FFCP PHASE1:Hg19::chr10:15210709..15210723,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9397 | |EntrezGene=9397 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7858 | |HGNC=7858 | ||
|TSSclassifier=strong | |||
|UniProt=O60551,Q5VUC6 | |UniProt=O60551,Q5VUC6 | ||
|association_with_transcript=-14bp_to_NM_004808,uc001inz.1,uc001ioa.1,uc009xjo.1_5end | |association_with_transcript=-14bp_to_NM_004808,uc001inz.1,uc001ioa.1,uc009xjo.1_5end | ||
|cluster_id=chr10:15210709..15210723,- | |||
|description=CAGE_peak_3_at_NMT2_5end | |description=CAGE_peak_3_at_NMT2_5end | ||
|id=chr10:15210709..15210723,- | |id=chr10:15210709..15210723,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!1.21e-08!32;UBERON:0000475!1.89e-08!365;UBERON:0002020!4.66e-08!34;UBERON:0003528!4.66e-08!34;UBERON:0001017!6.17e-08!82;UBERON:0001049!6.71e-08!57;UBERON:0005068!6.71e-08!57;UBERON:0006241!6.71e-08!57;UBERON:0007135!6.71e-08!57;UBERON:0000119!7.63e-08!312;UBERON:0000955!1.06e-07!69;UBERON:0006238!1.06e-07!69;UBERON:0001893!1.12e-07!34;UBERON:0003056!1.57e-07!61;UBERON:0003075!1.70e-07!86;UBERON:0007284!1.70e-07!86;UBERON:0003080!1.89e-07!42;UBERON:0002791!1.97e-07!33;UBERON:0000477!2.40e-07!286;UBERON:0000483!2.45e-07!309;UBERON:0005743!2.64e-07!86;UBERON:0002616!2.97e-07!59;UBERON:0000033!3.00e-07!123;UBERON:0002780!3.51e-07!41;UBERON:0001890!3.51e-07!41;UBERON:0006240!3.51e-07!41;UBERON:0000153!5.52e-07!129;UBERON:0007811!5.52e-07!129;UBERON:0002619!6.18e-07!22;UBERON:0002346!9.43e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.68e-07;32!UBERON:0002791;5.01e-07;32!UBERON:0001893;8.30e-07;34!UBERON:0003528;9.47e-07;34!UBERON:0002020;9.47e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.76e-09,32;UBERON:0002791,1.29e-08,32;UBERON:0001893,1.78e-08,34;UBERON:0003528,1.92e-08,34;UBERON:0002020,1.92e-08,34;UBERON:0002780,1.02e-07,41;UBERON:0001890,1.02e-07,41;UBERON:0003080,1.02e-07,41;UBERON:0006240,1.02e-07,41;UBERON:0003056,1.42e-07,61;UBERON:0001049,1.66e-07,56;UBERON:0005068,1.66e-07,56;UBERON:0006241,1.66e-07,56;UBERON:0007135,1.66e-07,56;UBERON:0000073,3.07e-07,53;UBERON:0002616,3.07e-07,53;UBERON:0001950,3.32e-07,20;UBERON:0003075,3.35e-07,82;UBERON:0007284,3.35e-07,82;UBERON:0001017,3.52e-07,81;UBERON:0002619,4.52e-07,22 | |||
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| ||
|short_description=p3@NMT2 | |short_description=p3@NMT2 | ||
}} | }} |
Latest revision as of 08:29, 17 September 2015
Short description: | p3@NMT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NMT2_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_NM_004808, uc001inz.1, uc001ioa.1, uc009xjo.1_5end |
EntrezGene: | NMT2 |
HGNC: | 7858 |
UniProt: | O60551Q5VUC6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 1.76e-09 | 32 |
regional part of telencephalon | 1.29e-08 | 32 |
telencephalon | 1.78e-08 | 34 |
brain grey matter | 1.92e-08 | 34 |
gray matter | 1.92e-08 | 34 |
regional part of forebrain | 1.02e-07 | 41 |
forebrain | 1.02e-07 | 41 |
anterior neural tube | 1.02e-07 | 41 |
future forebrain | 1.02e-07 | 41 |
pre-chordal neural plate | 1.42e-07 | 61 |
neural tube | 1.66e-07 | 56 |
neural rod | 1.66e-07 | 56 |
future spinal cord | 1.66e-07 | 56 |
neural keel | 1.66e-07 | 56 |
regional part of nervous system | 3.07e-07 | 53 |
regional part of brain | 3.07e-07 | 53 |
neocortex | 3.32e-07 | 20 |
neural plate | 3.35e-07 | 82 |
presumptive neural plate | 3.35e-07 | 82 |
central nervous system | 3.52e-07 | 81 |
regional part of cerebral cortex | 4.52e-07 | 22 |