FFCP PHASE1:Hg19::chr4:25865186..25865218,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23231 | |EntrezGene=23231 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29108 | |HGNC=29108 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000264868_5end | |association_with_transcript=0bp_to_ENST00000264868_5end | ||
|cluster_id=chr4:25865186..25865218,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_8_at_SEL1L3_5end | |description=CAGE_peak_8_at_SEL1L3_5end | ||
|id=chr4:25865186..25865218,- | |id=chr4:25865186..25865218,- | ||
|ontology_enrichment_celltype=CL:1000415!8.47e-08!2 | |ontology_enrichment_celltype=CL:1000415!8.47e-08!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.75e-54;3!UBERON:0006242;2.71e-19;1 | |||
|ontology_enrichment_disease=DOID:3493!8.23e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.57e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.57e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0002294!1.04e-12!7;UBERON:0001173!1.04e-12!7;UBERON:0004912!1.04e-12!7;UBERON:0005409!3.03e-12!35;UBERON:0002110!2.19e-11!3;UBERON:0006242!2.19e-11!3;UBERON:0000160!2.29e-09!27;UBERON:0007023!1.51e-08!115;UBERON:0000059!1.75e-08!11;UBERON:0001155!6.01e-07!9 | |ontology_enrichment_uberon=UBERON:0002294!1.04e-12!7;UBERON:0001173!1.04e-12!7;UBERON:0004912!1.04e-12!7;UBERON:0005409!3.03e-12!35;UBERON:0002110!2.19e-11!3;UBERON:0006242!2.19e-11!3;UBERON:0000160!2.29e-09!27;UBERON:0007023!1.51e-08!115;UBERON:0000059!1.75e-08!11;UBERON:0001155!6.01e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.61e-27;6!UBERON:0002680;1.32e-18;9!UBERON:0001895;1.32e-18;9!UBERON:0000160;1.99e-16;17!UBERON:0002108;1.51e-15;4!UBERON:0004733;3.95e-14;12!UBERON:0002028;3.95e-14;12!UBERON:0004732;4.28e-13;13!UBERON:0005409;6.11e-13;22!UBERON:0001155;5.86e-09;9!UBERON:0004921;8.30e-09;33!UBERON:0000059;1.72e-07;11!UBERON:0002110;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,7.78e-28,6;UBERON:0006215,7.78e-28,6;UBERON:0002680,8.16e-19,9;UBERON:0001895,8.16e-19,9;UBERON:0010092,8.16e-19,9;UBERON:0000160,2.25e-16,17;UBERON:0002108,1.30e-15,4;UBERON:0004733,2.75e-14,12;UBERON:0002028,2.75e-14,12;UBERON:0007277,2.75e-14,12;UBERON:0004732,3.07e-13,13;UBERON:0003076,1.47e-11,15;UBERON:0003057,1.47e-11,15;UBERON:0005409,1.88e-11,25;UBERON:0001155,7.16e-09,9;UBERON:0000059,2.03e-07,11;UBERON:0002110,2.79e-07,3;UBERON:0006242,2.79e-07,3 | |||
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| ||
|short_description=p8@SEL1L3 | |short_description=p8@SEL1L3 | ||
}} | }} |
Latest revision as of 10:55, 17 September 2015
Short description: | p8@SEL1L3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SEL1L3_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_ENST00000264868_5end |
EntrezGene: | SEL1L3 |
HGNC: | 29108 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 7.78e-28 | 6 |
rhombic lip | 7.78e-28 | 6 |
regional part of metencephalon | 8.16e-19 | 9 |
metencephalon | 8.16e-19 | 9 |
future metencephalon | 8.16e-19 | 9 |
intestine | 2.25e-16 | 17 |
small intestine | 1.30e-15 | 4 |
segmental subdivision of hindbrain | 2.75e-14 | 12 |
hindbrain | 2.75e-14 | 12 |
presumptive hindbrain | 2.75e-14 | 12 |
segmental subdivision of nervous system | 3.07e-13 | 13 |
posterior neural tube | 1.47e-11 | 15 |
chordal neural plate | 1.47e-11 | 15 |
gastrointestinal system | 1.88e-11 | 25 |
colon | 7.16e-09 | 9 |
large intestine | 2.03e-07 | 11 |
gallbladder | 2.79e-07 | 3 |
gall bladder primordium | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.57e-10 | 2 |