FFCP PHASE1:Hg19::chr8:18711866..18711911,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23362 | |EntrezGene=23362 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19093 | |HGNC=19093 | ||
|TSSclassifier=strong | |||
|UniProt=E5RJE4 | |UniProt=E5RJE4 | ||
|association_with_transcript=0bp_to_ENST00000519851_5end | |association_with_transcript=0bp_to_ENST00000519851_5end | ||
|cluster_id=chr8:18711866..18711911,- | |||
|description=CAGE_peak_9_at_PSD3_5end | |description=CAGE_peak_9_at_PSD3_5end | ||
|id=chr8:18711866..18711911,- | |id=chr8:18711866..18711911,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.13e-31!115;UBERON:0001049!5.55e-18!57;UBERON:0005068!5.55e-18!57;UBERON:0006241!5.55e-18!57;UBERON:0007135!5.55e-18!57;UBERON:0002616!1.04e-17!59;UBERON:0003075!1.87e-17!86;UBERON:0007284!1.87e-17!86;UBERON:0002346!4.78e-17!90;UBERON:0001017!7.63e-17!82;UBERON:0005743!1.40e-16!86;UBERON:0002780!1.85e-16!41;UBERON:0001890!1.85e-16!41;UBERON:0006240!1.85e-16!41;UBERON:0000955!2.68e-16!69;UBERON:0006238!2.68e-16!69;UBERON:0003080!1.07e-15!42;UBERON:0000073!3.27e-14!94;UBERON:0001016!3.27e-14!94;UBERON:0003056!4.86e-14!61;UBERON:0001893!4.72e-13!34;UBERON:0002020!1.06e-12!34;UBERON:0003528!1.06e-12!34;UBERON:0002791!1.64e-12!33;UBERON:0001869!1.14e-11!32;UBERON:0000153!2.96e-11!129;UBERON:0007811!2.96e-11!129;UBERON:0000033!1.15e-10!123;UBERON:0000956!5.69e-10!25;UBERON:0000203!5.69e-10!25;UBERON:0002619!5.60e-09!22;UBERON:0000062!2.00e-08!511;UBERON:0004121!2.02e-08!169;UBERON:0000924!2.08e-08!173;UBERON:0006601!2.08e-08!173;UBERON:0001950!2.87e-08!20 | |ontology_enrichment_uberon=UBERON:0007023!3.13e-31!115;UBERON:0001049!5.55e-18!57;UBERON:0005068!5.55e-18!57;UBERON:0006241!5.55e-18!57;UBERON:0007135!5.55e-18!57;UBERON:0002616!1.04e-17!59;UBERON:0003075!1.87e-17!86;UBERON:0007284!1.87e-17!86;UBERON:0002346!4.78e-17!90;UBERON:0001017!7.63e-17!82;UBERON:0005743!1.40e-16!86;UBERON:0002780!1.85e-16!41;UBERON:0001890!1.85e-16!41;UBERON:0006240!1.85e-16!41;UBERON:0000955!2.68e-16!69;UBERON:0006238!2.68e-16!69;UBERON:0003080!1.07e-15!42;UBERON:0000073!3.27e-14!94;UBERON:0001016!3.27e-14!94;UBERON:0003056!4.86e-14!61;UBERON:0001893!4.72e-13!34;UBERON:0002020!1.06e-12!34;UBERON:0003528!1.06e-12!34;UBERON:0002791!1.64e-12!33;UBERON:0001869!1.14e-11!32;UBERON:0000153!2.96e-11!129;UBERON:0007811!2.96e-11!129;UBERON:0000033!1.15e-10!123;UBERON:0000956!5.69e-10!25;UBERON:0000203!5.69e-10!25;UBERON:0002619!5.60e-09!22;UBERON:0000062!2.00e-08!511;UBERON:0004121!2.02e-08!169;UBERON:0000924!2.08e-08!173;UBERON:0006601!2.08e-08!173;UBERON:0001950!2.87e-08!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.34e-11;41!UBERON:0001890;5.34e-11;41!UBERON:0001893;1.90e-09;34!UBERON:0003528;9.72e-09;34!UBERON:0002020;9.72e-09;34!UBERON:0007023;1.12e-08;114!UBERON:0000073;1.70e-08;53!UBERON:0002616;1.70e-08;53!UBERON:0001869;2.70e-08;32!UBERON:0002791;2.83e-08;32!UBERON:0002619;8.14e-08;22!UBERON:0000956;1.39e-07;25!UBERON:0000203;1.39e-07;25!UBERON:0001950;1.94e-07;20 | |ontology_enrichment_uberon_v019=UBERON:0002780;5.34e-11;41!UBERON:0001890;5.34e-11;41!UBERON:0001893;1.90e-09;34!UBERON:0003528;9.72e-09;34!UBERON:0002020;9.72e-09;34!UBERON:0007023;1.12e-08;114!UBERON:0000073;1.70e-08;53!UBERON:0002616;1.70e-08;53!UBERON:0001869;2.70e-08;32!UBERON:0002791;2.83e-08;32!UBERON:0002619;8.14e-08;22!UBERON:0000956;1.39e-07;25!UBERON:0000203;1.39e-07;25!UBERON:0001950;1.94e-07;20 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.40e-29,114;UBERON:0003075,1.36e-20,82;UBERON:0007284,1.36e-20,82;UBERON:0002346,3.49e-20,86;UBERON:0001049,5.23e-18,56;UBERON:0005068,5.23e-18,56;UBERON:0006241,5.23e-18,56;UBERON:0007135,5.23e-18,56;UBERON:0010314,8.86e-16,132;UBERON:0003056,1.06e-15,61;UBERON:0000073,2.25e-15,53;UBERON:0002616,2.25e-15,53;UBERON:0010371,2.62e-15,104;UBERON:0002780,9.24e-15,41;UBERON:0001890,9.24e-15,41;UBERON:0003080,9.24e-15,41;UBERON:0006240,9.24e-15,41;UBERON:0001017,1.88e-14,81;UBERON:0001016,7.23e-13,89;UBERON:0000955,1.22e-12,68;UBERON:0006238,1.22e-12,68;UBERON:0001893,2.11e-11,34;UBERON:0003528,5.76e-11,34;UBERON:0002020,5.76e-11,34;UBERON:0004121,9.63e-10,171;UBERON:0000924,9.63e-10,171;UBERON:0006601,9.63e-10,171;UBERON:0002791,1.21e-09,32;UBERON:0001869,1.77e-09,32;UBERON:0002619,5.50e-08,22;UBERON:0000956,9.81e-08,25;UBERON:0000203,9.81e-08,25;UBERON:0001950,1.24e-07,20 | |||
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| ||
|short_description=p9@PSD3 | |short_description=p9@PSD3 | ||
}} | }} |
Latest revision as of 06:41, 17 September 2015
Short description: | p9@PSD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PSD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000519851_5end |
EntrezGene: | PSD3 |
HGNC: | 19093 |
UniProt: | E5RJE4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.40e-29 | 114 |
neural plate | 1.36e-20 | 82 |
presumptive neural plate | 1.36e-20 | 82 |
neurectoderm | 3.49e-20 | 86 |
neural tube | 5.23e-18 | 56 |
neural rod | 5.23e-18 | 56 |
future spinal cord | 5.23e-18 | 56 |
neural keel | 5.23e-18 | 56 |
structure with developmental contribution from neural crest | 8.86e-16 | 132 |
pre-chordal neural plate | 1.06e-15 | 61 |
regional part of nervous system | 2.25e-15 | 53 |
regional part of brain | 2.25e-15 | 53 |
ecto-epithelium | 2.62e-15 | 104 |
regional part of forebrain | 9.24e-15 | 41 |
forebrain | 9.24e-15 | 41 |
anterior neural tube | 9.24e-15 | 41 |
future forebrain | 9.24e-15 | 41 |
central nervous system | 1.88e-14 | 81 |
nervous system | 7.23e-13 | 89 |
brain | 1.22e-12 | 68 |
future brain | 1.22e-12 | 68 |
telencephalon | 2.11e-11 | 34 |
brain grey matter | 5.76e-11 | 34 |
gray matter | 5.76e-11 | 34 |
ectoderm-derived structure | 9.63e-10 | 171 |
ectoderm | 9.63e-10 | 171 |
presumptive ectoderm | 9.63e-10 | 171 |
regional part of telencephalon | 1.21e-09 | 32 |
cerebral hemisphere | 1.77e-09 | 32 |
regional part of cerebral cortex | 5.50e-08 | 22 |
cerebral cortex | 9.81e-08 | 25 |
pallium | 9.81e-08 | 25 |
neocortex | 1.24e-07 | 20 |