658645508376,0,0.600707571366025,0.16072558669708,1.14005097496499,0.79566670879636,0.365328307529268,1.75996244461323,2.73069305631066,0,0,0.400395987036012,0.574752439954483,0,1.90810750907073,1.1384259382189,0.587237189370939,0,1.32171328579026,0.560508562981536,0.263384084775077,0.196709770113833,0.786021525498329,0,0.501559486172034,0.32592226663359,0,0,1.22551502573691,0.883817722424512,0.221533894583621,0.270803863765016,0.768547918354051,0.520237390239513,0.493313713811028,0.552700035571697,0,0.889719378972363,0.267540828089713,1.04535523804977,1.0197840842781,1.53288197440768,0.68725489096526,1.01207876807801,0.637130828648193,0.651083453856419,0,1.20460095262218,0.511946444617674,0,0.473554504088034,4.10563998460523,0.604820229674197,1.06976078313403,0.289648807765598,2.43806866313962,0.670700859703636,0,0,0,0.724232594804119,0,0,0.0945348171640679,0.443458794925128,0.087834785693126,2.0956652079634,1.09288586487763,0,2.27183175558278,0.870648686496336,1.86141144726411,1.19245312152671,1.14398982156026,0,4.17401055470081,1.72046919021225,3.81854551768354,5.08777147731609,5.03399323451887,2.20094433552054,2.08994966536811,5.16833518338658,3.91342888955381,5.69025041699939,2.41697590265488,2.28081631715554,4.14905497831888,1.47065232138347,2.43042584364528,4.46498641420399,5.61323431565425,2.70267553159973,6.13266549863533,6.6448596169769,2.19842092716489,0,0,0.436094052142534,0,0.506522046658319,0,0.286836620748814,0.354668382198357,1.12135520028461,0,1.48000529050296,0.933633106199299,1.0776853765575,0.817309515567294,0.302714855289863,1.15235184896,0,0.312160076830321,0,0,0.587172493218824,0,0.280901613404497,0,0.491337269247072,0,0,0.494533858557114,0,0,0,0.875829639103749,0,0.438977620880838,0,0.150238058906597,1.13432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.818238361772504,0.286804595389004,2.6834215348511,2.51806559810822,1.97529702878181,1.34759371519982,2.77552935963191,2.18986415445498,0,0,0,0,0,0.118306800039844,0,0.482022059766964,0,0,0,0.134831308160164,0.196221465125346,0,2.95262181849859,5.60967095213783,0,0,0,16.7080626835196,4.72631925345123,0.441463099414651,1.47586126251736,0.514703430895577,1.97550513735526,0,0.201057944823262,0.370353780634118,0,0,0,0,0.587043471179108,3.46479474626577,2.77791307545966,5.13686211033415,0,0,0,0,0,2.81201501960331,2.01578553838631,1.13420077793909,0.447792613514241,0,1.53353071666084,1.47798971368783,1.14462964217194,0.414656231081544,0.720599767084807,1.00993946741104,1.58744735730423,1.90994212779139,2.34434894420094,0,2.05654985406647,2.10240140490742,1.14330573052231,0.672786506072164,0.43596006883328,0.4400297149257,0.775630294546667,0,0.845302752556,0,0,0.257207374262142,0,0,0,0,0,0.325736184293735,0.355391948742546,0,2.71295439353627,0.871533458600294,3.19913571782583,1.2162378064119,0.502257091432126,2.10833939483032,0.718874566474748,1.14861935834114,0,0,0.205476322550383,0,0.112085143993527,1.18218456121156,0.862510299438069,0.641715181398742,1.27047312111232,1.30139853857622,0,2.34522771468088,2.55175500661265,0,0,0.414415513436035,1.34960640891054,0,0.542530047399471,0,0.178428988797162,0.157702415033935,0.117141414992713,0.601892199455438,2.27407504055985,0,0,0.184369168541703,0,1.17480694477644,0.686286847621712,0.413536052245775,0.215714200818617,0.853820462427555,0,0,0,0,0,0,0.384417447767103,0,0.160853921143607,1.48418066444991,0,0,0,0,0,1.20859449591622,1.80455823272956,0.736647911487171,0,0.364182336013434,0.655622074797121,0.902399225814824,0.231046011313244,0,0,0.73886140225013,3.4120015221269,1.87103075804167,2.37507507712353,4.62681758070868,2.16757150035082,3.01013864312912,0.254876273045038,0,0.671624264166535,0.219259876645935,0.261435451024901,1.02580050046556,4.26419039409617,0,1.64865618636356,0,0,1.72279661398852,1.30012049207304,1.6068392984416,0.290012154876366,0,0,0.137836572484531,0,0.145016693914229,0.426133137080504,0.534192213880424,0.661139661443912,0.768760269460425,0,0.6069466851333,0.929691098594572,0,0,0.924100740528266,0.532306030317022,0,0.37064843820784,0.858749320451947,0.744316738719335,0.632758849437452,0.571890581771475,0.255897791311334,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0.54599964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| ||
|short_description=p5@ST6GAL1 | |||
}} | }} |
Latest revision as of 05:56, 17 September 2015
Short description: | p5@ST6GAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ST6GAL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000468614, uc003frb.2, uc003frc.2_5end |
EntrezGene: | ST6GAL1 |
HGNC: | 10860 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.67e-20 | 24 |
endothelial cell | 7.86e-20 | 36 |
meso-epithelial cell | 1.18e-15 | 45 |
blood vessel endothelial cell | 6.83e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.83e-15 | 18 |
lining cell | 3.99e-13 | 58 |
barrier cell | 3.99e-13 | 58 |
endothelial cell of artery | 1.11e-07 | 9 |
lymphangioblast | 7.46e-07 | 6 |
endothelial cell of lymphatic vessel | 7.46e-07 | 6 |
vascular lymphangioblast | 7.46e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.62e-19 | 114 |
simple squamous epithelium | 1.93e-16 | 22 |
blood vessel endothelium | 6.83e-15 | 18 |
endothelium | 6.83e-15 | 18 |
cardiovascular system endothelium | 6.83e-15 | 18 |
anatomical conduit | 6.93e-15 | 240 |
tube | 6.22e-14 | 192 |
squamous epithelium | 1.84e-13 | 25 |
central nervous system | 6.68e-09 | 81 |
nervous system | 1.41e-08 | 89 |
organ system subdivision | 5.82e-08 | 223 |
endothelial tube | 1.11e-07 | 9 |
arterial system endothelium | 1.11e-07 | 9 |
endothelium of artery | 1.11e-07 | 9 |
epithelium | 1.15e-07 | 306 |
neural tube | 2.17e-07 | 56 |
neural rod | 2.17e-07 | 56 |
future spinal cord | 2.17e-07 | 56 |
neural keel | 2.17e-07 | 56 |
cell layer | 2.48e-07 | 309 |
vessel | 2.82e-07 | 68 |
epithelial tube | 6.66e-07 | 117 |
regional part of nervous system | 8.57e-07 | 53 |
regional part of brain | 8.57e-07 | 53 |
neural plate | 8.91e-07 | 82 |
presumptive neural plate | 8.91e-07 | 82 |