FFCP PHASE1:Hg19::chr1:28212426..28212437,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:28212426..28212437,+
|short_description=p10@C1orf38
|description=CAGE_peak_10_at_C1orf38_5end
|association_with_transcript=0bp_to_AF323721_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9473 | |EntrezGene=9473 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=16839 | |HGNC=16839 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AF323721_5end | |||
|cluster_id=chr1:28212426..28212437,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_10_at_C1orf38_5end | |||
|id=chr1:28212426..28212437,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.79e-53!42;CL:0000766!1.37e-51!76;CL:0000860!2.58e-49!45;CL:0002194!4.88e-42!63;CL:0000576!4.88e-42!63;CL:0000040!4.88e-42!63;CL:0000559!4.88e-42!63;CL:0002009!1.82e-40!65;CL:0000839!2.93e-39!70;CL:0000763!5.71e-39!112;CL:0000049!5.71e-39!112;CL:0000557!1.42e-38!71;CL:0000738!1.50e-30!140;CL:0000037!5.63e-28!172;CL:0000566!5.63e-28!172;CL:0000988!9.86e-26!182;CL:0002032!6.48e-24!165;CL:0000837!6.48e-24!165;CL:0002087!1.09e-23!119;CL:0002031!2.36e-19!124;CL:0002393!4.49e-15!9;CL:0002397!4.49e-15!9;CL:0000094!3.63e-13!8;CL:0000081!2.44e-09!11;CL:0000842!3.74e-09!3;CL:0000134!1.35e-07!358;CL:0000771!2.33e-07!2;CL:0002320!3.14e-07!365;CL:0000224!6.00e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000771;3.14e-28;2!CL:0000094;2.10e-27;8!CL:0002393;2.67e-20;6!CL:0002397;2.67e-20;6!CL:0000081;4.90e-20;11!CL:0000775;5.29e-19;3!CL:0000576;1.37e-12;48!CL:0000766;9.73e-12;69!CL:0000860;3.78e-09;33!CL:0002057;3.78e-09;33!CL:0000047;6.80e-08;2!CL:0000473;6.31e-07;39!CL:0000234;6.31e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,3.14e-28,2;CL:0000094,2.18e-27,8;CL:0000766,8.67e-25,72;CL:0000081,5.02e-20,11;CL:0000860,2.98e-19,42;CL:0002057,2.98e-19,42;CL:0000775,5.54e-19,3;CL:0000473,9.24e-17,48;CL:0000234,9.24e-17,48;CL:0000763,3.61e-16,108;CL:0000049,3.61e-16,108;CL:0002393,6.74e-14,9;CL:0002397,6.74e-14,9;CL:0002194,2.89e-13,59;CL:0000576,2.89e-13,59;CL:0000040,2.89e-13,59;CL:0000559,2.89e-13,59;CL:0002009,8.18e-13,61;CL:0000738,1.40e-12,136;CL:0000839,8.41e-12,66;CL:0000557,1.29e-11,67;CL:0002032,2.04e-10,161;CL:0000837,2.04e-10,161;CL:0000037,6.34e-10,168;CL:0000988,2.39e-09,177 | |||
|ontology_enrichment_development_v019=CL:0002057;3.10e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.59e-48!102;UBERON:0003061!2.59e-48!102;UBERON:0002193!6.59e-45!112;UBERON:0002371!2.28e-35!80;UBERON:0001474!3.50e-34!86;UBERON:0004765!1.23e-27!101;UBERON:0001434!1.23e-27!101;UBERON:0002405!1.29e-27!115;UBERON:0003081!2.13e-16!216;UBERON:0002204!7.85e-14!167;UBERON:0000178!4.23e-11!15;UBERON:0000179!4.23e-11!15;UBERON:0000463!4.23e-11!15;UBERON:0002384!9.87e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.62e-12,98;UBERON:0003061,3.62e-12,98;UBERON:0002193,6.02e-11,108;UBERON:0002371,3.60e-10,76;UBERON:0001474,2.23e-09,82;UBERON:0004765,1.75e-08,90;UBERON:0002405,3.46e-08,93;UBERON:0001434,1.46e-07,100 | |||
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| ||
|short_description=p10@C1orf38 | |||
}} | }} |
Latest revision as of 09:13, 17 September 2015
Short description: | p10@C1orf38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_C1orf38_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_AF323721_5end |
EntrezGene: | C1orf38 |
HGNC: | 16839 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 3.14e-28 | 2 |
granulocyte | 2.18e-27 | 8 |
myeloid leukocyte | 8.67e-25 | 72 |
blood cell | 5.02e-20 | 11 |
classical monocyte | 2.98e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.98e-19 | 42 |
neutrophil | 5.54e-19 | 3 |
defensive cell | 9.24e-17 | 48 |
phagocyte | 9.24e-17 | 48 |
myeloid cell | 3.61e-16 | 108 |
common myeloid progenitor | 3.61e-16 | 108 |
intermediate monocyte | 6.74e-14 | 9 |
CD14-positive, CD16-positive monocyte | 6.74e-14 | 9 |
monopoietic cell | 2.89e-13 | 59 |
monocyte | 2.89e-13 | 59 |
monoblast | 2.89e-13 | 59 |
promonocyte | 2.89e-13 | 59 |
macrophage dendritic cell progenitor | 8.18e-13 | 61 |
leukocyte | 1.40e-12 | 136 |
myeloid lineage restricted progenitor cell | 8.41e-12 | 66 |
granulocyte monocyte progenitor cell | 1.29e-11 | 67 |
hematopoietic oligopotent progenitor cell | 2.04e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.04e-10 | 161 |
hematopoietic stem cell | 6.34e-10 | 168 |
hematopoietic cell | 2.39e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.62e-12 | 98 |
blood island | 3.62e-12 | 98 |
hemolymphoid system | 6.02e-11 | 108 |
bone marrow | 3.60e-10 | 76 |
bone element | 2.23e-09 | 82 |
skeletal element | 1.75e-08 | 90 |
immune system | 3.46e-08 | 93 |
skeletal system | 1.46e-07 | 100 |