FFCP PHASE1:Hg19::chr15:35087070..35087134,-: Difference between revisions
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|id=chr15:35087070..35087134,-
|short_description=p2@ACTC1
|description=CAGE_peak_2_at_ACTC1_5end
|association_with_transcript=-61bp_to_AB590199,CR541795,CU679551,D...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=70 | |EntrezGene=70 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=143 | |HGNC=143 | ||
|TSSclassifier=strong | |||
|UniProt=P68032 | |UniProt=P68032 | ||
|association_with_transcript=-61bp_to_AB590199,CR541795,CU679551,DQ893096,DQ896369_5end | |||
|cluster_id=chr15:35087070..35087134,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_2_at_ACTC1_5end | |||
|id=chr15:35087070..35087134,- | |||
|ontology_enrichment_celltype=CL:0000188!9.15e-10!9 | |||
|ontology_enrichment_celltype_v019=CL:0002580;7.88e-10;3!CL:0000515;1.09e-09;3!CL:0002620;1.50e-08;23!CL:0002334;5.17e-08;12!CL:0000056;2.38e-07;4!CL:0000680;7.68e-07;7!CL:0002617;9.41e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,8.48e-10,3;CL:0002620,1.44e-08,23;CL:0002334,5.48e-08,12;CL:0000515,2.35e-07,4;CL:0002617,9.55e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.27e-07;4!UBERON:0007284;1.27e-07;4!CL:0000515;2.38e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.47e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.47e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.89e-17!115;UBERON:0003688!5.23e-07!6;UBERON:0002358!5.23e-07!6;UBERON:0003684!5.23e-07!6;UBERON:0001178!5.23e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.28e-12;16!UBERON:0002036;1.28e-12;16!UBERON:0004457;2.30e-10;9!UBERON:0000042;2.30e-10;9!UBERON:0004151;3.49e-10;3!UBERON:0003978;4.63e-10;3!UBERON:0000946;4.63e-10;3!UBERON:0007100;1.35e-08;25!UBERON:0006947;2.55e-08;3!UBERON:0004054;2.55e-08;3!UBERON:0003688;1.00e-07;6!UBERON:0002358;1.00e-07;6!UBERON:0003684;1.00e-07;6!UBERON:0001178;1.00e-07;6!UBERON:0002081;2.95e-07;2!UBERON:0000310;3.07e-07;10!UBERON:0002133;3.69e-07;2!UBERON:0002385;4.68e-07;31!UBERON:0001015;4.68e-07;31!UBERON:0000383;4.68e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,3.49e-10,3;UBERON:0003978,4.57e-10,3;UBERON:0009751,4.57e-10,3;UBERON:0000946,4.57e-10,3;UBERON:0002523,4.57e-10,3;UBERON:0005983,4.57e-10,3;UBERON:0002165,4.57e-10,3;UBERON:0002062,4.57e-10,3;UBERON:0007280,4.57e-10,3;UBERON:0007023,4.83e-10,114;UBERON:0006947,2.36e-08,3;UBERON:0004054,2.36e-08,3;UBERON:0007100,7.97e-08,27;UBERON:0003688,1.06e-07,6;UBERON:0002358,1.06e-07,6;UBERON:0003684,1.06e-07,6;UBERON:0001178,1.06e-07,6;UBERON:0004457,1.35e-07,12;UBERON:0000042,1.35e-07,12;UBERON:0002081,2.95e-07,2;UBERON:0010227,2.95e-07,2;UBERON:0000310,3.19e-07,10;UBERON:0002133,3.64e-07,2 | |||
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| ||
|short_description=p2@ACTC1 | |||
}} | }} |
Latest revision as of 07:31, 17 September 2015
Short description: | p2@ACTC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ACTC1_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -61bp_to_AB590199, CR541795, CU679551, DQ893096, DQ896369_5end |
EntrezGene: | ACTC1 |
HGNC: | 143 |
UniProt: | P68032 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 8.48e-10 | 3 |
skin fibroblast | 1.44e-08 | 23 |
preadipocyte | 5.48e-08 | 12 |
skeletal muscle myoblast | 2.35e-07 | 4 |
adipocyte of breast | 9.55e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 3.49e-10 | 3 |
valve | 4.57e-10 | 3 |
cardiac mesenchyme | 4.57e-10 | 3 |
cardial valve | 4.57e-10 | 3 |
tunica intima | 4.57e-10 | 3 |
heart layer | 4.57e-10 | 3 |
endocardium | 4.57e-10 | 3 |
endocardial cushion | 4.57e-10 | 3 |
presumptive endocardium | 4.57e-10 | 3 |
adult organism | 4.83e-10 | 114 |
male genital duct | 2.36e-08 | 3 |
internal male genitalia | 2.36e-08 | 3 |
primary circulatory organ | 7.97e-08 | 27 |
omentum | 1.06e-07 | 6 |
peritoneum | 1.06e-07 | 6 |
abdominal cavity | 1.06e-07 | 6 |
visceral peritoneum | 1.06e-07 | 6 |
cavity lining | 1.35e-07 | 12 |
serous membrane | 1.35e-07 | 12 |
cardiac atrium | 2.95e-07 | 2 |
future cardiac atrium | 2.95e-07 | 2 |
breast | 3.19e-07 | 10 |
atrioventricular valve | 3.64e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.47e-07 | 2 |