FFCP PHASE1:Hg19::chr15:39884839..39884858,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7057 | |EntrezGene=7057 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11785 | |HGNC=11785 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-387bp_to_ENST00000484734_5end | |association_with_transcript=-387bp_to_ENST00000484734_5end | ||
|cluster_id=chr15:39884839..39884858,+ | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_29_at_THBS1_5end | |description=CAGE_peak_29_at_THBS1_5end | ||
|id=chr15:39884839..39884858,+ | |id=chr15:39884839..39884858,+ | ||
|ontology_enrichment_celltype=CL:0000057!3.52e-15!75;CL:0000055!1.39e-12!180;CL:0002371!1.50e-11!591;CL:0002139!2.49e-11!24;CL:0000548!1.80e-10!679;CL:0000004!1.80e-10!679;CL:0000255!1.80e-10!679;CL:0000144!1.84e-10!625;CL:0000222!1.85e-10!119;CL:0000012!4.48e-10!682;CL:0000220!1.68e-08!246;CL:0000115!1.91e-08!35;CL:0002321!3.36e-08!248;CL:0000071!7.12e-08!18;CL:0002546!7.12e-08!18;CL:0000359!1.77e-07!32;CL:0000063!5.89e-07!578;CL:0002334!7.07e-07!12 | |ontology_enrichment_celltype=CL:0000057!3.52e-15!75;CL:0000055!1.39e-12!180;CL:0002371!1.50e-11!591;CL:0002139!2.49e-11!24;CL:0000548!1.80e-10!679;CL:0000004!1.80e-10!679;CL:0000255!1.80e-10!679;CL:0000144!1.84e-10!625;CL:0000222!1.85e-10!119;CL:0000012!4.48e-10!682;CL:0000220!1.68e-08!246;CL:0000115!1.91e-08!35;CL:0002321!3.36e-08!248;CL:0000071!7.12e-08!18;CL:0002546!7.12e-08!18;CL:0000359!1.77e-07!32;CL:0000063!5.89e-07!578;CL:0002334!7.07e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.10e-10;23!CL:0002139;1.82e-07;24!CL:0002334;4.39e-07;12!CL:0002580;5.06e-07;3!CL:0000057;8.20e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.25e-17,76;CL:0002620,3.50e-10,23;CL:0002139,2.28e-07,24;CL:0002334,2.88e-07,12;CL:0002580,4.65e-07,3;CL:0000359,8.79e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;4.97e-09;5!DOID:450;4.97e-09;5!DOID:66;4.97e-09;5!DOID:423;4.97e-09;5!DOID:0080000;4.97e-09;5!DOID:11722;4.97e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.00e-09,5;DOID:450,5.00e-09,5;DOID:66,5.00e-09,5;DOID:423,5.00e-09,5;DOID:0080000,5.00e-09,5;DOID:11722,5.00e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0000055!2.77e-16!69;UBERON:0002049!3.74e-16!79;UBERON:0007798!3.74e-16!79;UBERON:0001981!1.08e-14!60;UBERON:0007500!1.08e-14!60;UBERON:0004537!1.08e-14!60;UBERON:0006965!1.08e-14!60;UBERON:0004872!6.51e-14!84;UBERON:0001637!7.85e-12!42;UBERON:0003509!7.85e-12!42;UBERON:0004572!7.85e-12!42;UBERON:0004535!2.93e-11!110;UBERON:0001009!6.12e-11!113;UBERON:0003914!1.99e-09!118;UBERON:0004573!1.14e-08!33;UBERON:0004571!1.14e-08!33;UBERON:0000468!2.39e-08!659;UBERON:0000487!4.31e-08!22;UBERON:0000490!4.45e-08!138;UBERON:0001986!7.12e-08!18;UBERON:0004638!7.12e-08!18;UBERON:0004852!7.12e-08!18;UBERON:0000467!7.82e-08!625;UBERON:0000480!1.01e-07!626;UBERON:0000947!2.53e-07!21;UBERON:0010191!2.53e-07!21;UBERON:0006914!3.56e-07!25;UBERON:0003102!4.21e-07!95;UBERON:0000914!8.35e-07!83;UBERON:0002329!8.35e-07!83;UBERON:0003077!8.35e-07!83;UBERON:0003059!8.35e-07!83;UBERON:0007282!8.35e-07!83;UBERON:0009618!8.35e-07!83;UBERON:0007285!8.35e-07!83;UBERON:0000486!9.93e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.14e-11;6!UBERON:0002358;2.14e-11;6!UBERON:0003684;2.14e-11;6!UBERON:0001178;2.14e-11;6!UBERON:0001637;3.74e-09;42!UBERON:0003509;3.74e-09;42!UBERON:0004572;3.74e-09;42!UBERON:0004573;3.10e-08;33!UBERON:0004571;3.10e-08;33!UBERON:0004457;2.99e-07;9!UBERON:0000042;2.99e-07;9!UBERON:0000947;3.44e-07;21!UBERON:0010191;3.44e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,4.42e-12,68;UBERON:0003688,1.59e-11,6;UBERON:0002358,1.59e-11,6;UBERON:0003684,1.59e-11,6;UBERON:0001178,1.59e-11,6;UBERON:0001637,2.01e-11,42;UBERON:0003509,2.01e-11,42;UBERON:0004572,2.01e-11,42;UBERON:0007500,3.97e-10,59;UBERON:0001981,3.97e-10,59;UBERON:0004537,3.97e-10,59;UBERON:0006965,3.97e-10,59;UBERON:0002049,1.44e-09,78;UBERON:0007798,1.44e-09,78;UBERON:0004573,8.45e-09,33;UBERON:0004571,8.45e-09,33;UBERON:0004872,1.82e-08,83;UBERON:0002097,3.50e-07,41;UBERON:0000947,3.72e-07,21;UBERON:0010191,3.72e-07,21;UBERON:0004923,7.41e-07,66;UBERON:0004871,8.76e-07,8 | |||
|phase1_expression=5.08699461957559,8.77812147953031,4.36958652697511,8.00586386825043,2.23480547213644,12.2127393374052,0,0,0,0.245733936501509,0,0.655324116390517,1.84636884759917,0.247532705920093,0.994192127183747,1.34465029290355,2.41077811209591,2.92124036154949,1.46379839637152,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,1.20326668482085,0,0,0,0,0.290796477559129,0.377875943688809,0,1.85943229524548,0,0,1.43846196161075,0.256160706529101,0,2.06847408441971,0.645484683583826,0,1.12945403725563,0,0,1.83650335422542,0,0.639337125799041,0.989553900560148,0.199463657621632,0,2.61188314765726,0,0,1.25624332628372,0,0,2.42159801053347,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0.50133791063589,0.289693037921647,1.5905718941022,2.43317435151318,0,0.221729397462564,0.087834785693126,0.0654895377488563,0.728590576585084,0,0,0,0,0,0,0,0.993812036833525,0,0.694281003215189,2.26123176769604,0.419499436209906,1.6507082516404,1.25396979922086,0.775250277507987,0.35576626268671,2.34304428935269,0.805658634218294,2.28081631715554,0.488124115096339,1.10298924103761,2.43042584364528,0.982297011124877,0.673588117878509,1.23872628531654,0,0.949265659568129,1.09921046358244,0,0,1.3082821564276,7.9515512271251,1.64619665163954,1.32409180813219,0.860509862246441,0.354668382198357,0.560677600142307,3.20246987189115,1.97334038733728,0,0.134710672069688,0.817309515567294,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0,0.826606249406124,2.37600571456411,5.19260551484969,0,0,0.505008341862199,0,0,0.877955241761676,3.67785354958824,3.30523729594513,0.794025282120147,3.40840307808838,3.63047560991565,2.11931901159562,2.40072876867522,1.44273540933814,4.63752972082133,2.04728541964749,2.19409231913646,0.876933046450788,2.01947019395292,2.39329736469978,2.10139873864455,3.55009592516614,0.906768884048762,2.03472710772585,0.386521706326594,1.63647672354501,0.573609190778008,0,0,0,0,0,0,0,3.85944562915731,1.38134921352481,0.464367928031979,0,0.118306800039844,0.337169380156203,0,0.110293972732394,0.217879444092406,0,0.269662616320329,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0.658501712451753,0,0.402115889646523,0.370353780634118,0.325808305310325,2.07986957055916,0,0,0,2.16549671641611,2.77791307545966,4.18559134916116,0,0,0,0,0,0.93733833986777,1.51183915378974,0.992425680696705,0.53735113621709,0.290633938513962,1.15014803749563,0,0,0,0,0,0,0,0,0,0.616964956219941,0,0,0,0,0.1466765716419,0.387815147273333,0,0,0.797814349754612,1.04007436911366,0,0,0,0.57191197463259,0,0,0,0,0,0,0,0,0,0,0,1.19812427745791,0,0,0.434343920002738,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32753378449291,6.95873056308931,4.73107245101804,1.99140405487612,0.601892199455438,0,0,0,0.184369168541703,1.73767228936166,0,0,0,0.215714200818617,0,0.303127571446259,3.32870879020994,0,3.72161711728165,9.36118037057181,10.9457436828899,1.92208723883551,5.11707249066703,7.56013429374955,2.96836132889982,0.771048469013278,0.532685175939381,0.0821271560138091,0,0.232420756919918,0.120859449591622,2.20557117333613,0.184161977871793,0.459257792658427,0,0.655622074797121,0,0,0,0,0,2.27466768141793,0.170093705276516,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0.137836572484531,0.107420244868274,0.580066775656914,0.0852266274161009,0,0.991709492165869,1.72971060628596,3.31793052485919,0.10115778085555,0.464845549297286,3.1481234683064,0,0.308033580176089,1.06461206063404,0,0.55597265731176,0,0,0.316379424718726,0.38126038784765,0,0,0,1.56989728039846,0.539617372749944,0.274537029736055,0.117812402345686,0.202182481573316,0,1.68503382495592,0,0.487426979262569,1.05650146756755,0.272999822815972,0.141405431953713,0,0,2.65375590096488,3.94605796728386,0,0,0.811641507850816,2.478587984798,1.40847801266121,0.430234056612155,0.196498082026242,1.07001315444375,0,0.422215270595328,0,0.379473173765715,0,0.577332676353072,0,1.08890984861323,0,1.29151611801369,1.68471475667626,1.33029046061003,2.75668080248351,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,2.14870036263921,1.18785872333055,3.99308912729002,0,0,0.222617410045812,0,0,0,0,0,0.102268682502155,0,5.59871257791253,0.898683511473268,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0.173624994933292,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0.0769502585037971,0.569710279235006,0,0,0,1.27600463892768,0.457987967009312,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.252746318513952,0,0,0,0,0,0,0,0.277349346026277,0,0.195984794828755,0.435296032902013,0,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0.240476460754601,0,0,0,0,0,0,0,0.235694034616795,0,0,1.01998217636322,0,0,0,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| ||
|short_description=p29@THBS1 | |short_description=p29@THBS1 | ||
}} | }} |
Latest revision as of 11:13, 17 September 2015
Short description: | p29@THBS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_THBS1_5end |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | -387bp_to_ENST00000484734_5end |
EntrezGene: | THBS1 |
HGNC: | 11785 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.25e-17 | 76 |
skin fibroblast | 3.50e-10 | 23 |
endothelial cell of vascular tree | 2.28e-07 | 24 |
preadipocyte | 2.88e-07 | 12 |
preadipocyte of the breast | 4.65e-07 | 3 |
vascular associated smooth muscle cell | 8.79e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
vessel | 4.42e-12 | 68 |
omentum | 1.59e-11 | 6 |
peritoneum | 1.59e-11 | 6 |
abdominal cavity | 1.59e-11 | 6 |
visceral peritoneum | 1.59e-11 | 6 |
artery | 2.01e-11 | 42 |
arterial blood vessel | 2.01e-11 | 42 |
arterial system | 2.01e-11 | 42 |
epithelial tube open at both ends | 3.97e-10 | 59 |
blood vessel | 3.97e-10 | 59 |
blood vasculature | 3.97e-10 | 59 |
vascular cord | 3.97e-10 | 59 |
vasculature | 1.44e-09 | 78 |
vascular system | 1.44e-09 | 78 |
systemic artery | 8.45e-09 | 33 |
systemic arterial system | 8.45e-09 | 33 |
splanchnic layer of lateral plate mesoderm | 1.82e-08 | 83 |
skin of body | 3.50e-07 | 41 |
aorta | 3.72e-07 | 21 |
aortic system | 3.72e-07 | 21 |
organ component layer | 7.41e-07 | 66 |
somatic layer of lateral plate mesoderm | 8.76e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.00e-09 | 5 |
myotonic disease | 5.00e-09 | 5 |
muscle tissue disease | 5.00e-09 | 5 |
myopathy | 5.00e-09 | 5 |
muscular disease | 5.00e-09 | 5 |
myotonic dystrophy | 5.00e-09 | 5 |