FFCP PHASE1:Hg19::chr10:15210615..15210654,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:15210615..15210654,-
|short_description=p2@NMT2
|description=CAGE_peak_2_at_NMT2_5end
|association_with_transcript=0bp_to_ENST00000378143,ENST00000378150,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9397 | |EntrezGene=9397 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7858 | |HGNC=7858 | ||
|UniProt=Q5VUC7, | |TSSclassifier=strong | ||
|UniProt=Q5VUC7,Q5VUC6,E9PE74 | |||
|association_with_transcript=0bp_to_ENST00000378143,ENST00000378150,ENST00000441445_5end | |||
|cluster_id=chr10:15210615..15210654,- | |||
|description=CAGE_peak_2_at_NMT2_5end | |||
|id=chr10:15210615..15210654,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.85e-14!115;UBERON:0004111!3.41e-10!241;UBERON:0000073!8.46e-10!94;UBERON:0001016!8.46e-10!94;UBERON:0000955!8.66e-10!69;UBERON:0006238!8.66e-10!69;UBERON:0001017!9.37e-10!82;UBERON:0001049!1.23e-09!57;UBERON:0005068!1.23e-09!57;UBERON:0006241!1.23e-09!57;UBERON:0007135!1.23e-09!57;UBERON:0005743!1.26e-09!86;UBERON:0002780!1.54e-09!41;UBERON:0001890!1.54e-09!41;UBERON:0006240!1.54e-09!41;UBERON:0002619!1.84e-09!22;UBERON:0000477!2.47e-09!286;UBERON:0003080!4.43e-09!42;UBERON:0001869!5.94e-09!32;UBERON:0002616!8.15e-09!59;UBERON:0001950!1.61e-08!20;UBERON:0001893!1.66e-08!34;UBERON:0000956!1.85e-08!25;UBERON:0000203!1.85e-08!25;UBERON:0000025!2.29e-08!194;UBERON:0002020!2.54e-08!34;UBERON:0003528!2.54e-08!34;UBERON:0002791!2.71e-08!33;UBERON:0000475!3.27e-08!365;UBERON:0003075!3.43e-08!86;UBERON:0007284!3.43e-08!86;UBERON:0000153!1.32e-07!129;UBERON:0007811!1.32e-07!129;UBERON:0000033!5.81e-07!123;UBERON:0000119!8.38e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.56e-09;22!UBERON:0000956;1.38e-08;25!UBERON:0000203;1.38e-08;25!UBERON:0001950;1.39e-08;20!UBERON:0001869;2.75e-08;32!UBERON:0002791;8.99e-08;32!UBERON:0001893;1.11e-07;34!UBERON:0003528;1.33e-07;34!UBERON:0002020;1.33e-07;34!UBERON:0002780;4.37e-07;41!UBERON:0001890;4.37e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.06e-13,114;UBERON:0001016,3.37e-10,89;UBERON:0000955,3.89e-10,68;UBERON:0006238,3.89e-10,68;UBERON:0004111,4.08e-10,240;UBERON:0001017,4.59e-10,81;UBERON:0001049,4.98e-10,56;UBERON:0005068,4.98e-10,56;UBERON:0006241,4.98e-10,56;UBERON:0007135,4.98e-10,56;UBERON:0000073,1.51e-09,53;UBERON:0002616,1.51e-09,53;UBERON:0002780,1.53e-09,41;UBERON:0001890,1.53e-09,41;UBERON:0003080,1.53e-09,41;UBERON:0006240,1.53e-09,41;UBERON:0002619,1.83e-09,22;UBERON:0001869,5.92e-09,32;UBERON:0010314,1.38e-08,132;UBERON:0001950,1.61e-08,20;UBERON:0001893,1.66e-08,34;UBERON:0000956,1.84e-08,25;UBERON:0000203,1.84e-08,25;UBERON:0002791,2.52e-08,32;UBERON:0003528,2.53e-08,34;UBERON:0002020,2.53e-08,34;UBERON:0000025,2.90e-08,192;UBERON:0003075,3.34e-08,82;UBERON:0007284,3.34e-08,82;UBERON:0011216,6.21e-08,223;UBERON:0000119,9.07e-07,309 | |||
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| ||
|short_description=p2@NMT2 | |||
}} | }} |
Latest revision as of 08:25, 17 September 2015
Short description: | p2@NMT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NMT2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000378143, ENST00000378150, ENST00000441445_5end |
EntrezGene: | NMT2 |
HGNC: | 7858 |
UniProt: | Q5VUC7Q5VUC6E9PE74 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.06e-13 | 114 |
nervous system | 3.37e-10 | 89 |
brain | 3.89e-10 | 68 |
future brain | 3.89e-10 | 68 |
anatomical conduit | 4.08e-10 | 240 |
central nervous system | 4.59e-10 | 81 |
neural tube | 4.98e-10 | 56 |
neural rod | 4.98e-10 | 56 |
future spinal cord | 4.98e-10 | 56 |
neural keel | 4.98e-10 | 56 |
regional part of nervous system | 1.51e-09 | 53 |
regional part of brain | 1.51e-09 | 53 |
regional part of forebrain | 1.53e-09 | 41 |
forebrain | 1.53e-09 | 41 |
anterior neural tube | 1.53e-09 | 41 |
future forebrain | 1.53e-09 | 41 |
regional part of cerebral cortex | 1.83e-09 | 22 |
cerebral hemisphere | 5.92e-09 | 32 |
structure with developmental contribution from neural crest | 1.38e-08 | 132 |
neocortex | 1.61e-08 | 20 |
telencephalon | 1.66e-08 | 34 |
cerebral cortex | 1.84e-08 | 25 |
pallium | 1.84e-08 | 25 |
regional part of telencephalon | 2.52e-08 | 32 |
brain grey matter | 2.53e-08 | 34 |
gray matter | 2.53e-08 | 34 |
tube | 2.90e-08 | 192 |
neural plate | 3.34e-08 | 82 |
presumptive neural plate | 3.34e-08 | 82 |
organ system subdivision | 6.21e-08 | 223 |
cell layer | 9.07e-07 | 309 |