FFCP PHASE1:Hg19::chr3:189839367..189839371,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55214 | |EntrezGene=55214 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19317 | |HGNC=19317 | ||
|TSSclassifier=strong | |||
|UniProt=C9JSL4 | |UniProt=C9JSL4 | ||
|association_with_transcript=95bp_to_ENST00000426003_5end | |association_with_transcript=95bp_to_ENST00000426003_5end | ||
|cluster_id=chr3:189839367..189839371,- | |||
|coexpression_cluster_id=C137 | |||
|description=CAGE_peak_16_at_LEPREL1_5end | |description=CAGE_peak_16_at_LEPREL1_5end | ||
|id=chr3:189839367..189839371,- | |id=chr3:189839367..189839371,- | ||
|ontology_enrichment_celltype=CL:0000064!4.66e-22!3;CL:0005012!4.66e-22!3;CL:0000067!4.66e-22!3;CL:0002304!4.66e-22!3;CL:0000946!8.78e-09!1;CL:0000786!8.78e-09!1;CL:0000980!8.78e-09!1;CL:0000342!1.18e-08!1;CL:0002565!1.18e-08!1;CL:0000319!1.71e-08!1;CL:0002327!1.71e-08!4 | |ontology_enrichment_celltype=CL:0000064!4.66e-22!3;CL:0005012!4.66e-22!3;CL:0000067!4.66e-22!3;CL:0002304!4.66e-22!3;CL:0000946!8.78e-09!1;CL:0000786!8.78e-09!1;CL:0000980!8.78e-09!1;CL:0000342!1.18e-08!1;CL:0002565!1.18e-08!1;CL:0000319!1.71e-08!1;CL:0002327!1.71e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0002327;9.45e-18;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,8.69e-18,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3030!1.71e-08!1 | |ontology_enrichment_disease=DOID:3030!1.71e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:4468;5.96e-34;2!DOID:4556;2.62e-23;3!DOID:3908;1.40e-14;5!DOID:3905;1.04e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,7.05e-34,2;DOID:4556,2.62e-23,3;DOID:3908,1.40e-14,5;DOID:3905,1.04e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0000488!5.98e-29!4;UBERON:0001778!4.66e-22!3;UBERON:0001775!4.66e-22!3;UBERON:0002203!2.15e-19!6;UBERON:0001768!2.15e-19!6;UBERON:0007625!2.55e-16!11;UBERON:0005085!6.94e-15!29;UBERON:0000019!4.32e-13!19;UBERON:0000047!4.32e-13!19;UBERON:0004088!4.32e-13!19;UBERON:0003072!4.32e-13!19;UBERON:0003071!4.32e-13!19;UBERON:0004128!4.32e-13!19;UBERON:0001801!8.66e-13!14;UBERON:0000970!2.06e-12!20;UBERON:0002104!8.49e-12!21;UBERON:0001456!8.49e-12!21;UBERON:0000020!9.97e-11!23;UBERON:0002200!1.15e-10!11;UBERON:0006876!1.15e-10!11;UBERON:0002106!1.28e-10!3;UBERON:0004854!1.28e-10!3;UBERON:0009034!1.28e-10!3;UBERON:0002095!1.28e-10!3;UBERON:0004782!1.28e-10!3;UBERON:0003281!1.28e-10!3;UBERON:0009664!1.28e-10!3;UBERON:0002296!1.28e-10!3;UBERON:0005602!1.28e-10!3;UBERON:0001179!1.28e-10!3;UBERON:0006293!1.28e-10!3;UBERON:0001032!2.93e-10!24;UBERON:0004456!2.93e-10!24;UBERON:0000076!5.15e-09!8;UBERON:0002506!1.18e-08!1;UBERON:0001769!1.18e-08!1;UBERON:0000945!1.41e-08!8;UBERON:0010039!1.41e-08!8;UBERON:0001911!1.71e-08!4;UBERON:0005333!1.71e-08!4;UBERON:0008425!1.71e-08!4;UBERON:0005311!1.71e-08!4 | |ontology_enrichment_uberon=UBERON:0000488!5.98e-29!4;UBERON:0001778!4.66e-22!3;UBERON:0001775!4.66e-22!3;UBERON:0002203!2.15e-19!6;UBERON:0001768!2.15e-19!6;UBERON:0007625!2.55e-16!11;UBERON:0005085!6.94e-15!29;UBERON:0000019!4.32e-13!19;UBERON:0000047!4.32e-13!19;UBERON:0004088!4.32e-13!19;UBERON:0003072!4.32e-13!19;UBERON:0003071!4.32e-13!19;UBERON:0004128!4.32e-13!19;UBERON:0001801!8.66e-13!14;UBERON:0000970!2.06e-12!20;UBERON:0002104!8.49e-12!21;UBERON:0001456!8.49e-12!21;UBERON:0000020!9.97e-11!23;UBERON:0002200!1.15e-10!11;UBERON:0006876!1.15e-10!11;UBERON:0002106!1.28e-10!3;UBERON:0004854!1.28e-10!3;UBERON:0009034!1.28e-10!3;UBERON:0002095!1.28e-10!3;UBERON:0004782!1.28e-10!3;UBERON:0003281!1.28e-10!3;UBERON:0009664!1.28e-10!3;UBERON:0002296!1.28e-10!3;UBERON:0005602!1.28e-10!3;UBERON:0001179!1.28e-10!3;UBERON:0006293!1.28e-10!3;UBERON:0001032!2.93e-10!24;UBERON:0004456!2.93e-10!24;UBERON:0000076!5.15e-09!8;UBERON:0002506!1.18e-08!1;UBERON:0001769!1.18e-08!1;UBERON:0000945!1.41e-08!8;UBERON:0010039!1.41e-08!8;UBERON:0001911!1.71e-08!4;UBERON:0005333!1.71e-08!4;UBERON:0008425!1.71e-08!4;UBERON:0005311!1.71e-08!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001911;9.45e-18;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,8.69e-18,4;UBERON:0005333,8.69e-18,4;UBERON:0008425,8.69e-18,4;UBERON:0005311,8.69e-18,4;UBERON:0000076,1.35e-09,8;UBERON:0005153,2.82e-08,37;UBERON:0005157,9.72e-07,47 | |||
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|short_description=p16@LEPREL1 | |short_description=p16@LEPREL1 | ||
}} | }} |
Latest revision as of 09:36, 17 September 2015
Short description: | p16@LEPREL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_LEPREL1_5end |
Coexpression cluster: | C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic |
Association with transcript: | 95bp_to_ENST00000426003_5end |
EntrezGene: | LEPREL1 |
HGNC: | 19317 |
UniProt: | C9JSL4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 8.69e-18 | 4 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 8.69e-18 | 4 |
mammary bud | 8.69e-18 | 4 |
mammary ridge | 8.69e-18 | 4 |
mammary placode | 8.69e-18 | 4 |
external ectoderm | 1.35e-09 | 8 |
epithelial bud | 2.82e-08 | 37 |
epithelial fold | 9.72e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 7.05e-34 | 2 |
lung large cell carcinoma | 2.62e-23 | 3 |
non-small cell lung carcinoma | 1.40e-14 | 5 |
lung carcinoma | 1.04e-08 | 9 |